|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1273285..1275689+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009736-T1 ID=KJC3_009736-T1|Name=KJC3_009736-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2405bp|location=Sequence derived from alignment at ch7:1273285..1275689+ (Aspergillus niger KJC3)
GCCCGCCAGCGAGACCCGCCAAATGCATGCCTGATGTCACACCACCAGCA
CACTATCTCTTCCGTACTTGATCTGCCCAGCCTTATATTACTCTATATCA
CTCTTAGGCACCAACTACACCCTCACCCCTCGACATCCTCGCAGACACGC
CATTCAAAATCATTGCAGCATCTTTCGTCACTACGGAGGACAGATACGGA
TCCCGGTATCTGGGTTGTTCCCAAAACAGCACGCATCACGTGGCAAAGCA
CGGGCCAACTCGCTTAACATTCCGCCTATTTATTTCGGCTTGAGGCTATT
TTGCTCCTCCGGCTCACTCGCCCTTTGATGTTCTCATTGCGCACTTCTGC
TCATTGCAGAAGTGCCTTGCCAGATCATCTGATGTACAGATATCTATCAC
ACTGTAACACCTAACCCTGACTCATGATGTCTCCTGCACCCATCGCTGCA
GAAATGCAGCAAGACCAGCGGCTGGAAACCCTGGCCAGAGCTTTCGAAGC
TCTGTTGCTCACCACCCAACAACTGAGTTGCAAGGAGAAGAGCTTACAGC
AAAGGCTGAAATATGCCTCCGACGAGGTAAATATTCCCTCATCTTATCTC
CCTTCTTCCCAACCCCCCCCTGCTGTCTCAAAGGACGAGAAAAATTGATT
AGCTCTAGATCAGGAGTCGCATCTGCGGCGGTGACGGATAAGTCATGTAT
TATCTGATGAGACTTGACACACTTGCACTATTTTACGTCTATGTATATTT
GAATACATATGCTAACGTGCTCAGTACTCGAAACTCGCAGGAAAGCTCCC
CGGTGGAGTCGATGGTCATACGAAAGTCGTCGCGGATAAAATCCTCGGTC
GTTATACGGAATACGATCACAAACCCAAACCAAACATAAAACCTCCGGAC
GTAGTAAAGGCGCTGGCCGAGTCTGGAAACGTAGGAGATCTTGCCCTGAC
CGCTATAACGGAAGGGCTGACATGTTATCAATCTATCATACCACCACACG
AGTCCAGGCAGCTCTCGGAGTTCGACTCTTGCCTCGTGGCGACGAGAGCC
GGAGTGCCTGCTCCCCTAGAAAAAGACTTCACTACCAAGGGCACGCAAGG
AAGTTTGCGTTGTCCTTTTGCGAAGCATAACAATAAGACCTCTGAGAATG
GGGTGTCCAATGGGACGCACAATTCATATAAGGATCAGAACGGGGATGCG
TGCGGACATGCCGATCTAGACCCCATCAAGGCCGAGCAGAGTGATAAACG
CTCGAGTCGGGCTCCTTCGACGCGGTCTTCGGCCACTCGCTGCCCGGTTT
CTCGCTGTCCCATAAGGTATCTAGACCAGCATAGTCCGGAGGAGATCGCC
GACTATGTTGAGAGGCACAAGCATGAGATCCCTAGAAGTCATGCTATTTG
TGTCCAACGGTACCAGCGGGACGGTCAGACCATGCGGCAGCTTGATGCAA
AATACGGTAGCCTTATCAATATGATCCAGGGCTTGTCTGCCAAACATAAA
GCATTCCTACCAGAGCCGAGTCAAAATGGCACGGCACCCTCTAGCTCGTC
CGCAGAAAGAGTGGAGAAATGGGCACAGGAAGTTGACCTGAAGTCGGACA
TGCATCCTCCCATTAAAGAAGAGCAGGAGGAAGAGGCGGCGGCCGAACAA
GAGGATGAAGAGAGAAAGGGCCATTTCGACCGTCCCTTGCGTGAAGTCCG
TGTTGGCGAATCCCCAAGCCGGCCCTGGGGTATCCCTGTTCCGGTGTCGC
CTCTACCTCCAACCGCATCACCCCCTCAATCCCCTCCGCCTGCACCGGTT
GCAACCTCAATCGATGCGGTAACCACCAAGCTTCCCAATGCCGCGCCTGC
AGGTTTGTCCTCGATGCCGCCGCCTGGTAACACGGCTCCGGCTCCTCCCG
GCAGTGCGCCCAAGAAGGGTCGATGCCCCTTCGGACATGGTGCGCCCTCC
GGTGACAAACCGCCACCCAAGATGGAGACCATACCTACGCCTGCTAAGGT
GGAAAAGGTCTACGGACCTGCTGAGCGGAAGGATGATAGACCACCCGATG
ATCCTGCAATTCCTTCGAATAAACCACCAGCCAACATTGTGTTCAACGGG
CCTGTCTTCTTTGGGTTTTCCGCAGATCAGACAGCTGCGTTCATGCAGCA
GTTGAGCAATCTTGGGGCGAAGGGGTTATCCTAGAAAGTGGTTGACCAGA
TGAGATGATTTGATTGTTCCTGGCTTGCATATTCGCGTTGATATCCCCCA
CTTGTTGCTTGTATACTGTATCACGATGCTATGACTCCCTCCTGCTCATG
ATGATCCACATCCTCCATACTTGGACTATGATTACCGCACTGCATTCCAT
TTATACACTCGTGTCAACACTAGCCTAGCCTGATAATAATATTCTATTAT
ACGCC back to topCoding sequence (CDS) from alignment at ch7:1273285..1275689+ >KJC3_009736-T1 ID=KJC3_009736-T1|Name=KJC3_009736-T1|organism=Aspergillus niger KJC3|type=CDS|length=3126bp|location=Sequence derived from alignment at ch7:1273285..1275689+ (Aspergillus niger KJC3)
ATGATGTCTCCTGCACCCATCGCTGCAGAAATGCAGCAAGACCAGCGGCT
GGAAACCCTGGCCAGAGCTTTCGAAGCTCTGTTGCTCACCACCCAACAAC
TGAGTTGCAAGGAGAAGAGCTTACAGCAAAGGCTGAAATATGCCTCCGAC
GAGTACTCGAAACTCGCAGGAAAGCTCCCCGGTGGAGTCGATGGTCATAC
GAAAGTCGTCGCGGATAAAATCCTCGGTCGTTATACGGAATACGATCACA
AACCCAAACCAAACATAAAACCTCCGGACGTAGTAAAGGCGCTGGCCGAG
TCTGGAAACGTAGGAGATCTTGCCCTGACCGCTATAACGGAAGGGCTGAC
ATGTTATCAATCTATCATACCACCACACGAGTCCAGGCAGCTCTCGGAGT
TCGACTCTTGCCTCGTGGCGACGAGAGCCGGAGTGCCTGCTCCCCTAGAA
AAAGACTTCACTACCAAGGGCACGCAAGGAAGTTTGCGTTGTCCTTTTGC
GAAGCATAACAATAAGACCTCTGAGAATGGGGTGTCCAATGGGACGCACA
ATTCATATAAGGATCAGAACGGGGATGCGTGCGGACATGCCGATCTAGAC
CCCATCAAGGCCGAGCAGAGTGATAAACGCTCGAGTCGGGCTCCTTCGAC
GCGGTCTTCGGCCACTCGCTGCCCGGTTTCTCGCTGTCCCATAAGGTATC
TAGACCAGCATAGTCCGGAGGAGATCGCCGACTATGTTGAGAGGCACAAG
CATGAGATCCCTAGAAGTCATGCTATTTGTGTCCAACGGTACCAGCGGGA
CGGTCAGACCATGCGGCAGCTTGATGCAAAATACGGTAGCCTTATCAATA
TGATCCAGGGCTTGTCTGCCAAACATAAAGCATTCCTACCAGAGCCGAGT
CAAAATGGCACGGCACCCTCTAGCTCGTCCGCAGAAAGAGTGGAGAAATG
GGCACAGGAAGTTGACCTGAAGTCGGACATGCATCCTCCCATTAAAGAAG
AGCAGGAGGAAGAGGCGGCGGCCGAACAAGAGGATGAAGAGAGAAAGGGC
CATTTCGACCGTCCCTTGCGTGAAGTCCGTGTTGGCGAATCCCCAAGCCG
GCCCTGGGGTATCCCTGTTCCGGTGTCGCCTCTACCTCCAACCGCATCAC
CCCCTCAATCCCCTCCGCCTGCACCGGTTGCAACCTCAATCGATGCGGTA
ACCACCAAGCTTCCCAATGCCGCGCCTGCAGGTTTGTCCTCGATGCCGCC
GCCTGGTAACACGGCTCCGGCTCCTCCCGGCAGTGCGCCCAAGAAGGGTC
GATGCCCCTTCGGACATGGTGCGCCCTCCGGTGACAAACCGCCACCCAAG
ATGGAGACCATACCTACGCCTGCTAAGGTGGAAAAGGTCTACGGACCTGC
TGAGCGGAAGGATGATAGACCACCCGATGATCCTGCAATTCCTTCGAATA
AACCACCAGCCAACATTGTGTTCAACGGGCCTGTCTTCTTTGGGTTTTCC
GCAGATCAGACAGCTGCGTTCATGCAGCAGTTGAGCAATCTTGGGGCGAA
GGGGTTATCCTAGATGATGTCTCCTGCACCCATCGCTGCAGAAATGCAGC
AAGACCAGCGGCTGGAAACCCTGGCCAGAGCTTTCGAAGCTCTGTTGCTC
ACCACCCAACAACTGAGTTGCAAGGAGAAGAGCTTACAGCAAAGGCTGAA
ATATGCCTCCGACGAGTACTCGAAACTCGCAGGAAAGCTCCCCGGTGGAG
TCGATGGTCATACGAAAGTCGTCGCGGATAAAATCCTCGGTCGTTATACG
GAATACGATCACAAACCCAAACCAAACATAAAACCTCCGGACGTAGTAAA
GGCGCTGGCCGAGTCTGGAAACGTAGGAGATCTTGCCCTGACCGCTATAA
CGGAAGGGCTGACATGTTATCAATCTATCATACCACCACACGAGTCCAGG
CAGCTCTCGGAGTTCGACTCTTGCCTCGTGGCGACGAGAGCCGGAGTGCC
TGCTCCCCTAGAAAAAGACTTCACTACCAAGGGCACGCAAGGAAGTTTGC
GTTGTCCTTTTGCGAAGCATAACAATAAGACCTCTGAGAATGGGGTGTCC
AATGGGACGCACAATTCATATAAGGATCAGAACGGGGATGCGTGCGGACA
TGCCGATCTAGACCCCATCAAGGCCGAGCAGAGTGATAAACGCTCGAGTC
GGGCTCCTTCGACGCGGTCTTCGGCCACTCGCTGCCCGGTTTCTCGCTGT
CCCATAAGGTATCTAGACCAGCATAGTCCGGAGGAGATCGCCGACTATGT
TGAGAGGCACAAGCATGAGATCCCTAGAAGTCATGCTATTTGTGTCCAAC
GGTACCAGCGGGACGGTCAGACCATGCGGCAGCTTGATGCAAAATACGGT
AGCCTTATCAATATGATCCAGGGCTTGTCTGCCAAACATAAAGCATTCCT
ACCAGAGCCGAGTCAAAATGGCACGGCACCCTCTAGCTCGTCCGCAGAAA
GAGTGGAGAAATGGGCACAGGAAGTTGACCTGAAGTCGGACATGCATCCT
CCCATTAAAGAAGAGCAGGAGGAAGAGGCGGCGGCCGAACAAGAGGATGA
AGAGAGAAAGGGCCATTTCGACCGTCCCTTGCGTGAAGTCCGTGTTGGCG
AATCCCCAAGCCGGCCCTGGGGTATCCCTGTTCCGGTGTCGCCTCTACCT
CCAACCGCATCACCCCCTCAATCCCCTCCGCCTGCACCGGTTGCAACCTC
AATCGATGCGGTAACCACCAAGCTTCCCAATGCCGCGCCTGCAGGTTTGT
CCTCGATGCCGCCGCCTGGTAACACGGCTCCGGCTCCTCCCGGCAGTGCG
CCCAAGAAGGGTCGATGCCCCTTCGGACATGGTGCGCCCTCCGGTGACAA
ACCGCCACCCAAGATGGAGACCATACCTACGCCTGCTAAGGTGGAAAAGG
TCTACGGACCTGCTGAGCGGAAGGATGATAGACCACCCGATGATCCTGCA
ATTCCTTCGAATAAACCACCAGCCAACATTGTGTTCAACGGGCCTGTCTT
CTTTGGGTTTTCCGCAGATCAGACAGCTGCGTTCATGCAGCAGTTGAGCA
ATCTTGGGGCGAAGGGGTTATCCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009736-T1.utr5p1 | KJC3_009736-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009736-T1.utr3p1 | KJC3_009736-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1273285..1275689 + |
|
