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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1617363..1618792+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009834-T1 ID=KJC3_009834-T1|Name=KJC3_009834-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1430bp|location=Sequence derived from alignment at ch7:1617363..1618792+ (Aspergillus niger KJC3)
GTGACGCCTTACCATTACCGTACTAGGGGAGAAGCTGGCTATGCGATATT
GGGTTCTCAACCCTCAATCACGCGCACAGAGTCTATGGCTACCTTATCAT
CGAGTTGTGTGCTGGCATCCTTATGGCAGCGACGTTAAAGATGTCGGACC
GAAGGCAGAAATTATACTTAGATTTCCCTAGTCCAACGCTAGTCACCACG
ACATACCAGTAACCATTGCTTCTATTGCCAGGTTACGAGCTATGGATCCG
GAATGGGGCGATGAGTCTGAAGCCTCAACTGTCGGCGACGAGCAGGAGGA
TACTATCAATGAGATTGTCGCCGAAGTTATCGATCAGTTTCTCACGGAAT
TTAGCCGACAACTCGGGATTCGACAACCGGAAGACTCGTCACCGCCACGT
TCATTGGAGCCCAAGGTGCCCGAGACTGAGGAAGAGTATCGAGAATATGT
CTGGAGTTACATTGAGAATAAACTCCGGTCGTATTATCAACCGGGTGACC
AATACGTGGAAGAGATAGTGAAAAGTGCAGCTGTCCGCGCCAGGAGTCTC
ACACAGAAGTATGAGTTGAAAGCTGAAACCACGCCAAAGTTGGCCATTAT
GGCCTTATATGACTTTGTGATACTTTGCGGTATTTGATTCACTTCCCTAG
ATACTCTGATTCCGAGCTAACCTTGTGCACTAGACGATAGCAAGTCGATG
AGAAAAGACAGGGGCACTCGCATACGGGCTCTCGAAGAAACTTGTCAACG
TGTTGCTGAAATCGCTAGCGCTGTACACGAACAGGACGTGTATCTCCGGT
TTCTAAACAATGCAGAAGATCGGCATTTAAACAAGTTGTCTCCTAATGAG
ATCCAAGGTCAAATGAAGAAGATAAAGTATTCTGGGTTGACCAGACTGGG
AACTGTGCTCAGAACCAAAATCATTGAGCCTCTCATTTACGATCCTGTGA
TAAATGGCCTGTCTGCGAAGCCAGTGATTACTATTGTCGTAACCGATGGA
CGTGTGAGTAATGTCTAGCTTCATCAAATGTCAGAGGAAAGACTAATCCG
ATCGAAACATCAGCCAGAAGGTGAACACGAGAACTGTTTTGGGGAGACTA
TCTTGAGCTGCAAACAGAGGCTGAGTGAACTTTCCATGCAGCCAGCTGGT
GCGGTGTTTCTCATCTCCCGAGTTGGCAATGATGCCAATGCAGAGACATT
CCTGAGTAATCTCAAGATGAATGAGGAACTACAAGAGATGCTCTATTGTT
GCCAGGACCAGCTGGATGAGCGACGGGAAGTATTCCGTAGAGCTGGCAAA
GATGGTCGATACTCTTCGTATGTAAGTGTACCTCTTGCTTCGTGCTGAAC
ATAGTAATGTCGCGCTTTCTCACACCTCGGTACAGCTTATTGAATTATTT
GTCGCCGCACTAGATAGCCAGGCTAGATAG back to topCoding sequence (CDS) from alignment at ch7:1617363..1618792+ >KJC3_009834-T1 ID=KJC3_009834-T1|Name=KJC3_009834-T1|organism=Aspergillus niger KJC3|type=CDS|length=4044bp|location=Sequence derived from alignment at ch7:1617363..1618792+ (Aspergillus niger KJC3)
ATGGATCCGGAATGGGGCGATGAGTCTGAAGCCTCAACTGTCGGCGACGA
GCAGGAGGATACTATCAATGAGATTGTCGCCGAAGTTATCGATCAGTTTC
TCACGGAATTTAGCCGACAACTCGGGATTCGACAACCGGAAGACTCGTCA
CCGCCACGTTCATTGGAGCCCAAGGTGCCCGAGACTGAGGAAGAGTATCG
AGAATATGTCTGGAGTTACATTGAGAATAAACTCCGGTCGTATTATCAAC
CGGGTGACCAATACGTGGAAGAGATAGTGAAAAGTGCAGCTGTCCGCGCC
AGGAGTCTCACACAGAAGTATGAGTTGAAAGCTGAAACCACGCCAAAGTT
GGCCATTATGGCCTTATATGACTTTGTGATACTTTGCGACGATAGCAAGT
CGATGAGAAAAGACAGGGGCACTCGCATACGGGCTCTCGAAGAAACTTGT
CAACGTGTTGCTGAAATCGCTAGCGCTGTACACGAACAGGACGTGTATCT
CCGGTTTCTAAACAATGCAGAAGATCGGCATTTAAACAAGTTGTCTCCTA
ATGAGATCCAAGGTCAAATGAAGAAGATAAAGTATTCTGGGTTGACCAGA
CTGGGAACTGTGCTCAGAACCAAAATCATTGAGCCTCTCATTTACGATCC
TGTGATAAATGGCCTGTCTGCGAAGCCAGTGATTACTATTGTCGTAACCG
ATGGACGTCCAGAAGGTGAACACGAGAACTGTTTTGGGGAGACTATCTTG
AGCTGCAAACAGAGGCTGAGTGAACTTTCCATGCAGCCAGCTGGTGCGGT
GTTTCTCATCTCCCGAGTTGGCAATGATGCCAATGCAGAGACATTCCTGA
GTAATCTCAAGATGAATGAGGAACTACAAGAGATGCTCTATTGTTGCCAG
GACCAGCTGGATGAGCGACGGGAAGTATTCCGTAGAGCTGGCAAAGATGG
TCGATACTCTTCGTATCTTATTGAATTATTTGTCGCCGCACTAGATAGCC
AGGCTAGATAGATGGATCCGGAATGGGGCGATGAGTCTGAAGCCTCAACT
GTCGGCGACGAGCAGGAGGATACTATCAATGAGATTGTCGCCGAAGTTAT
CGATCAGTTTCTCACGGAATTTAGCCGACAACTCGGGATTCGACAACCGG
AAGACTCGTCACCGCCACGTTCATTGGAGCCCAAGGTGCCCGAGACTGAG
GAAGAGTATCGAGAATATGTCTGGAGTTACATTGAGAATAAACTCCGGTC
GTATTATCAACCGGGTGACCAATACGTGGAAGAGATAGTGAAAAGTGCAG
CTGTCCGCGCCAGGAGTCTCACACAGAAGTATGAGTTGAAAGCTGAAACC
ACGCCAAAGTTGGCCATTATGGCCTTATATGACTTTGTGATACTTTGCGA
CGATAGCAAGTCGATGAGAAAAGACAGGGGCACTCGCATACGGGCTCTCG
AAGAAACTTGTCAACGTGTTGCTGAAATCGCTAGCGCTGTACACGAACAG
GACGTGTATCTCCGGTTTCTAAACAATGCAGAAGATCGGCATTTAAACAA
GTTGTCTCCTAATGAGATCCAAGGTCAAATGAAGAAGATAAAGTATTCTG
GGTTGACCAGACTGGGAACTGTGCTCAGAACCAAAATCATTGAGCCTCTC
ATTTACGATCCTGTGATAAATGGCCTGTCTGCGAAGCCAGTGATTACTAT
TGTCGTAACCGATGGACGTCCAGAAGGTGAACACGAGAACTGTTTTGGGG
AGACTATCTTGAGCTGCAAACAGAGGCTGAGTGAACTTTCCATGCAGCCA
GCTGGTGCGGTGTTTCTCATCTCCCGAGTTGGCAATGATGCCAATGCAGA
GACATTCCTGAGTAATCTCAAGATGAATGAGGAACTACAAGAGATGCTCT
ATTGTTGCCAGGACCAGCTGGATGAGCGACGGGAAGTATTCCGTAGAGCT
GGCAAAGATGGTCGATACTCTTCGTATCTTATTGAATTATTTGTCGCCGC
ACTAGATAGCCAGGCTAGATAGATGGATCCGGAATGGGGCGATGAGTCTG
AAGCCTCAACTGTCGGCGACGAGCAGGAGGATACTATCAATGAGATTGTC
GCCGAAGTTATCGATCAGTTTCTCACGGAATTTAGCCGACAACTCGGGAT
TCGACAACCGGAAGACTCGTCACCGCCACGTTCATTGGAGCCCAAGGTGC
CCGAGACTGAGGAAGAGTATCGAGAATATGTCTGGAGTTACATTGAGAAT
AAACTCCGGTCGTATTATCAACCGGGTGACCAATACGTGGAAGAGATAGT
GAAAAGTGCAGCTGTCCGCGCCAGGAGTCTCACACAGAAGTATGAGTTGA
AAGCTGAAACCACGCCAAAGTTGGCCATTATGGCCTTATATGACTTTGTG
ATACTTTGCGACGATAGCAAGTCGATGAGAAAAGACAGGGGCACTCGCAT
ACGGGCTCTCGAAGAAACTTGTCAACGTGTTGCTGAAATCGCTAGCGCTG
TACACGAACAGGACGTGTATCTCCGGTTTCTAAACAATGCAGAAGATCGG
CATTTAAACAAGTTGTCTCCTAATGAGATCCAAGGTCAAATGAAGAAGAT
AAAGTATTCTGGGTTGACCAGACTGGGAACTGTGCTCAGAACCAAAATCA
TTGAGCCTCTCATTTACGATCCTGTGATAAATGGCCTGTCTGCGAAGCCA
GTGATTACTATTGTCGTAACCGATGGACGTCCAGAAGGTGAACACGAGAA
CTGTTTTGGGGAGACTATCTTGAGCTGCAAACAGAGGCTGAGTGAACTTT
CCATGCAGCCAGCTGGTGCGGTGTTTCTCATCTCCCGAGTTGGCAATGAT
GCCAATGCAGAGACATTCCTGAGTAATCTCAAGATGAATGAGGAACTACA
AGAGATGCTCTATTGTTGCCAGGACCAGCTGGATGAGCGACGGGAAGTAT
TCCGTAGAGCTGGCAAAGATGGTCGATACTCTTCGTATCTTATTGAATTA
TTTGTCGCCGCACTAGATAGCCAGGCTAGATAGATGGATCCGGAATGGGG
CGATGAGTCTGAAGCCTCAACTGTCGGCGACGAGCAGGAGGATACTATCA
ATGAGATTGTCGCCGAAGTTATCGATCAGTTTCTCACGGAATTTAGCCGA
CAACTCGGGATTCGACAACCGGAAGACTCGTCACCGCCACGTTCATTGGA
GCCCAAGGTGCCCGAGACTGAGGAAGAGTATCGAGAATATGTCTGGAGTT
ACATTGAGAATAAACTCCGGTCGTATTATCAACCGGGTGACCAATACGTG
GAAGAGATAGTGAAAAGTGCAGCTGTCCGCGCCAGGAGTCTCACACAGAA
GTATGAGTTGAAAGCTGAAACCACGCCAAAGTTGGCCATTATGGCCTTAT
ATGACTTTGTGATACTTTGCGACGATAGCAAGTCGATGAGAAAAGACAGG
GGCACTCGCATACGGGCTCTCGAAGAAACTTGTCAACGTGTTGCTGAAAT
CGCTAGCGCTGTACACGAACAGGACGTGTATCTCCGGTTTCTAAACAATG
CAGAAGATCGGCATTTAAACAAGTTGTCTCCTAATGAGATCCAAGGTCAA
ATGAAGAAGATAAAGTATTCTGGGTTGACCAGACTGGGAACTGTGCTCAG
AACCAAAATCATTGAGCCTCTCATTTACGATCCTGTGATAAATGGCCTGT
CTGCGAAGCCAGTGATTACTATTGTCGTAACCGATGGACGTCCAGAAGGT
GAACACGAGAACTGTTTTGGGGAGACTATCTTGAGCTGCAAACAGAGGCT
GAGTGAACTTTCCATGCAGCCAGCTGGTGCGGTGTTTCTCATCTCCCGAG
TTGGCAATGATGCCAATGCAGAGACATTCCTGAGTAATCTCAAGATGAAT
GAGGAACTACAAGAGATGCTCTATTGTTGCCAGGACCAGCTGGATGAGCG
ACGGGAAGTATTCCGTAGAGCTGGCAAAGATGGTCGATACTCTTCGTATC
TTATTGAATTATTTGTCGCCGCACTAGATAGCCAGGCTAGATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009834-T1.utr5p1 | KJC3_009834-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036465 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1617363..1618792 + |
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