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KJC3_009713-T1, KJC3_009713-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009713-T1
Unique NameKJC3_009713-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1203110..1203972+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009713-T1 ID=KJC3_009713-T1|Name=KJC3_009713-T1|organism=Aspergillus niger KJC3|type=mRNA|length=863bp|location=Sequence derived from alignment at ch7:1203110..1203972+ (Aspergillus niger KJC3)
ATGCCGGCCGCCAGCTCTGCCAGCTCCACCGCAAACGGTCGCTCCAGCCG
ATCTGGACCTTCCAAAAGGATCGTTGTCCTCAAGCTGTCTACCGATCTGC
TGAGCCAGTTCGTGACACCACCGCCCGAGGGAAAGGACAAGAAGAGCAAA
CGGGGTAGCGTCAGCAATGCCGACTCGCCCGTCAAGATCCAGGAGCCTTC
GTCCCCGGCTTCCTCGTCCGCCGAACTACCTCTCCCTCCCTCGTCCGTGG
ACAATGCCTCCGATGCTGCGTCCACGCCCGCCGCAGGCACCTCGGCTGCA
GACACACCTCGTCGCAAGGGCGTTCCGGGCCCTAAGCCGGGCACCAAACG
AGGCCTCAACCAGACCGGCGAAACCACCCCGAAGCCGAGAGGCAAGCCAG
GTCCCAAGAAGAAGCCCCGACTGTATGTTCCTCCATCCCGACCAATTGAC
CATGGGTGCATTTGCTAACTGCTTCTAGTGATGACGGCACCGTCGACACT
GCCAAGTTGGTGGCAGCTCACAAGCTCGGTCCGAAGGCCAACTTGGGTGC
AATCAATGCCGGTCTACGTGCTCTGGATCGCACCGGGTCCCCATGCCGTC
GCTGGGAGCGTAAGCCTCTTCAGCTGAAGAGTTTCACCGGCATCCAATGG
ATGCTGCCGTCTTGGCGTACTCCTCGCCCGTTGAAGTCCGAGGAGAACGA
CGAGGGTCAGAGCATGGCTCTCGAGACTGGCGACAGCGACAGCAAGGCCA
ACCAGAGTGCCAGTGGCGTCCCCAGCGAGAAGAGCACTGGCGACGGTGAA
CTCACTCCCGCTCCGCCTAACCTGACGGAAGCGTCTTCTCCCGCCATCGC
CATGACTGCTTGA
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Coding sequence (CDS) from alignment at ch7:1203110..1203972+

>KJC3_009713-T1 ID=KJC3_009713-T1|Name=KJC3_009713-T1|organism=Aspergillus niger KJC3|type=CDS|length=1614bp|location=Sequence derived from alignment at ch7:1203110..1203972+ (Aspergillus niger KJC3)
ATGCCGGCCGCCAGCTCTGCCAGCTCCACCGCAAACGGTCGCTCCAGCCG
ATCTGGACCTTCCAAAAGGATCGTTGTCCTCAAGCTGTCTACCGATCTGC
TGAGCCAGTTCGTGACACCACCGCCCGAGGGAAAGGACAAGAAGAGCAAA
CGGGGTAGCGTCAGCAATGCCGACTCGCCCGTCAAGATCCAGGAGCCTTC
GTCCCCGGCTTCCTCGTCCGCCGAACTACCTCTCCCTCCCTCGTCCGTGG
ACAATGCCTCCGATGCTGCGTCCACGCCCGCCGCAGGCACCTCGGCTGCA
GACACACCTCGTCGCAAGGGCGTTCCGGGCCCTAAGCCGGGCACCAAACG
AGGCCTCAACCAGACCGGCGAAACCACCCCGAAGCCGAGAGGCAAGCCAG
GTCCCAAGAAGAAGCCCCGACTTGATGACGGCACCGTCGACACTGCCAAG
TTGGTGGCAGCTCACAAGCTCGGTCCGAAGGCCAACTTGGGTGCAATCAA
TGCCGGTCTACGTGCTCTGGATCGCACCGGGTCCCCATGCCGTCGCTGGG
AGCGTAAGCCTCTTCAGCTGAAGAGTTTCACCGGCATCCAATGGATGCTG
CCGTCTTGGCGTACTCCTCGCCCGTTGAAGTCCGAGGAGAACGACGAGGG
TCAGAGCATGGCTCTCGAGACTGGCGACAGCGACAGCAAGGCCAACCAGA
GTGCCAGTGGCGTCCCCAGCGAGAAGAGCACTGGCGACGGTGAACTCACT
CCCGCTCCGCCTAACCTGACGGAAGCGTCTTCTCCCGCCATCGCCATGAC
TGCTTGAATGCCGGCCGCCAGCTCTGCCAGCTCCACCGCAAACGGTCGCT
CCAGCCGATCTGGACCTTCCAAAAGGATCGTTGTCCTCAAGCTGTCTACC
GATCTGCTGAGCCAGTTCGTGACACCACCGCCCGAGGGAAAGGACAAGAA
GAGCAAACGGGGTAGCGTCAGCAATGCCGACTCGCCCGTCAAGATCCAGG
AGCCTTCGTCCCCGGCTTCCTCGTCCGCCGAACTACCTCTCCCTCCCTCG
TCCGTGGACAATGCCTCCGATGCTGCGTCCACGCCCGCCGCAGGCACCTC
GGCTGCAGACACACCTCGTCGCAAGGGCGTTCCGGGCCCTAAGCCGGGCA
CCAAACGAGGCCTCAACCAGACCGGCGAAACCACCCCGAAGCCGAGAGGC
AAGCCAGGTCCCAAGAAGAAGCCCCGACTTGATGACGGCACCGTCGACAC
TGCCAAGTTGGTGGCAGCTCACAAGCTCGGTCCGAAGGCCAACTTGGGTG
CAATCAATGCCGGTCTACGTGCTCTGGATCGCACCGGGTCCCCATGCCGT
CGCTGGGAGCGTAAGCCTCTTCAGCTGAAGAGTTTCACCGGCATCCAATG
GATGCTGCCGTCTTGGCGTACTCCTCGCCCGTTGAAGTCCGAGGAGAACG
ACGAGGGTCAGAGCATGGCTCTCGAGACTGGCGACAGCGACAGCAAGGCC
AACCAGAGTGCCAGTGGCGTCCCCAGCGAGAAGAGCACTGGCGACGGTGA
ACTCACTCCCGCTCCGCCTAACCTGACGGAAGCGTCTTCTCCCGCCATCG
CCATGACTGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031011Ino80 complex
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009713KJC3_009713Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009713-T1.exon1KJC3_009713-T1.exon1Aspergillus niger KJC3exon
KJC3_009713-T1.exon2KJC3_009713-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009713-T1.cdsKJC3_009713-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009713-T1KJC3_009713-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013175
DBxrefPFAM:PF08193
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1203110..1203972 +
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