You are here

Home

KJC3_009849-T1, KJC3_009849-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009849-T1
Unique NameKJC3_009849-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1652276..1652787-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009849-T1 ID=KJC3_009849-T1|Name=KJC3_009849-T1|organism=Aspergillus niger KJC3|type=mRNA|length=512bp|location=Sequence derived from alignment at ch7:1652276..1652787- (Aspergillus niger KJC3)
TCAACTTCTCTATTTCCTCAGACGCGCGCTGGCTCTTACAACCTCCTTAA
TATCCGTCTTTAAAAGACTCAACATGGCCGATGATAATCCTGACGTTTCT
CAGTGGCAGTTTAGTACAACGTGGCTATATTTCCCGTGTACAGAAGAGTA
CCAGAACCGAGCCGAACAGTTTCAGAGAGCTATTGAGAATATAGATAGCT
TGACCTACGCGATCTACCACTACAATCCAGCCATTCCTCCTACTATGCGG
GGTGTTCTGCTTGCGGTCTATCACCCACTGGATTATGGTACAGCTTCTAT
CCTGGCCATTGCACGCGGCGACTTGGTCAGCTATCGAAATGCCGCTGCTG
GACAACCCGGGGGGATGGGACCCAGCCAGTCGACCATATATCTCTCGCTT
AATGAAGACGATGATATGGATACTAGGTTGGTACAGCGCTTAAATTTGGT
TCTTGAACCTGGCTGATTCTGTTTACAGCGAAGACGCAATGATGAGCACG
GATATTCAGTGA
back to top

Coding sequence (CDS) from alignment at ch7:1652276..1652787-

>KJC3_009849-T1 ID=KJC3_009849-T1|Name=KJC3_009849-T1|organism=Aspergillus niger KJC3|type=CDS|length=774bp|location=Sequence derived from alignment at ch7:1652276..1652787- (Aspergillus niger KJC3)
CGAAGACGCAATGATGAGCACGGATATTCAGTGAATGGCCGATGATAATC
CTGACGTTTCTCAGTGGCAGTTTAGTACAACGTGGCTATATTTCCCGTGT
ACAGAAGAGTACCAGAACCGAGCCGAACAGTTTCAGAGAGCTATTGAGAA
TATAGATAGCTTGACCTACGCGATCTACCACTACAATCCAGCCATTCCTC
CTACTATGCGGGGTGTTCTGCTTGCGGTCTATCACCCACTGGATTATGGT
ACAGCTTCTATCCTGGCCATTGCACGCGGCGACTTGGTCAGCTATCGAAA
TGCCGCTGCTGGACAACCCGGGGGGATGGGACCCAGCCAGTCGACCATAT
ATCTCTCGCTTAATGAAGACGATGATATGGATACTAGCGAAGACGCAATG
ATGAGCACGGATATTCAGTGAATGGCCGATGATAATCCTGACGTTTCTCA
GTGGCAGTTTAGTACAACGTGGCTATATTTCCCGTGTACAGAAGAGTACC
AGAACCGAGCCGAACAGTTTCAGAGAGCTATTGAGAATATAGATAGCTTG
ACCTACGCGATCTACCACTACAATCCAGCCATTCCTCCTACTATGCGGGG
TGTTCTGCTTGCGGTCTATCACCCACTGGATTATGGTACAGCTTCTATCC
TGGCCATTGCACGCGGCGACTTGGTCAGCTATCGAAATGCCGCTGCTGGA
CAACCCGGGGGGATGGGACCCAGCCAGTCGACCATATATCTCTCGCTTAA
TGAAGACGATGATATGGATACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009849KJC3_009849Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009849-T1KJC3_009849-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009849-T1.cdsKJC3_009849-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009849-T1.exon2KJC3_009849-T1.exon2Aspergillus niger KJC3exon
KJC3_009849-T1.exon1KJC3_009849-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009849-T1.utr5p1KJC3_009849-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1652276..1652787 -
Powered by Drupal