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KJC3_009773-T1, KJC3_009773-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009773-T1
Unique NameKJC3_009773-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1479908..1482955-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009773-T1 ID=KJC3_009773-T1|Name=KJC3_009773-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3048bp|location=Sequence derived from alignment at ch7:1479908..1482955- (Aspergillus niger KJC3)
CCGAAACCTCGTCGACGAAAAAGATTCCCCGAACCCCCGAAAAAAAGAGT
GACGAGCCTCCCCATCGGCTGTTCTTTCTTCCTTTGATACCAATTGTCTA
ACAGACCGGTATTTCCGCGAAGTAATTCTCCTTTCCTTTACTCTTGCTTT
TTCTTCTCCCCCTTCTTCTTCTTATATTATATATCTCACAGTCCGGCCAT
GGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCC
TTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCCCTCAATTCTT
CGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGTCACTGTCCG
TGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGA
CTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGCGTATGGCACC
CTGTCCCCCGTGTGAATTGGCTGCAGTCCATGGATCGCATATCTGAATTC
GCTCTCCTATAGTTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTC
CCAAGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTCTC
GCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTGTGAGTTCCCCGAT
TTGTGACCTTTGTATACCCCTTTGGATATTTAAGGTTCATCAGATGCAAA
GTGCACAGTATACTAAGACTTGCTGTCGATATTTAGTGCGAGTTCATGAC
CTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACTCTGCTGCCA
AGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACATCACCTTCCGT
GGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGACTA
CTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGA
GCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTAAC
CCCGTCGTTGTTCTTGAGAACGAGTACGTGGCCCCCGTGGAAGTATCGGA
GTATTTGTGGAATGTTTTTGAACCTGACAATAATTGCATAGGCTGCTGTA
CGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTC
TTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGACTTGACCATT
GTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGCTGCCCAGCT
CAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTCGTTCCGTCA
AGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAGACTGGTCGC
ATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGAT
CCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTGCTCCTGCCG
TCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAG
AACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGCTGCCAAGCT
GTTGCGCCTGTAAAGGATGAGCCGTTGTGTATGAACCGACGGTGAAGAAA
ATCTGAATTAATAAAATCATGTGTCTAGTACCCTATCATTGTTACAGCCA
TTTCTCCTATTTCCTCATATTACCTCGTTCTCCCACTTTCCTGATCTTGT
ACGACTATACAACACAATCAACGTTATTCTGCATTCTTAGAGAAGCTAAT
GTGCTCGGGCATGGTTGTATTCTTTCGTAACATCTTAAAATCGCATCTGG
CTTTGCTCATGTTTGGCGTATGCCACCACGAACGAGCCCGCAGTGAATTT
GGGCTTGCTCCTCCGGTGCAGTTGCTATTCCCAGGTGATCGACCTCGGCA
TAGGAGAAAGACGGTTGAAAGCTACCTCCATGCCTGTAATGTCTTGCTTC
TGGATAGCATTCTCCACATACGTAATGGTCTCATCAAGTCTTGAGGAAAG
GAAACAGGGATAGTGATCGGCCATTTGACGTCACAGCACATAGTCGTTGT
GATCGCCATATCCGTACTGTGCTCCGCGTGGTGCTCCTTCAGATAAAGGA
TGTCTCTAAGGGAACGTTCCTAGCACCAGCGCATGCAGGGGAACAACCGG
TGGGATTTCGAGGATTGTAATACCCCCCATTCATGCCTCTATTCCGGTCG
TATTCTTCATCTGTATCGCTCTCCGCCTGATCAACCTGCATGTTTTCGCG
CTTTGACGATTGGCTCCGAGCGCGCCGCAGACTCTCATCATCTGCTTCTG
GAAGTTCACTGTCTTCATCGTCACCGCCTAGGACGTTTTTCTTCGTGGGA
GCAGCAGGAGCCACAGGTCCTTTGACAGTGGTAAAGGAACTTTTGAACCC
CCCCTTTTTGAACCCTCCCCCACCTCCCGTACTGCTCCCTACTCCAGATC
CAGTTCCCGTAGTCGATAATGAGGCAGCTTTGGGGGTGTCGAGGACCCTT
AACCCGGCCTCGGCGTCAGCCTTCCGTTCGGCTCTTCTGGCCTTCTCGGC
GGCATTGGGGTCCCGAGATAATTGTTTGAGGTCTTGAAGACGCTTGCGGT
GTTGATGGTCATATGAAGAAATATGAGCCTCATATTCTGGATGGCGAGAA
TAGGACTTGTTGCAGAGCGTGCAGGTGAAGGAGCTCAGAGCGGAACGCGC
AGATTCGGTCTAGTTTGAGATGCGGTGGTCCTTAGTTAGCCTGGAAGCAC
GAGTCTTCATATCTCTGAAACTCATTAATCTAAGCCCTGAATCGCACCTT
GGGAGTGGGATTGGTAAAGCCTCGCTGTATATAGAGACGCATTGGTCAGC
CTTGCAAGATATGGGAACTTGTTGCTATGGAAATATATAGCATCTTTAAT
AGGGGGGATGTTCGGAATCTGGGCACTTGCAGGCGCCATCGTTCTATGAG
GAGTACGCAGAATCGCTTTGAAACGTTTGCCGCAAACAGCGAAAAAGCGT
GTGTACGGGTCTGGGGGTTTGCTGCTTGCTCGCTGAGCAATGATGGTT
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Coding sequence (CDS) from alignment at ch7:1479908..1482955-

>KJC3_009773-T1 ID=KJC3_009773-T1|Name=KJC3_009773-T1|organism=Aspergillus niger KJC3|type=CDS|length=4500bp|location=Sequence derived from alignment at ch7:1479908..1482955- (Aspergillus niger KJC3)
GCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATG
ACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGAC
TTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGC
TGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTC
GTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAG
ACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTC
CTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTG
CTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTT
GGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGC
TGCCAAGCTGTTGCGCCTGTAATGCGAGTTCATGACCTTCAACTTCGCCA
TGCAGGCTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATG
TCTGGTGGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTT
CGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACG
GCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCC
AAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCT
TGAGAACGATTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCA
AGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTCTCGCC
GTCGGTGCTGCTCTTGCTGGACTGCACCCCATTATGGCTGCTCCCCGACT
TTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCC
TTCGCCCTCAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATAT
GCTACGGAATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGA
GGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAG
AGGAGGTTGCGCAGTACAACGGAGCGCTGCTGTACGGTCAGGCTTTCCCT
ATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGC
CAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCCGCT
GCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTACGGT
GTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGA
GACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCGAGT
CCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCCATG
GAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGC
CGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCCCCC
AGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAATGC
GAGTTCATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAA
CTCTGCTGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACA
TCACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCAC
TCCCAGGACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGT
CGCTCCCTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTC
GCGATCCTAACCCCGTCGTTGTTCTTGAGAACGATTACAAGGTAACGAGG
GGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACCCCCATCAC
GGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGC
ACCCCATTATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTT
TCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCC
CTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGG
TCACTGTCCGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGC
AACAAGAAGACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGC
GCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATG
ACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGAC
TTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGC
TGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTC
GTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAG
ACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTC
CTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTG
CTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTT
GGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGC
TGCCAAGCTGTTGCGCCTGTAATGCGAGTTCATGACCTTCAACTTCGCCA
TGCAGGCTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATG
TCTGGTGGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTT
CGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACG
GCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCC
AAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCT
TGAGAACGATTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCA
AGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTCTCGCC
GTCGGTGCTGCTCTTGCTGGACTGCACCCCATTATGGCTGCTCCCCGACT
TTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCC
TTCGCCCTCAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATAT
GCTACGGAATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGA
GGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAG
AGGAGGTTGCGCAGTACAACGGAGCGCTGCTGTACGGTCAGGCTTTCCCT
ATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGC
CAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCCGCT
GCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTACGGT
GTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGA
GACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCGAGT
CCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCCATG
GAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGC
CGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCCCCC
AGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAATGC
GAGTTCATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAA
CTCTGCTGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACA
TCACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCAC
TCCCAGGACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGT
CGCTCCCTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTC
GCGATCCTAACCCCGTCGTTGTTCTTGAGAACGATTACAAGGTAACGAGG
GGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACCCCCATCAC
GGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGC
ACCCCATTATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTT
TCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCC
CTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGG
TCACTGTCCGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGC
AACAAGAAGACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PDB1KJC3_009773Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009773-T1KJC3_009773-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009773-T1.cdsKJC3_009773-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009773-T1.utr3p2KJC3_009773-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_009773-T1.utr3p1KJC3_009773-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009773-T1.exon5KJC3_009773-T1.exon5Aspergillus niger KJC3exon
KJC3_009773-T1.exon4KJC3_009773-T1.exon4Aspergillus niger KJC3exon
KJC3_009773-T1.exon3KJC3_009773-T1.exon3Aspergillus niger KJC3exon
KJC3_009773-T1.exon2KJC3_009773-T1.exon2Aspergillus niger KJC3exon
KJC3_009773-T1.exon1KJC3_009773-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009773-T1.utr5p1KJC3_009773-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR033248
DBxrefInterPro:IPR009014
DBxrefInterPro:IPR005475
DBxrefPFAM:PF02779
DBxrefPFAM:PF02780
Product beta subunit
Productpyruvate dehydrogenase E1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1479908..1482955 -
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