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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1255506..1256789- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009729-T2 ID=KJC3_009729-T2|Name=KJC3_009729-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1284bp|location=Sequence derived from alignment at ch7:1255506..1256789- (Aspergillus niger KJC3) GAGTGCGCATTGCTCTTGTCATTGTTTACCAGCCGCTTGCAAACTTGAGT
TTCTTGAAGTTTTGTGTCGTTCATATTTAATTACCTTGACACTTGAGTTT
AACGAGCGTGTTTTACAATCATGTCATCTGCAACAAAAGCATCTAGGATT
GGGGAAGAGTAAGTTGTTCATTCGCTTCACTTGACCAGTAACCCCTTACT
AACCTCCTGACCTTGACAGGCTGTGGAAGTCAGTAAGCTGCATGCGTATA
GTTGGCGCTCGAACACCCCTCAGGAGACGAGCGAAGCCGGCTTGGGATGG
ACAGGCAACTGACATACACCCGACATTACTAGGACGAGAGTTGACAAAGT
GAACGCCGAGTTGGTAACATTAACTTACGGTACAATTGTCGCGCAACTTT
GCCAGGACTACGATGGAAATTACCAAGAAGTGAACAAGCAACTGGAGAAG
ATGGGTTACAATATTGGAATGCGACTTATCGAGGACTTTTTGGCCAAGTC
GGGCGTCGGCCGATGTGCTAATTTCCGGGAAACGGCGGATATGATCGCAA
AGGTATGTTGAGGCCAACAGGTGGAGTAATTGGTCGAAAGTATATGGGCT
TCTGTGGGCTGACGAGTTTAATGCCCACTGCAGGTTGGGTTCAGGATCTT
CCTCAACATCGCACCCACCGTCACCAACTGGACGAGTGACAACAACCAAT
TCTCTCTCATATTTGAAGAAAACCCGTTGGCAGATTTTGTTGAGTTGCCC
GATGACGGACGGGCTCAAGATGAGCTGTGGTTTTCCAATATCCTCTGTGG
AGTTCTGCGGGGTGCATTGGAGATGGTAAGACGGCGTACTGCAGGGAGTT
GATCTGTTCTCTGCTAGCCACTTCCATGCATGTATTTGTGCTAATTCTGG
GAACAGGTGCAAATGCAGATCGAGGCGCATTTTGTGAGCGACGTTTTGCG
GGGCGATGACACAACGGAAATGCGGGTGTCACTTGTACGGTACATTGAGG
ATGAGATGCCACCCGATGAGGAGTAATGGTGCCAGCCGTATGGTTCTGGG
ATTGTTTATACAAGTAGAGGCGTCTGGTGTTTTGAGGGTTTTAACCGCCG
ATTTGGAGCTGCAGTTACCGATGAATATTATCTCGATTATGAGTTATGAT
TGATACTGAGTCTTGCATCTTGTTTTTTCTTTTTTTCCATTGTCCTATAG
TTCTCGCACTAAACCGCGTTTACATAGAAGGTCTCCTGCAGGTCAACAAT
GCCAGACACAATACCATTGTCACAGACGGACGAG back to topCoding sequence (CDS) from alignment at ch7:1255506..1256789- >KJC3_009729-T2 ID=KJC3_009729-T2|Name=KJC3_009729-T2|organism=Aspergillus niger KJC3|type=CDS|length=1242bp|location=Sequence derived from alignment at ch7:1255506..1256789- (Aspergillus niger KJC3) GTGCAAATGCAGATCGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGA TGACACAACGGAAATGCGGGTGTCACTTGTACGGTACATTGAGGATGAGA TGCCACCCGATGAGGAGTAAGTTGGGTTCAGGATCTTCCTCAACATCGCA CCCACCGTCACCAACTGGACGAGTGACAACAACCAATTCTCTCTCATATT TGAAGAAAACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGACGGACGGG CTCAAGATGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGT GCATTGGAGATGATGGGTTACAATATTGGAATGCGACTTATCGAGGACTT TTTGGCCAAGTCGGGCGTCGGCCGATGTGCTAATTTCCGGGAAACGGCGG ATATGATCGCAAAGGTGCAAATGCAGATCGAGGCGCATTTTGTGAGCGAC GTTTTGCGGGGCGATGACACAACGGAAATGCGGGTGTCACTTGTACGGTA CATTGAGGATGAGATGCCACCCGATGAGGAGTAAGTTGGGTTCAGGATCT TCCTCAACATCGCACCCACCGTCACCAACTGGACGAGTGACAACAACCAA TTCTCTCTCATATTTGAAGAAAACCCGTTGGCAGATTTTGTTGAGTTGCC CGATGACGGACGGGCTCAAGATGAGCTGTGGTTTTCCAATATCCTCTGTG GAGTTCTGCGGGGTGCATTGGAGATGATGGGTTACAATATTGGAATGCGA CTTATCGAGGACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTAATTT CCGGGAAACGGCGGATATGATCGCAAAGGTGCAAATGCAGATCGAGGCGC ATTTTGTGAGCGACGTTTTGCGGGGCGATGACACAACGGAAATGCGGGTG TCACTTGTACGGTACATTGAGGATGAGATGCCACCCGATGAGGAGTAAGT TGGGTTCAGGATCTTCCTCAACATCGCACCCACCGTCACCAACTGGACGA GTGACAACAACCAATTCTCTCTCATATTTGAAGAAAACCCGTTGGCAGAT TTTGTTGAGTTGCCCGATGACGGACGGGCTCAAGATGAGCTGTGGTTTTC CAATATCCTCTGTGGAGTTCTGCGGGGTGCATTGGAGATGATGGGTTACA ATATTGGAATGCGACTTATCGAGGACTTTTTGGCCAAGTCGGGCGTCGGC CGATGTGCTAATTTCCGGGAAACGGCGGATATGATCGCAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0030008 | TRAPP complex |
Vocabulary: Biological Process
Term | Definition |
GO:0048193 | Golgi vesicle transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009729-T2.utr3p1 | KJC3_009729-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR024096 |
DBxref | InterPro:IPR007194 |
DBxref | InterPro:IPR016721 |
DBxref | PFAM:PF04051 |
Product | variant 2 |
Product | Trafficking protein particle complex subunit 3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:1255506..1256789 - |
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