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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1508369..1510813- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009785-T1 ID=KJC3_009785-T1|Name=KJC3_009785-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2445bp|location=Sequence derived from alignment at ch7:1508369..1510813- (Aspergillus niger KJC3)
TCTTGTCCATATTCACAATTGAGGGTTCGATTGTCGGTTCAACTCGAGCG
CATCCTTAGCATGTCGGCCCCGTCCGATGCATCTGCCTCCGCTTCTTCGC
GAGGGACGCGTGTGCATCACCGCATCCTCGCTGAACTTGGCCTGACTTCA
GTCTGGCAATCCCCTCGCGATGTCAAACTTCTCTGCGCCCAGCGCTTTGT
GCGTCTCTTCGCCTACGGTGGTTCGACTCTGATTCTGGCTGCCTATCTCT
CAGCATTGGGTATCTCCGATGAACGCATCGGTCTTTTCATGACCTTGACC
CTGGTGGGCGATGTCGCCATCAGCTTCCTCCTCACCCTGTTTGCCGACGC
CATGGGTCGCAGGGCTGTCCTGGCCCTGGGTTCAGCCTTAATGGTCGGGA
GTGGCATCCTCTTTGCTTCGGTCGGCAATTACTGGGTCCTTCTGGCGGCA
GCCGTCTTTGGCGTCATAAGTCCGAGGTAAGTTCTCCGATCTCCGAGCAA
AACATCCGACTATTTATAGTATCTCCGACATGTCTGGGCATACGCGCTTA
CAAACTCAATAAAACAGTGGAAACGAAATTGGCCCCTTCCGGGCTGTCGA
AGAATCAACTTTGGCCCATCTGGCCCCCAATGACATCTTGAGCGATATCT
TCGCATGGTACTCGCTCATTGGCAATGCGGGAACCGCTCTGGGCATGATG
ACTGGCGGATGGGCCATCAACCTGCTTCAGGTTATCTGGGGATGGCCCTA
TATTCCCGCCTGTAGAGTCATCTTCTTCGCCTATGCCGCTATTGGCGCGC
TCAAGTTTCTCCTGTCTATTGCACTGAGCTCCGCTGTGGAGGCTGAGAAG
AAGAAGCCTGCGCGACAGTCTACTAATGAGGGTGAAAGACAGCCTCTGCT
GGGCGATCAAACGGGCAACGCCACCCCCCAAGAGCAGCAGCCTCAGAAGA
AGAAATCAATTCTGTCTTTCCTCGGCGATTCCGAGGTCGTCTCCTTGTTT
CTGCGACTTGCGATTCTGTTCGGTTTGGACTCATTCGCCTCTGGACTGGC
GTCTCTGTATGTTTCCACCTAGAGGCTTGGCAACTCTTTCCAACTCGGCC
CTAGAATCCGTATAGTTCGATGAAACTGACATGTCCTTTAGATCCTGGAT
GACATACTTCTTCAAGCGCAAGTTCTCCCTCCCTGAAGGGTCACTCGGAT
CCATCTTCTTCACTACCAGCCTTATCTCTGCGGCTTCCGTGCTGGTGGCC
TCATCCATCGCCAAGCGCATTGGCAATGTTAAGGTCTGCTTTGCCCCAAG
ATATACATTCCTTCCTTACCCTTGCTGACCACTACAGACCATGGTCTTCA
CTCATCTTCCCTCCGCTATTTGCCTGGCACTCATCCCAGTTCCTTCGATT
CTCCCGCTGGCGCTAACCTTTTTGATCCTCCGCGCCTGCTCTCAAACTAT
GGATGTGGCTCCTCGCTCCGCCTTTCTGGCTGCAGCGCTGCCGCCAGACC
GTCGCACAGCTATCATGGGCTCTATCAACGTCGTCAAAACCTGCGCCCAG
AGCCTTGGACCTCTGTTGACCGGTATCTTGGCCGATCGAGGAGTCTTCGG
GGTTTCGTTCACCATCGCGGGTATCCTGAAGGCCGTCTATGACATCGGCA
TGCTGCTCAGTTTTGCCGGAAAGGAAAAGCAGCAGCGGCGACCGGCACCA
AGGAATGAAGATGAAGAGGCCGCCTAGACTCTAGACCGACTTGAACGAGC
CAGCCATGGGGATGGACGCTAAAGACGCTGGGTAGAAGTAATTACGTACG
CCCCGTTTGAATCAGCGGGGAGCGCTACGCATACAAAAGGAACAAGCAGG
TTGGAAACAAGAACATGGACAAGGAGCGGAGATGATGGTGACTCGCAGGC
AGCTGTCTAAGCAGACGGCCAGTCAGCTGCGACACTCGTTTACACTTTTA
CTCTTAACGTAACTCCCGGCCGCACCGGCCATCCCTAGCACACCGCCCTA
GAACCATCGTACTACTCATTGCTAATTCAGAGCCTTTCAACAAAAGAGTG
GTTGCATGTAGAAACGCGTTGGGCGGTGTACTGGGTGGCCGGTGCGGCCG
GGAGTTACGTTAGTACCTTGTGTATGACTACGCTTTGCTTTGCTTTTATT
GTATACCTGGTTGTGGTTGGCTACGGCGACGACTTCCTACTTCGTGGCTT
GCGTTGTTTCAAGGGGTTACGCGAGTTTGAAGGATTTGACGGCGTTTCTG
GGCCATATTCTTGCTTCAAACAGCGAAGCACCTGCAAGCATCTTACTTAG
CGGGCTGGATCAGGTATAAGGATGTGAATTGGATTGGACCGGATTGAACC
AAAAGAGTAAAACACAGAATATTAAAAATATATACAGCATCACGAATAAA
CAGATTTGATGCTTCTTTAAAGCCTTGATAGTAAATAGAATCCTG back to topCoding sequence (CDS) from alignment at ch7:1508369..1510813- >KJC3_009785-T1 ID=KJC3_009785-T1|Name=KJC3_009785-T1|organism=Aspergillus niger KJC3|type=CDS|length=5748bp|location=Sequence derived from alignment at ch7:1508369..1510813- (Aspergillus niger KJC3)
ACCATGGTCTTCACTCATCTTCCCTCCGCTATTTGCCTGGCACTCATCCC
AGTTCCTTCGATTCTCCCGCTGGCGCTAACCTTTTTGATCCTCCGCGCCT
GCTCTCAAACTATGGATGTGGCTCCTCGCTCCGCCTTTCTGGCTGCAGCG
CTGCCGCCAGACCGTCGCACAGCTATCATGGGCTCTATCAACGTCGTCAA
AACCTGCGCCCAGAGCCTTGGACCTCTGTTGACCGGTATCTTGGCCGATC
GAGGAGTCTTCGGGGTTTCGTTCACCATCGCGGGTATCCTGAAGGCCGTC
TATGACATCGGCATGCTGCTCAGTTTTGCCGGAAAGGAAAAGCAGCAGCG
GCGACCGGCACCAAGGAATGAAGATGAAGAGGCCGCCTAGATCCTGGATG
ACATACTTCTTCAAGCGCAAGTTCTCCCTCCCTGAAGGGTCACTCGGATC
CATCTTCTTCACTACCAGCCTTATCTCTGCGGCTTCCGTGCTGGTGGCCT
CATCCATCGCCAAGCGCATTGGCAATGTTAAGTGGAAACGAAATTGGCCC
CTTCCGGGCTGTCGAAGAATCAACTTTGGCCCATCTGGCCCCCAATGACA
TCTTGAGCGATATCTTCGCATGGTACTCGCTCATTGGCAATGCGGGAACC
GCTCTGGGCATGATGACTGGCGGATGGGCCATCAACCTGCTTCAGGTTAT
CTGGGGATGGCCCTATATTCCCGCCTGTAGAGTCATCTTCTTCGCCTATG
CCGCTATTGGCGCGCTCAAGTTTCTCCTGTCTATTGCACTGAGCTCCGCT
GTGGAGGCTGAGAAGAAGAAGCCTGCGCGACAGTCTACTAATGAGGGTGA
AAGACAGCCTCTGCTGGGCGATCAAACGGGCAACGCCACCCCCCAAGAGC
AGCAGCCTCAGAAGAAGAAATCAATTCTGTCTTTCCTCGGCGATTCCGAG
GTCGTCTCCTTGTTTCTGCGACTTGCGATTCTGTTCGGTTTGGACTCATT
CGCCTCTGGACTGGCGTCTCTATGTCGGCCCCGTCCGATGCATCTGCCTC
CGCTTCTTCGCGAGGGACGCGTGTGCATCACCGCATCCTCGCTGAACTTG
GCCTGACTTCAGTCTGGCAATCCCCTCGCGATGTCAAACTTCTCTGCGCC
CAGCGCTTTGTGCGTCTCTTCGCCTACGGTGGTTCGACTCTGATTCTGGC
TGCCTATCTCTCAGCATTGGGTATCTCCGATGAACGCATCGGTCTTTTCA
TGACCTTGACCCTGGTGGGCGATGTCGCCATCAGCTTCCTCCTCACCCTG
TTTGCCGACGCCATGGGTCGCAGGGCTGTCCTGGCCCTGGGTTCAGCCTT
AATGGTCGGGAGTGGCATCCTCTTTGCTTCGGTCGGCAATTACTGGGTCC
TTCTGGCGGCAGCCGTCTTTGGCGTCATAAGTCCGAGACCATGGTCTTCA
CTCATCTTCCCTCCGCTATTTGCCTGGCACTCATCCCAGTTCCTTCGATT
CTCCCGCTGGCGCTAACCTTTTTGATCCTCCGCGCCTGCTCTCAAACTAT
GGATGTGGCTCCTCGCTCCGCCTTTCTGGCTGCAGCGCTGCCGCCAGACC
GTCGCACAGCTATCATGGGCTCTATCAACGTCGTCAAAACCTGCGCCCAG
AGCCTTGGACCTCTGTTGACCGGTATCTTGGCCGATCGAGGAGTCTTCGG
GGTTTCGTTCACCATCGCGGGTATCCTGAAGGCCGTCTATGACATCGGCA
TGCTGCTCAGTTTTGCCGGAAAGGAAAAGCAGCAGCGGCGACCGGCACCA
AGGAATGAAGATGAAGAGGCCGCCTAGATCCTGGATGACATACTTCTTCA
AGCGCAAGTTCTCCCTCCCTGAAGGGTCACTCGGATCCATCTTCTTCACT
ACCAGCCTTATCTCTGCGGCTTCCGTGCTGGTGGCCTCATCCATCGCCAA
GCGCATTGGCAATGTTAAGTGGAAACGAAATTGGCCCCTTCCGGGCTGTC
GAAGAATCAACTTTGGCCCATCTGGCCCCCAATGACATCTTGAGCGATAT
CTTCGCATGGTACTCGCTCATTGGCAATGCGGGAACCGCTCTGGGCATGA
TGACTGGCGGATGGGCCATCAACCTGCTTCAGGTTATCTGGGGATGGCCC
TATATTCCCGCCTGTAGAGTCATCTTCTTCGCCTATGCCGCTATTGGCGC
GCTCAAGTTTCTCCTGTCTATTGCACTGAGCTCCGCTGTGGAGGCTGAGA
AGAAGAAGCCTGCGCGACAGTCTACTAATGAGGGTGAAAGACAGCCTCTG
CTGGGCGATCAAACGGGCAACGCCACCCCCCAAGAGCAGCAGCCTCAGAA
GAAGAAATCAATTCTGTCTTTCCTCGGCGATTCCGAGGTCGTCTCCTTGT
TTCTGCGACTTGCGATTCTGTTCGGTTTGGACTCATTCGCCTCTGGACTG
GCGTCTCTATGTCGGCCCCGTCCGATGCATCTGCCTCCGCTTCTTCGCGA
GGGACGCGTGTGCATCACCGCATCCTCGCTGAACTTGGCCTGACTTCAGT
CTGGCAATCCCCTCGCGATGTCAAACTTCTCTGCGCCCAGCGCTTTGTGC
GTCTCTTCGCCTACGGTGGTTCGACTCTGATTCTGGCTGCCTATCTCTCA
GCATTGGGTATCTCCGATGAACGCATCGGTCTTTTCATGACCTTGACCCT
GGTGGGCGATGTCGCCATCAGCTTCCTCCTCACCCTGTTTGCCGACGCCA
TGGGTCGCAGGGCTGTCCTGGCCCTGGGTTCAGCCTTAATGGTCGGGAGT
GGCATCCTCTTTGCTTCGGTCGGCAATTACTGGGTCCTTCTGGCGGCAGC
CGTCTTTGGCGTCATAAGTCCGAGACCATGGTCTTCACTCATCTTCCCTC
CGCTATTTGCCTGGCACTCATCCCAGTTCCTTCGATTCTCCCGCTGGCGC
TAACCTTTTTGATCCTCCGCGCCTGCTCTCAAACTATGGATGTGGCTCCT
CGCTCCGCCTTTCTGGCTGCAGCGCTGCCGCCAGACCGTCGCACAGCTAT
CATGGGCTCTATCAACGTCGTCAAAACCTGCGCCCAGAGCCTTGGACCTC
TGTTGACCGGTATCTTGGCCGATCGAGGAGTCTTCGGGGTTTCGTTCACC
ATCGCGGGTATCCTGAAGGCCGTCTATGACATCGGCATGCTGCTCAGTTT
TGCCGGAAAGGAAAAGCAGCAGCGGCGACCGGCACCAAGGAATGAAGATG
AAGAGGCCGCCTAGATCCTGGATGACATACTTCTTCAAGCGCAAGTTCTC
CCTCCCTGAAGGGTCACTCGGATCCATCTTCTTCACTACCAGCCTTATCT
CTGCGGCTTCCGTGCTGGTGGCCTCATCCATCGCCAAGCGCATTGGCAAT
GTTAAGTGGAAACGAAATTGGCCCCTTCCGGGCTGTCGAAGAATCAACTT
TGGCCCATCTGGCCCCCAATGACATCTTGAGCGATATCTTCGCATGGTAC
TCGCTCATTGGCAATGCGGGAACCGCTCTGGGCATGATGACTGGCGGATG
GGCCATCAACCTGCTTCAGGTTATCTGGGGATGGCCCTATATTCCCGCCT
GTAGAGTCATCTTCTTCGCCTATGCCGCTATTGGCGCGCTCAAGTTTCTC
CTGTCTATTGCACTGAGCTCCGCTGTGGAGGCTGAGAAGAAGAAGCCTGC
GCGACAGTCTACTAATGAGGGTGAAAGACAGCCTCTGCTGGGCGATCAAA
CGGGCAACGCCACCCCCCAAGAGCAGCAGCCTCAGAAGAAGAAATCAATT
CTGTCTTTCCTCGGCGATTCCGAGGTCGTCTCCTTGTTTCTGCGACTTGC
GATTCTGTTCGGTTTGGACTCATTCGCCTCTGGACTGGCGTCTCTATGTC
GGCCCCGTCCGATGCATCTGCCTCCGCTTCTTCGCGAGGGACGCGTGTGC
ATCACCGCATCCTCGCTGAACTTGGCCTGACTTCAGTCTGGCAATCCCCT
CGCGATGTCAAACTTCTCTGCGCCCAGCGCTTTGTGCGTCTCTTCGCCTA
CGGTGGTTCGACTCTGATTCTGGCTGCCTATCTCTCAGCATTGGGTATCT
CCGATGAACGCATCGGTCTTTTCATGACCTTGACCCTGGTGGGCGATGTC
GCCATCAGCTTCCTCCTCACCCTGTTTGCCGACGCCATGGGTCGCAGGGC
TGTCCTGGCCCTGGGTTCAGCCTTAATGGTCGGGAGTGGCATCCTCTTTG
CTTCGGTCGGCAATTACTGGGTCCTTCTGGCGGCAGCCGTCTTTGGCGTC
ATAAGTCCGAGACCATGGTCTTCACTCATCTTCCCTCCGCTATTTGCCTG
GCACTCATCCCAGTTCCTTCGATTCTCCCGCTGGCGCTAACCTTTTTGAT
CCTCCGCGCCTGCTCTCAAACTATGGATGTGGCTCCTCGCTCCGCCTTTC
TGGCTGCAGCGCTGCCGCCAGACCGTCGCACAGCTATCATGGGCTCTATC
AACGTCGTCAAAACCTGCGCCCAGAGCCTTGGACCTCTGTTGACCGGTAT
CTTGGCCGATCGAGGAGTCTTCGGGGTTTCGTTCACCATCGCGGGTATCC
TGAAGGCCGTCTATGACATCGGCATGCTGCTCAGTTTTGCCGGAAAGGAA
AAGCAGCAGCGGCGACCGGCACCAAGGAATGAAGATGAAGAGGCCGCCTA
GATCCTGGATGACATACTTCTTCAAGCGCAAGTTCTCCCTCCCTGAAGGG
TCACTCGGATCCATCTTCTTCACTACCAGCCTTATCTCTGCGGCTTCCGT
GCTGGTGGCCTCATCCATCGCCAAGCGCATTGGCAATGTTAAGTGGAAAC
GAAATTGGCCCCTTCCGGGCTGTCGAAGAATCAACTTTGGCCCATCTGGC
CCCCAATGACATCTTGAGCGATATCTTCGCATGGTACTCGCTCATTGGCA
ATGCGGGAACCGCTCTGGGCATGATGACTGGCGGATGGGCCATCAACCTG
CTTCAGGTTATCTGGGGATGGCCCTATATTCCCGCCTGTAGAGTCATCTT
CTTCGCCTATGCCGCTATTGGCGCGCTCAAGTTTCTCCTGTCTATTGCAC
TGAGCTCCGCTGTGGAGGCTGAGAAGAAGAAGCCTGCGCGACAGTCTACT
AATGAGGGTGAAAGACAGCCTCTGCTGGGCGATCAAACGGGCAACGCCAC
CCCCCAAGAGCAGCAGCCTCAGAAGAAGAAATCAATTCTGTCTTTCCTCG
GCGATTCCGAGGTCGTCTCCTTGTTTCTGCGACTTGCGATTCTGTTCGGT
TTGGACTCATTCGCCTCTGGACTGGCGTCTCTATGTCGGCCCCGTCCGAT
GCATCTGCCTCCGCTTCTTCGCGAGGGACGCGTGTGCATCACCGCATCCT
CGCTGAACTTGGCCTGACTTCAGTCTGGCAATCCCCTCGCGATGTCAAAC
TTCTCTGCGCCCAGCGCTTTGTGCGTCTCTTCGCCTACGGTGGTTCGACT
CTGATTCTGGCTGCCTATCTCTCAGCATTGGGTATCTCCGATGAACGCAT
CGGTCTTTTCATGACCTTGACCCTGGTGGGCGATGTCGCCATCAGCTTCC
TCCTCACCCTGTTTGCCGACGCCATGGGTCGCAGGGCTGTCCTGGCCCTG
GGTTCAGCCTTAATGGTCGGGAGTGGCATCCTCTTTGCTTCGGTCGGCAA
TTACTGGGTCCTTCTGGCGGCAGCCGTCTTTGGCGTCATAAGTCCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009785-T1.utr3p1 | KJC3_009785-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009785-T1.utr5p1 | KJC3_009785-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1508369..1510813 - |
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