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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1497777..1499281+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009780-T2 ID=KJC3_009780-T2|Name=KJC3_009780-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1505bp|location=Sequence derived from alignment at ch7:1497777..1499281+ (Aspergillus niger KJC3)
CGGTTCTTTAGGCATCAGCGGTGAGACTTTACTACCATTATTGTCAATTG
TCGTCGGCATGCAGGTTGGAGTGGCACCTCCGCGCGCAGCGGATACGGCA
ATCGGGATGACGTTGCCACGCAGTCCCCCGCCCTCCCATCTAGACTGTCT
GTCCGATCGGGGCTGGATGTTGCCTCCCGCTCCGTATCTTTTGACCCCAA
CCTTCCTAACTCTCTCATGCGCCCAAGCCTCACTTTCTGCTTAGATACCC
TCTCGCGCCCTCTCCAGTTTCTTTGTCACCATGGTTCGGAAGGATCCTAT
CTTTGAAGCCCGCACCAATGTCAAGGTAGGCGGTGCCCCATTATTCCCCC
TCTCTGCGGCAACGTTTCAGCGTCTGCCCGTTTACGAGCGCACCCTTGGT
TTGAATTATCATCAGTTGACTAACGTTATCATTGTCCTGCATTTAGCTAC
ACTCTAATCGACTGAAAAAGGAGGCCGCCCGTGCTGAAGCGACCTTCAAA
TCCGAGAAGGCCAAGGCTGATAAGGCCATGAAAAACCGCGAATTTCAGAT
CGCCCGCATTCATGCCGCTTCTGCCGTACGAGAGAAGCGCAGACAGGTGA
CCCTCAAGGCGGAGGCTGCCCGAGCAGATGTCATCATCAACGAGCTCAAG
GCTGCGCAGAGCACTCGGGACACATCTCGAACACTAGCGTTGGCATCACG
GGGCTTGGATGCTGCTTCCAAGAGTGTAAATCTTGAGAGCTTGGTTTCCC
ATGCGAACAATTTCCTGGCGCGCTCTGAAGATTTCAAGATTGCTAGCAGT
GCGATCGAGGATGTTGCACAAGGGGTCTCTTTGCAGGAGAATGGCGCAGA
GGGTGAAGCCGATGTGGATCGCTTGATGGAGCAACTTGCTGATGACGCTG
GGGTGGATCTCCGGATGGCTTTGGAGCAGGATGCTGCTGCTGCTCCTAAG
GAGGAGGTAAAGGCTCCTAAACAGGTCGACACTGAACTTGAGGATGGGTT
GGATGCTAGGCTACGCGCTCTCAGGGCAACCAACTGAATTTCACCTACTT
CGTTTCTATTGTCTTCTAGTGTCACGTTCACTTTGGCATTATCTGTTGAT
ATTCTTTCGGTTTCGGCGAACGATAGGAGTAACTAACAGCGCGTTGGGTA
TATGCTGGGTCGAGGTCTAGTTGCTTTACATGATTTGTTGGTCCTCGCAA
TCTCTTTCATTACATCCCTGTGAAAATCGCACTTGCTGCATACATCCATA
GCCATGCATTTGAAGGATATCCAATGGTCAATCTTACAGGAGAGACGCAC
TTTTTCTCTGCACAGACACTGTTCGCGTGGTCTATATACCGGCTTCACCT
ATATTGTCATATTGGCCTCTCTCTCGAACTGGTACGTTCTCTTAGTTACG
TGCTCTATATTCTGTCCATCAATGATTATGGGGGCATGGCTATAAAGAGA
TTACATGCCTGAGACATATGACGTTTAATTCATATTCCATACGCTCATCT
CGGGA back to topCoding sequence (CDS) from alignment at ch7:1497777..1499281+ >KJC3_009780-T2 ID=KJC3_009780-T2|Name=KJC3_009780-T2|organism=Aspergillus niger KJC3|type=CDS|length=510bp|location=Sequence derived from alignment at ch7:1497777..1499281+ (Aspergillus niger KJC3)
ATGAAAAACCGCGAATTTCAGATCGCCCGCATTCATGCCGCTTCTGCCGT
ACGAGAGAAGCGCAGACAGGTGACCCTCAAGGCGGAGGCTGCCCGAGCAG
ATGTCATCATCAACGAGCTCAAGGCTGCGCAGAGCACTCGGGACACATCT
CGAACACTAGCGTTGGCATCACGGGGCTTGGATGCTGCTTCCAAGAGTGT
AAATCTTGAGAGCTTGGTTTCCCATGCGAACAATTTCCTGGCGCGCTCTG
AAGATTTCAAGATTGCTAGCAGTGCGATCGAGGATGTTGCACAAGGGGTC
TCTTTGCAGGAGAATGGCGCAGAGGGTGAAGCCGATGTGGATCGCTTGAT
GGAGCAACTTGCTGATGACGCTGGGGTGGATCTCCGGATGGCTTTGGAGC
AGGATGCTGCTGCTGCTCCTAAGGAGGAGGTAAAGGCTCCTAAACAGGTC
GACACTGAACTTGAGGATGGGTTGGATGCTAGGCTACGCGCTCTCAGGGC
AACCAACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009780-T2.utr5p1 | KJC3_009780-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009780-T2.utr3p1 | KJC3_009780-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092656CM |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1497777..1499281 + |
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