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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1603399..1604520+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009827-T1 ID=KJC3_009827-T1|Name=KJC3_009827-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1122bp|location=Sequence derived from alignment at ch7:1603399..1604520+ (Aspergillus niger KJC3)
AAACTACAGTGATTCGCCACGCTCAGCATCACGCCGAAGAATCTGCAAGC
CATTCACACCCAAAATTGCATTAATTCAGCGAAATGCACTCGGTCAGGCG
CAGTAAAACTCACACCAGCAAAGAGCATTATCAATCAACACCCACAACAT
TGACTCACCTCACATCAGCAAGCGGCATTCGGCCTCGGCCTTCGGACATT
GCTTATCCGACAGCCAGAACCATACATACCAAACAGTCTTTAAACACATA
AATAACCACATACCTCGTAGACTGTACCACAAACGTAACACAGAGAAACA
AAAAAGTCCACTCACCTCAACCAAAGGAGAAGGAATTGGAATTGATCATC
ATGCCTCCCTCTATCGGCCTCATAATCTGCAGCCAACGCACTCCACGCGC
AGGCCCTCAAATCGCCACCTTCATTCACAATACTATTCGTCAATTCTATC
CTCCCGAAACAGCTACAATCACGACCATCGACCTAGCAGAATGGAACCTT
CCACTCTACAATGAGTCAGGAATGCCATCATTCATCAGCTCAGCGGACGA
GTACGAGCACGAGCACACAAAGGCCTGGTCACGGGAGATATCGCGCCACG
AAGCATTTATTTTCGTCACACCGCAGTATAACTGGGGGTATCCCGCGAGT
GTGAAGAATGCGATTGATTATTTGTTCCATGAGTGGAAGGGGAAGGCGGC
GTTGGTGGTGAGCTATGGGGGGCATGGGGGCGGGAAGGCGGCGGCGCAGT
TGAGGCAGGTGTTGCAGGGGGTGAGGATGAGGCCATTGGAGAGGATGGTC
GAGCTGAGGTTTCCGGAGATCGAGGAAGTTAAGAGGGCCGCTAAGGGGGA
GGATCTGGGACTGAATGGAGAGGGAGGGTATTGGGCTGGGGAGAGGGAGG
GGATTAAGGCTGCGTTTGGGGAATTGATTGCTGCGCTGGAGGGAGAGGCT
GAATAGATTGTTTGTTTGATGCATAGTTTAGACACTGGCATATGAGACGT
AATTAGTAACAGGTTACCCCGAGGTTGAGATAGAAGTCCCATGAAAGAAG
ACACTGTCACAAGTTCATGATACTGACAAGGTATTCATGTGATGCCAATC
CGGTCATATACCTGAAGTAAGA back to topCoding sequence (CDS) from alignment at ch7:1603399..1604520+ >KJC3_009827-T1 ID=KJC3_009827-T1|Name=KJC3_009827-T1|organism=Aspergillus niger KJC3|type=CDS|length=606bp|location=Sequence derived from alignment at ch7:1603399..1604520+ (Aspergillus niger KJC3)
ATGCCTCCCTCTATCGGCCTCATAATCTGCAGCCAACGCACTCCACGCGC
AGGCCCTCAAATCGCCACCTTCATTCACAATACTATTCGTCAATTCTATC
CTCCCGAAACAGCTACAATCACGACCATCGACCTAGCAGAATGGAACCTT
CCACTCTACAATGAGTCAGGAATGCCATCATTCATCAGCTCAGCGGACGA
GTACGAGCACGAGCACACAAAGGCCTGGTCACGGGAGATATCGCGCCACG
AAGCATTTATTTTCGTCACACCGCAGTATAACTGGGGGTATCCCGCGAGT
GTGAAGAATGCGATTGATTATTTGTTCCATGAGTGGAAGGGGAAGGCGGC
GTTGGTGGTGAGCTATGGGGGGCATGGGGGCGGGAAGGCGGCGGCGCAGT
TGAGGCAGGTGTTGCAGGGGGTGAGGATGAGGCCATTGGAGAGGATGGTC
GAGCTGAGGTTTCCGGAGATCGAGGAAGTTAAGAGGGCCGCTAAGGGGGA
GGATCTGGGACTGAATGGAGAGGGAGGGTATTGGGCTGGGGAGAGGGAGG
GGATTAAGGCTGCGTTTGGGGAATTGATTGCTGCGCTGGAGGGAGAGGCT
GAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009827-T1.utr5p1 | KJC3_009827-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009827-T1.utr3p1 | KJC3_009827-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029039 |
| DBxref | InterPro:IPR005025 |
| DBxref | PFAM:PF03358 |
| DBxref | PFAM:PF02525 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1603399..1604520 + |
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