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KJC3_009790-T1, KJC3_009790-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009790-T1
Unique NameKJC3_009790-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1518985..1522331+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009790-T1 ID=KJC3_009790-T1|Name=KJC3_009790-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3347bp|location=Sequence derived from alignment at ch7:1518985..1522331+ (Aspergillus niger KJC3)
CTGCAGCACCCATTTGTCCAATTTCTTCCTGCCATTGAGACGTGCGAATA
AGGATCAGATAGTCTGGAGCAGGGCGTACAGTTGCTCCTCTCTCCCTTTT
ATACGACATCTCTAGCGCTGCTTTACAGAAATCCTACGATGAGCACCATA
TCGTCAATGCCACATAGTCCGACTGATGCTTCCTCTCCACTTCAGTCTTA
CGCCCGCACTTGCTCTTCTTGTCGACAGCGAAAGGTAAAATGTGACCGCC
AACGGCCTTGTATCAACTGCAGCCGCTCGGGCGTGGAATGTATCTATCCC
CCCGGACGCGGCAGGGCTCCTAAGCGGCCCCGCAATGCCGTGAACGCGCA
GTTGTCGCACCGATTAACCAGACTCGAGTCTATCATAAGGAGCTTCGAGT
ATCATCAGAACCAGGAAAGCTCAACTCATCCACCTGCAGCGCCAGTCGCC
CTATCGTCCCGAGCAGGCAGCAGAGCGTCAGAGACTTCCCGTATCCAATC
TGTCCCCCGCACGAGCAATTCAGACTCAGAAAATTCCATTGAGCAGCATC
TAGGCCGCTTGCTGATAGATGATACACGGAGCTACTATGTCAGTAACGTC
CTCTGGGCGAATCTGGGTGATGAGGTATGTCTGGGTCCCAACCGAGACTC
TCACTGCATTCATTCGCTTTCAAACTAACGAGTAACGAAGTAGATTGCAG
AGCTGCGGGATCTACTACATGAGCCCTTGGTTGAAGAGGATTCTGCCTTT
TTGGAGGAGCCCGTTCCGGAGCGACCTTTGCCTACGGGCTCAAATGCTGC
AATATTAGGTTTTCGGGCTCTTGCTCATTCACTTCATCCCTACCATCCAC
CCTTGACTGAGTCGGTGACCCTCTTCGGGGTATTCCAAGAGAACGTCTCT
CCGATGGTACGTATCTTCCATATGCCCACGTTAGCTCGTAATTATTGGGA
TGCGGTTGCGTCTCTCGAATCGCTTGATAAGGATACCGAAGCCCTCTTAT
TCGCCATATATTACTCTGCAGTAATAAGCATGGAGCCCGAGCAATGCTTA
AGAACTATTGGCGTCTCCAAGGCACATGCTTCAGAAACCTATCTTTTCGC
CGTGGAACAGGCCTTGGCTCGTGCTGACCTGCTGAATACGCAAAGCGTCA
CGCTATTGCAAGCCGCCGTGCTTTTCCTTTTCGCGCTACGCAACGAAGAT
GACTCCCGGACCGTCTGGTCTCTCACAGCACTCATCTTTCACATCGCACA
AGCCATGGGTCTCCACCGTGATGGCGTCGTGTTTGGGCTTAAGCCTATGG
AGACAGAGCTACGCCGGCGGTTGTGGTGGCACATTTGTCTCCTAGATGCT
CGCTCATCAGAGTACCACGGCTGCGAGCCGATTGTGCGGGACTCAGCCTT
TGACACGAAGCTACCACTCAATGTTGAAGATGCTGACCTGACTGCCGACA
TGAGCGAGCTACCAACTGAGCGGACCGGTGTAACCGGCATGTATTTCTGT
CTTATTAGGTGTGAGGTCATGCGGACCATGTGGAAGCTTAGCTGTGTGGC
TCCCGGCTTGGGAGGTTCGAGACTTGGGACTGGCAGACCATCTCTGAAAG
AACGTGAAGCTTTAGTGCAGAATCTGCACGATCGCCTTGAAGAGCGATAT
TTGCAGCACTGTGATATCTCGCAGCCTTTTGGCTTGGCTTCAACATTCGT
AGCCCGTCTAATGGTTGCACGCGCGTGGCTCGTTGCACGATATCTTTTAG
ATGAGAAAGAACATGGTGACAATTTATCGGGCCCTGTGCGCGATCAACTC
TTCATGTCATCTATTGAGGTTCTGGAGTTATCCAGCTTAGTCCTCACTAA
CAAGGCCATTGCTCACTGGAGTTGGCACTCAAAGACACACATCCAATGGC
ATGCAGTTGCCTTTGTGCTCTCTGAGATCTGCACCCGGCCCCCTTCGGCA
GACTGTGACCGCGCATGGCAGTACGTCAATACCGTCTACAACAATTGGAA
GATGAAGGAAAGCGGGAGAAAGGGTACGCTATGGCGGCCTATTAGACGAC
TGATGGCCAAGGCACAGTACATACGAGAGATGCAGGAGCTAGACCCTGCC
GGTAGAGGGAGACAGAGAGCGCCGCCAAACCGAGATAGTATGCAAGGGGT
TCTAGGCCCCGAGATGTGCTGGGGTACGAACGCGGCATATGTGTCTACAC
CTGTCGACACAGCCTGTAATGTGGTAGGAGCTCTGCCCAGCGAAATCTTG
GCGGGGACTTTGGATCCCTTCGAAGAGCTTTTCCCCGGTGCTCCGCACGT
TGAGAGCTCCGCACATGAACCGTGCGACAATATAGGGCCAATGCTCCCTC
TTTATGATGACTCCCATATTCCTGAGTGGCTGGTTCCGGAGTGGATCAGG
AATCCACCGGGCAATGGGGAATGAGGTGAAGCAGGGGACATGAGTTCCCT
TTCTTCGGCATACTGCAGGTCTCACATCATAAGACCATCACGTACACGAC
TCCTAGAGGCCATCCCAGCGGAAATTGTACCACTATTTAGCCTTGATGAT
CAATTGCCATATTCGTAGGTACGAGCGTGCGAAAGGTTTGGCGGGAAGAA
GTAAGGATAAAAGCGATTCGATGTTATTCTGGATGAGGGTGCACAAGGCG
GGCTTTCAACATCTTCATTATGGCCGCCATGAGTGCGACCGACCGGAGAA
GCTCAGTTGGCCCTGGGGTCTAAGCTCGATGTCATTGGGATCACACGGAC
TATGACAGGGGTCAGCGGGGGTTCGGATAAGCCTATGCGGCCCCGAACAA
AACTGCATGAGCCTTCCGTCTCGGCCATCGGTTGCGCATAAGACCAATCT
GTTCGAGTACCCCATCTGTGTGGACGCTTGATAAATGGACGGATTCCCCA
AGTGAGACGTGGCAGTGCTGCTTGCTTGCTATCGTTTTATAAACCGGGTG
CTAACATCAATCATGTCTCTCGACCACCAAGAGCGTACCAAAAGCGAAGC
TGTTTTGGCTCATCCCCTACTCTACGAGGCAACAACCCCTGATGTTCTGG
TTGACTTCAATGGCCCAGATGATCCATACCGTTCTATCAACTGGCCTTTT
TGGAAGAAGGCCATCACGACGATCCTATACGGAATGACTACCTGCTGGAT
CACCTTTGCGTCGGCAATCTATTCCGCGGGAATGCAGCCGATCGCGCACG
AGTTCGGCGTCTCGAAGGAAGTATCCACATTGGGAATCAGCTTTTTGGTC
TTTGGTCTTGGGCTGGGACCGTTGCTGTGGGCACCTTTGAGCGAGGTTTA
TGGCCGTAAAATGGTCACCATCTTAGTACGTTCCCTGTCATGCGACC
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Coding sequence (CDS) from alignment at ch7:1518985..1522331+

>KJC3_009790-T1 ID=KJC3_009790-T1|Name=KJC3_009790-T1|organism=Aspergillus niger KJC3|type=CDS|length=4434bp|location=Sequence derived from alignment at ch7:1518985..1522331+ (Aspergillus niger KJC3)
ATGAGCACCATATCGTCAATGCCACATAGTCCGACTGATGCTTCCTCTCC
ACTTCAGTCTTACGCCCGCACTTGCTCTTCTTGTCGACAGCGAAAGGTAA
AATGTGACCGCCAACGGCCTTGTATCAACTGCAGCCGCTCGGGCGTGGAA
TGTATCTATCCCCCCGGACGCGGCAGGGCTCCTAAGCGGCCCCGCAATGC
CGTGAACGCGCAGTTGTCGCACCGATTAACCAGACTCGAGTCTATCATAA
GGAGCTTCGAGTATCATCAGAACCAGGAAAGCTCAACTCATCCACCTGCA
GCGCCAGTCGCCCTATCGTCCCGAGCAGGCAGCAGAGCGTCAGAGACTTC
CCGTATCCAATCTGTCCCCCGCACGAGCAATTCAGACTCAGAAAATTCCA
TTGAGCAGCATCTAGGCCGCTTGCTGATAGATGATACACGGAGCTACTAT
GTCAGTAACGTCCTCTGGGCGAATCTGGGTGATGAGATTGCAGAGCTGCG
GGATCTACTACATGAGCCCTTGGTTGAAGAGGATTCTGCCTTTTTGGAGG
AGCCCGTTCCGGAGCGACCTTTGCCTACGGGCTCAAATGCTGCAATATTA
GGTTTTCGGGCTCTTGCTCATTCACTTCATCCCTACCATCCACCCTTGAC
TGAGTCGGTGACCCTCTTCGGGGTATTCCAAGAGAACGTCTCTCCGATGG
TACGTATCTTCCATATGCCCACGTTAGCTCGTAATTATTGGGATGCGGTT
GCGTCTCTCGAATCGCTTGATAAGGATACCGAAGCCCTCTTATTCGCCAT
ATATTACTCTGCAGTAATAAGCATGGAGCCCGAGCAATGCTTAAGAACTA
TTGGCGTCTCCAAGGCACATGCTTCAGAAACCTATCTTTTCGCCGTGGAA
CAGGCCTTGGCTCGTGCTGACCTGCTGAATACGCAAAGCGTCACGCTATT
GCAAGCCGCCGTGCTTTTCCTTTTCGCGCTACGCAACGAAGATGACTCCC
GGACCGTCTGGTCTCTCACAGCACTCATCTTTCACATCGCACAAGCCATG
GGTCTCCACCGTGATGGCGTCGTGTTTGGGCTTAAGCCTATGGAGACAGA
GCTACGCCGGCGGTTGTGGTGGCACATTTGTCTCCTAGATGCTCGCTCAT
CAGAGTACCACGGCTGCGAGCCGATTGTGCGGGACTCAGCCTTTGACACG
AAGCTACCACTCAATGTTGAAGATGCTGACCTGACTGCCGACATGAGCGA
GCTACCAACTGAGCGGACCGGTGTAACCGGCATGTATTTCTGTCTTATTA
GGTGTGAGGTCATGCGGACCATGTGGAAGCTTAGCTGTGTGGCTCCCGGC
TTGGGAGGTTCGAGACTTGGGACTGGCAGACCATCTCTGAAAGAACGTGA
AGCTTTAGTGCAGAATCTGCACGATCGCCTTGAAGAGCGATATTTGCAGC
ACTGTGATATCTCGCAGCCTTTTGGCTTGGCTTCAACATTCGTAGCCCGT
CTAATGGTTGCACGCGCGTGGCTCGTTGCACGATATCTTTTAGATGAGAA
AGAACATGGTGACAATTTATCGGGCCCTGTGCGCGATCAACTCTTCATGT
CATCTATTGAGGTTCTGGAGTTATCCAGCTTAGTCCTCACTAACAAGGCC
ATTGCTCACTGGAGTTGGCACTCAAAGACACACATCCAATGGCATGCAGT
TGCCTTTGTGCTCTCTGAGATCTGCACCCGGCCCCCTTCGGCAGACTGTG
ACCGCGCATGGCAGTACGTCAATACCGTCTACAACAATTGGAAGATGAAG
GAAAGCGGGAGAAAGGGTACGCTATGGCGGCCTATTAGACGACTGATGGC
CAAGGCACAGTACATACGAGAGATGCAGGAGCTAGACCCTGCCGGTAGAG
GGAGACAGAGAGCGCCGCCAAACCGAGATAGTATGCAAGGGGTTCTAGGC
CCCGAGATGTGCTGGGGTACGAACGCGGCATATGTGTCTACACCTGTCGA
CACAGCCTGTAATGTGGTAGGAGCTCTGCCCAGCGAAATCTTGGCGGGGA
CTTTGGATCCCTTCGAAGAGCTTTTCCCCGGTGCTCCGCACGTTGAGAGC
TCCGCACATGAACCGTGCGACAATATAGGGCCAATGCTCCCTCTTTATGA
TGACTCCCATATTCCTGAGTGGCTGGTTCCGGAGTGGATCAGGAATCCAC
CGGGCAATGGGGAATGAATGAGCACCATATCGTCAATGCCACATAGTCCG
ACTGATGCTTCCTCTCCACTTCAGTCTTACGCCCGCACTTGCTCTTCTTG
TCGACAGCGAAAGGTAAAATGTGACCGCCAACGGCCTTGTATCAACTGCA
GCCGCTCGGGCGTGGAATGTATCTATCCCCCCGGACGCGGCAGGGCTCCT
AAGCGGCCCCGCAATGCCGTGAACGCGCAGTTGTCGCACCGATTAACCAG
ACTCGAGTCTATCATAAGGAGCTTCGAGTATCATCAGAACCAGGAAAGCT
CAACTCATCCACCTGCAGCGCCAGTCGCCCTATCGTCCCGAGCAGGCAGC
AGAGCGTCAGAGACTTCCCGTATCCAATCTGTCCCCCGCACGAGCAATTC
AGACTCAGAAAATTCCATTGAGCAGCATCTAGGCCGCTTGCTGATAGATG
ATACACGGAGCTACTATGTCAGTAACGTCCTCTGGGCGAATCTGGGTGAT
GAGATTGCAGAGCTGCGGGATCTACTACATGAGCCCTTGGTTGAAGAGGA
TTCTGCCTTTTTGGAGGAGCCCGTTCCGGAGCGACCTTTGCCTACGGGCT
CAAATGCTGCAATATTAGGTTTTCGGGCTCTTGCTCATTCACTTCATCCC
TACCATCCACCCTTGACTGAGTCGGTGACCCTCTTCGGGGTATTCCAAGA
GAACGTCTCTCCGATGGTACGTATCTTCCATATGCCCACGTTAGCTCGTA
ATTATTGGGATGCGGTTGCGTCTCTCGAATCGCTTGATAAGGATACCGAA
GCCCTCTTATTCGCCATATATTACTCTGCAGTAATAAGCATGGAGCCCGA
GCAATGCTTAAGAACTATTGGCGTCTCCAAGGCACATGCTTCAGAAACCT
ATCTTTTCGCCGTGGAACAGGCCTTGGCTCGTGCTGACCTGCTGAATACG
CAAAGCGTCACGCTATTGCAAGCCGCCGTGCTTTTCCTTTTCGCGCTACG
CAACGAAGATGACTCCCGGACCGTCTGGTCTCTCACAGCACTCATCTTTC
ACATCGCACAAGCCATGGGTCTCCACCGTGATGGCGTCGTGTTTGGGCTT
AAGCCTATGGAGACAGAGCTACGCCGGCGGTTGTGGTGGCACATTTGTCT
CCTAGATGCTCGCTCATCAGAGTACCACGGCTGCGAGCCGATTGTGCGGG
ACTCAGCCTTTGACACGAAGCTACCACTCAATGTTGAAGATGCTGACCTG
ACTGCCGACATGAGCGAGCTACCAACTGAGCGGACCGGTGTAACCGGCAT
GTATTTCTGTCTTATTAGGTGTGAGGTCATGCGGACCATGTGGAAGCTTA
GCTGTGTGGCTCCCGGCTTGGGAGGTTCGAGACTTGGGACTGGCAGACCA
TCTCTGAAAGAACGTGAAGCTTTAGTGCAGAATCTGCACGATCGCCTTGA
AGAGCGATATTTGCAGCACTGTGATATCTCGCAGCCTTTTGGCTTGGCTT
CAACATTCGTAGCCCGTCTAATGGTTGCACGCGCGTGGCTCGTTGCACGA
TATCTTTTAGATGAGAAAGAACATGGTGACAATTTATCGGGCCCTGTGCG
CGATCAACTCTTCATGTCATCTATTGAGGTTCTGGAGTTATCCAGCTTAG
TCCTCACTAACAAGGCCATTGCTCACTGGAGTTGGCACTCAAAGACACAC
ATCCAATGGCATGCAGTTGCCTTTGTGCTCTCTGAGATCTGCACCCGGCC
CCCTTCGGCAGACTGTGACCGCGCATGGCAGTACGTCAATACCGTCTACA
ACAATTGGAAGATGAAGGAAAGCGGGAGAAAGGGTACGCTATGGCGGCCT
ATTAGACGACTGATGGCCAAGGCACAGTACATACGAGAGATGCAGGAGCT
AGACCCTGCCGGTAGAGGGAGACAGAGAGCGCCGCCAAACCGAGATAGTA
TGCAAGGGGTTCTAGGCCCCGAGATGTGCTGGGGTACGAACGCGGCATAT
GTGTCTACACCTGTCGACACAGCCTGTAATGTGGTAGGAGCTCTGCCCAG
CGAAATCTTGGCGGGGACTTTGGATCCCTTCGAAGAGCTTTTCCCCGGTG
CTCCGCACGTTGAGAGCTCCGCACATGAACCGTGCGACAATATAGGGCCA
ATGCTCCCTCTTTATGATGACTCCCATATTCCTGAGTGGCTGGTTCCGGA
GTGGATCAGGAATCCACCGGGCAATGGGGAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009790KJC3_009790Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009790-T1.utr5p1KJC3_009790-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009790-T1.exon1KJC3_009790-T1.exon1Aspergillus niger KJC3exon
KJC3_009790-T1.exon2KJC3_009790-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009790-T1.cdsKJC3_009790-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009790-T1.utr3p1KJC3_009790-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009790-T1KJC3_009790-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1518985..1522331 +
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