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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1624697..1625824- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009837-T1 ID=KJC3_009837-T1|Name=KJC3_009837-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1128bp|location=Sequence derived from alignment at ch7:1624697..1625824- (Aspergillus niger KJC3)
ATGCCCTCTCGACGGTCTCACACTAAATCCCATCACGGCTGTGCCCAGTG
CAAACATCGTCGGATAAAATGTGACGAGTTTCGGCCTATTTGCGGCTCCT
GCCATAAGAAGCACATCAGATGTTCATTTGAGGGCCAAATCACACCCCAA
ATATCGCATCACAGCTTTGCTGCCTCCGGTACCCGCGTCGATCTCATTCC
GAGAAATGACGGCTTCCAACTCCCACTGTTGGACTTGGATCTCTTGAACC
ACTGGCACGTGGCGACCGTGCGGACACTGGTACACGACAAATCCACAGAG
AAGGTTCTGCGGGAGTTTGTCCCACAGGAGGCTCTATCGCATCCGTTTTT
AATGCACAGTCTATTGGCTTTATCCGCACTTCACCTAAGTCACCATGGCC
CCGTCGAGAGAAGACACAAGTACACCGAGGCCGCCATGACGCACAACAAC
ATTTCGCTATCTCTGTGTAAGCCTCTTCTAAATAATGTAACTTCAGGAAA
CTGCCATGCTTTGTTTGCATTCTCCTGCTTCGTCGTTATGTTCTCGTTTG
CTGCGCACGGACCAAAGGCCGACCCAGGAGCTCTGCGCCTGTCGGCTGTT
CTTGAGGTTTTCATGTTAATTCGGGGTGTAGCTTCAATAGTGGGACAGGC
TCGCCCATGGATTGAAGCGGGCGGTATGCGAGATTTACTGAAACTCGGCG
AGCAGCCACGTGAGGAATCAAAGACAACGCGTGCGCGGGAATTATATGCT
CGCATATCGGACATTTATGACAATATGAGACGGTCTTCTCGGCCGGACTG
CTATGATAGCGAGAGCTTAGTGATTGAAGAATCCGTTCAAAAGTTCCTTG
ACCTGCTGCAACAGGCAATCAGTGTGGCAAATCCAGTTCCCTCCATTATG
ATGAGGTGGCCTGCCGTGGTCAGTGTAAAGTACCTGGATTTGTTGCAGGC
AAATCATCCCACGGCACTGGTGGTACTCGCTCATTATGGTGTTGCACTGG
AACTGATGGCTGAGAATTGGTGGTTGGATGGGTGGGGTGCGTTTTTGGTG
AACATTGCTTTGTATCGTTCGGGACCGGATTATGGGCCAGAGCTTGTATG
GGCACGGAAAGCTATCACCCGGGAGTGA back to topCoding sequence (CDS) from alignment at ch7:1624697..1625824- >KJC3_009837-T1 ID=KJC3_009837-T1|Name=KJC3_009837-T1|organism=Aspergillus niger KJC3|type=CDS|length=1128bp|location=Sequence derived from alignment at ch7:1624697..1625824- (Aspergillus niger KJC3)
ATGCCCTCTCGACGGTCTCACACTAAATCCCATCACGGCTGTGCCCAGTG
CAAACATCGTCGGATAAAATGTGACGAGTTTCGGCCTATTTGCGGCTCCT
GCCATAAGAAGCACATCAGATGTTCATTTGAGGGCCAAATCACACCCCAA
ATATCGCATCACAGCTTTGCTGCCTCCGGTACCCGCGTCGATCTCATTCC
GAGAAATGACGGCTTCCAACTCCCACTGTTGGACTTGGATCTCTTGAACC
ACTGGCACGTGGCGACCGTGCGGACACTGGTACACGACAAATCCACAGAG
AAGGTTCTGCGGGAGTTTGTCCCACAGGAGGCTCTATCGCATCCGTTTTT
AATGCACAGTCTATTGGCTTTATCCGCACTTCACCTAAGTCACCATGGCC
CCGTCGAGAGAAGACACAAGTACACCGAGGCCGCCATGACGCACAACAAC
ATTTCGCTATCTCTGTGTAAGCCTCTTCTAAATAATGTAACTTCAGGAAA
CTGCCATGCTTTGTTTGCATTCTCCTGCTTCGTCGTTATGTTCTCGTTTG
CTGCGCACGGACCAAAGGCCGACCCAGGAGCTCTGCGCCTGTCGGCTGTT
CTTGAGGTTTTCATGTTAATTCGGGGTGTAGCTTCAATAGTGGGACAGGC
TCGCCCATGGATTGAAGCGGGCGGTATGCGAGATTTACTGAAACTCGGCG
AGCAGCCACGTGAGGAATCAAAGACAACGCGTGCGCGGGAATTATATGCT
CGCATATCGGACATTTATGACAATATGAGACGGTCTTCTCGGCCGGACTG
CTATGATAGCGAGAGCTTAGTGATTGAAGAATCCGTTCAAAAGTTCCTTG
ACCTGCTGCAACAGGCAATCAGTGTGGCAAATCCAGTTCCCTCCATTATG
ATGAGGTGGCCTGCCGTGGTCAGTGTAAAGTACCTGGATTTGTTGCAGGC
AAATCATCCCACGGCACTGGTGGTACTCGCTCATTATGGTGTTGCACTGG
AACTGATGGCTGAGAATTGGTGGTTGGATGGGTGGGGTGCGTTTTTGGTG
AACATTGCTTTGTATCGTTCGGGACCGGATTATGGGCCAGAGCTTGTATG
GGCACGGAAAGCTATCACCCGGGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1624697..1625824 - |
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