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KJC3_009899-T1, KJC3_009899-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009899-T1
Unique NameKJC3_009899-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1781262..1783144-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009899-T1 ID=KJC3_009899-T1|Name=KJC3_009899-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1883bp|location=Sequence derived from alignment at ch7:1781262..1783144- (Aspergillus niger KJC3)
TGTGATTAGAAATCCCGGACAATATGGATGTACGGAACTTTGCGTGTACG
GAACTTTGCGTGATCGCAATGGAAGCCGCAAAAAGGTCTGACTTTACTAT
CTTCGGAGCTACCACCCACTCCGCTTCATGATCTTGCTACGGACACTATA
GTGGGGTCTCGACTCCACACCCGACAAATATTAATAAATTACTCAAACCT
AACTTTGACCTTCTTTCCAGACCTGTGTTCAACCACGACCGTCGCACACC
ATCCGCTCCACTCGACATATCATAATGGATGGACCTGTCTTCCTCTACGA
GCTGCAACCAGCTCAGTTCAGAGACAACGTACAGGACCAGGGAGACGACG
ACCAAACCACTGCGCTGCGAGGATTCTCTCTGCCCCCAGTAGACAAGGGC
AAGGATGCATGGTTATGTCTAGTGGGGGCTTTCCTCTTGGAGATGACAGT
CTGGGGTGAGTTCTCAGAGCTCTGAATGTTGCTTAGGATATTTGAAAAAT
AGCTAACTCGCCCCACAAGGATTCCCCTTTTCATTTGGTGTGTTCCAAGA
CTATTATACCACCACTGAACCATTTGCTCAATATGCATCTCGCGTGTCCC
TGGTAGGGTCGTGCTCTATGGTAAGTAGCTCCATGGGGGCAAATGATTGT
TAGATATGCTGACTCTTGCTAGGGAATCCTATATCTTGCTTCACCTTTTA
GCCTTTTTATCCTGCAGCGCTGGCCATGTCTTTGCCGTATAAGCAGTGTG
GCCGGTCTAGTGATTGCAGTTGTTGGTATCCTATCATCCGCGTTCGCTAC
CACGGTGTGGCATCTATTGGCGACCCAGGGGATTATTTACCCGATTGGTG
CATGCACACTGTATTACCCCGTCCTGATATATATAGACGAATGGTTCGTG
CGCCGAAAAGGTCTCGCATATGGGATATGCTGGGTAAGTTTATTTCCTTC
CCCTCGAACATTCAAAGAGAAGCTCATAAAATGCAAGGCCGGAAGCGGTC
TTGCAGGGATCATATTCCCATTTATTGTCAGTGCCGCACTTTCTCAATAC
TCTTACCGGACTACTGTTTGCGCCTGGGCCGTGACCATGGTTCTTCTAGT
GTGCCCCTTCCTGCCATTTGTGAAGCCGAGAACTCCTGTTTCCGCTGCAC
AAGTTCCACGACCGCAAAAAATAAGCTTTCAATTCATGTGGTCGCGACCC
TTCCTTATCTTCCAGCTTGGGAGCATTGTACAAAGTCTGGGATATTTTGC
CCCGTCCTTTTATCTTCCAACCTATTCACGCCTCGTGGTCGGGGAATCCG
GATTCGGCATCACAGCTCCTCTAACGCTCATGAACGCGGGCATAACAATT
GGATTCATCCTAATAGGCTTCCTGATTGACCGGTGGCATGTCGCAAACGT
CATCTTCTTAGCTACCGTTTTCACAGTCCTCGCCGTCTTCGCAATCTGGG
GCATGTCAGTCTCGCTACCACCCCTATTACTGTTCGCCATTGTATACGGG
ATCTTCGCTGGCAGTGCTAGTGCAACCTGGCCTGGGATTGTACAAGCAGT
CAAGGAGACGGAACAGACTGCTCCCACGGGGATTATTTTGGGCCTCTTGA
CCGCTGGCCGCGGTGTAGGCTCGATCGCGTGTGGTCCCATTAGCGAACTT
CTGATCAACACGGAATGGCCGTTAATCACGAAGCCCGGGTCTCTGGGATA
TGGGACGAATTTTGGGAGTCTTATTGTGTTTACGGGAGTTACTGCGGTCT
TTGGAGCGTTGGGGTTTGGGGCGAGAAGACTGGGTGTTCTTCACTAAACA
TGCTGCGAGGGCAATGATACTGATGGGAATGTGAGAAAGGGGTACAAGCC
TGGTTAACGAACGGAATTTATATCGGGTGCGCC
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Coding sequence (CDS) from alignment at ch7:1781262..1783144-

>KJC3_009899-T1 ID=KJC3_009899-T1|Name=KJC3_009899-T1|organism=Aspergillus niger KJC3|type=CDS|length=5412bp|location=Sequence derived from alignment at ch7:1781262..1783144- (Aspergillus niger KJC3)
GCCGGAAGCGGTCTTGCAGGGATCATATTCCCATTTATTGTCAGTGCCGC
ACTTTCTCAATACTCTTACCGGACTACTGTTTGCGCCTGGGCCGTGACCA
TGGTTCTTCTAGTGTGCCCCTTCCTGCCATTTGTGAAGCCGAGAACTCCT
GTTTCCGCTGCACAAGTTCCACGACCGCAAAAAATAAGCTTTCAATTCAT
GTGGTCGCGACCCTTCCTTATCTTCCAGCTTGGGAGCATTGTACAAAGTC
TGGGATATTTTGCCCCGTCCTTTTATCTTCCAACCTATTCACGCCTCGTG
GTCGGGGAATCCGGATTCGGCATCACAGCTCCTCTAACGCTCATGAACGC
GGGCATAACAATTGGATTCATCCTAATAGGCTTCCTGATTGACCGGTGGC
ATGTCGCAAACGTCATCTTCTTAGCTACCGTTTTCACAGTCCTCGCCGTC
TTCGCAATCTGGGGCATGTCAGTCTCGCTACCACCCCTATTACTGTTCGC
CATTGTATACGGGATCTTCGCTGGCAGTGCTAGTGCAACCTGGCCTGGGA
TTGTACAAGCAGTCAAGGAGACGGAACAGACTGCTCCCACGGGGATTATT
TTGGGCCTCTTGACCGCTGGCCGCGGTGTAGGCTCGATCGCGTGTGGTCC
CATTAGCGAACTTCTGATCAACACGGAATGGCCGTTAATCACGAAGCCCG
GGTCTCTGGGATATGGGACGAATTTTGGGAGTCTTATTGTGTTTACGGGA
GTTACTGCGGTCTTTGGAGCGTTGGGGTTTGGGGCGAGAAGACTGGGTGT
TCTTCACTAAGGAATCCTATATCTTGCTTCACCTTTTAGCCTTTTTATCC
TGCAGCGCTGGCCATGTCTTTGCCGTATAAGCAGTGTGGCCGGTCTAGTG
ATTGCAGTTGTTGGTATCCTATCATCCGCGTTCGCTACCACGGTGTGGCA
TCTATTGGCGACCCAGGGGATTATTTACCCGATTGGTGCATGCACACTGT
ATTACCCCGTCCTGATATATATAGACGAATGGTTCGTGCGCCGAAAAGGT
CTCGCATATGGGATATGCTGGGATTCCCCTTTTCATTTGGTGTGTTCCAA
GACTATTATACCACCACTGAACCATTTGCTCAATATGCATCTCGCGTGTC
CCTGGTAGGGTCGTGCTCTATGATGGATGGACCTGTCTTCCTCTACGAGC
TGCAACCAGCTCAGTTCAGAGACAACGTACAGGACCAGGGAGACGACGAC
CAAACCACTGCGCTGCGAGGATTCTCTCTGCCCCCAGTAGACAAGGGCAA
GGATGCATGGTTATGTCTAGTGGGGGCTTTCCTCTTGGAGATGACAGTCT
GGGGCCGGAAGCGGTCTTGCAGGGATCATATTCCCATTTATTGTCAGTGC
CGCACTTTCTCAATACTCTTACCGGACTACTGTTTGCGCCTGGGCCGTGA
CCATGGTTCTTCTAGTGTGCCCCTTCCTGCCATTTGTGAAGCCGAGAACT
CCTGTTTCCGCTGCACAAGTTCCACGACCGCAAAAAATAAGCTTTCAATT
CATGTGGTCGCGACCCTTCCTTATCTTCCAGCTTGGGAGCATTGTACAAA
GTCTGGGATATTTTGCCCCGTCCTTTTATCTTCCAACCTATTCACGCCTC
GTGGTCGGGGAATCCGGATTCGGCATCACAGCTCCTCTAACGCTCATGAA
CGCGGGCATAACAATTGGATTCATCCTAATAGGCTTCCTGATTGACCGGT
GGCATGTCGCAAACGTCATCTTCTTAGCTACCGTTTTCACAGTCCTCGCC
GTCTTCGCAATCTGGGGCATGTCAGTCTCGCTACCACCCCTATTACTGTT
CGCCATTGTATACGGGATCTTCGCTGGCAGTGCTAGTGCAACCTGGCCTG
GGATTGTACAAGCAGTCAAGGAGACGGAACAGACTGCTCCCACGGGGATT
ATTTTGGGCCTCTTGACCGCTGGCCGCGGTGTAGGCTCGATCGCGTGTGG
TCCCATTAGCGAACTTCTGATCAACACGGAATGGCCGTTAATCACGAAGC
CCGGGTCTCTGGGATATGGGACGAATTTTGGGAGTCTTATTGTGTTTACG
GGAGTTACTGCGGTCTTTGGAGCGTTGGGGTTTGGGGCGAGAAGACTGGG
TGTTCTTCACTAAGGAATCCTATATCTTGCTTCACCTTTTAGCCTTTTTA
TCCTGCAGCGCTGGCCATGTCTTTGCCGTATAAGCAGTGTGGCCGGTCTA
GTGATTGCAGTTGTTGGTATCCTATCATCCGCGTTCGCTACCACGGTGTG
GCATCTATTGGCGACCCAGGGGATTATTTACCCGATTGGTGCATGCACAC
TGTATTACCCCGTCCTGATATATATAGACGAATGGTTCGTGCGCCGAAAA
GGTCTCGCATATGGGATATGCTGGGATTCCCCTTTTCATTTGGTGTGTTC
CAAGACTATTATACCACCACTGAACCATTTGCTCAATATGCATCTCGCGT
GTCCCTGGTAGGGTCGTGCTCTATGATGGATGGACCTGTCTTCCTCTACG
AGCTGCAACCAGCTCAGTTCAGAGACAACGTACAGGACCAGGGAGACGAC
GACCAAACCACTGCGCTGCGAGGATTCTCTCTGCCCCCAGTAGACAAGGG
CAAGGATGCATGGTTATGTCTAGTGGGGGCTTTCCTCTTGGAGATGACAG
TCTGGGGCCGGAAGCGGTCTTGCAGGGATCATATTCCCATTTATTGTCAG
TGCCGCACTTTCTCAATACTCTTACCGGACTACTGTTTGCGCCTGGGCCG
TGACCATGGTTCTTCTAGTGTGCCCCTTCCTGCCATTTGTGAAGCCGAGA
ACTCCTGTTTCCGCTGCACAAGTTCCACGACCGCAAAAAATAAGCTTTCA
ATTCATGTGGTCGCGACCCTTCCTTATCTTCCAGCTTGGGAGCATTGTAC
AAAGTCTGGGATATTTTGCCCCGTCCTTTTATCTTCCAACCTATTCACGC
CTCGTGGTCGGGGAATCCGGATTCGGCATCACAGCTCCTCTAACGCTCAT
GAACGCGGGCATAACAATTGGATTCATCCTAATAGGCTTCCTGATTGACC
GGTGGCATGTCGCAAACGTCATCTTCTTAGCTACCGTTTTCACAGTCCTC
GCCGTCTTCGCAATCTGGGGCATGTCAGTCTCGCTACCACCCCTATTACT
GTTCGCCATTGTATACGGGATCTTCGCTGGCAGTGCTAGTGCAACCTGGC
CTGGGATTGTACAAGCAGTCAAGGAGACGGAACAGACTGCTCCCACGGGG
ATTATTTTGGGCCTCTTGACCGCTGGCCGCGGTGTAGGCTCGATCGCGTG
TGGTCCCATTAGCGAACTTCTGATCAACACGGAATGGCCGTTAATCACGA
AGCCCGGGTCTCTGGGATATGGGACGAATTTTGGGAGTCTTATTGTGTTT
ACGGGAGTTACTGCGGTCTTTGGAGCGTTGGGGTTTGGGGCGAGAAGACT
GGGTGTTCTTCACTAAGGAATCCTATATCTTGCTTCACCTTTTAGCCTTT
TTATCCTGCAGCGCTGGCCATGTCTTTGCCGTATAAGCAGTGTGGCCGGT
CTAGTGATTGCAGTTGTTGGTATCCTATCATCCGCGTTCGCTACCACGGT
GTGGCATCTATTGGCGACCCAGGGGATTATTTACCCGATTGGTGCATGCA
CACTGTATTACCCCGTCCTGATATATATAGACGAATGGTTCGTGCGCCGA
AAAGGTCTCGCATATGGGATATGCTGGGATTCCCCTTTTCATTTGGTGTG
TTCCAAGACTATTATACCACCACTGAACCATTTGCTCAATATGCATCTCG
CGTGTCCCTGGTAGGGTCGTGCTCTATGATGGATGGACCTGTCTTCCTCT
ACGAGCTGCAACCAGCTCAGTTCAGAGACAACGTACAGGACCAGGGAGAC
GACGACCAAACCACTGCGCTGCGAGGATTCTCTCTGCCCCCAGTAGACAA
GGGCAAGGATGCATGGTTATGTCTAGTGGGGGCTTTCCTCTTGGAGATGA
CAGTCTGGGGCCGGAAGCGGTCTTGCAGGGATCATATTCCCATTTATTGT
CAGTGCCGCACTTTCTCAATACTCTTACCGGACTACTGTTTGCGCCTGGG
CCGTGACCATGGTTCTTCTAGTGTGCCCCTTCCTGCCATTTGTGAAGCCG
AGAACTCCTGTTTCCGCTGCACAAGTTCCACGACCGCAAAAAATAAGCTT
TCAATTCATGTGGTCGCGACCCTTCCTTATCTTCCAGCTTGGGAGCATTG
TACAAAGTCTGGGATATTTTGCCCCGTCCTTTTATCTTCCAACCTATTCA
CGCCTCGTGGTCGGGGAATCCGGATTCGGCATCACAGCTCCTCTAACGCT
CATGAACGCGGGCATAACAATTGGATTCATCCTAATAGGCTTCCTGATTG
ACCGGTGGCATGTCGCAAACGTCATCTTCTTAGCTACCGTTTTCACAGTC
CTCGCCGTCTTCGCAATCTGGGGCATGTCAGTCTCGCTACCACCCCTATT
ACTGTTCGCCATTGTATACGGGATCTTCGCTGGCAGTGCTAGTGCAACCT
GGCCTGGGATTGTACAAGCAGTCAAGGAGACGGAACAGACTGCTCCCACG
GGGATTATTTTGGGCCTCTTGACCGCTGGCCGCGGTGTAGGCTCGATCGC
GTGTGGTCCCATTAGCGAACTTCTGATCAACACGGAATGGCCGTTAATCA
CGAAGCCCGGGTCTCTGGGATATGGGACGAATTTTGGGAGTCTTATTGTG
TTTACGGGAGTTACTGCGGTCTTTGGAGCGTTGGGGTTTGGGGCGAGAAG
ACTGGGTGTTCTTCACTAAGGAATCCTATATCTTGCTTCACCTTTTAGCC
TTTTTATCCTGCAGCGCTGGCCATGTCTTTGCCGTATAAGCAGTGTGGCC
GGTCTAGTGATTGCAGTTGTTGGTATCCTATCATCCGCGTTCGCTACCAC
GGTGTGGCATCTATTGGCGACCCAGGGGATTATTTACCCGATTGGTGCAT
GCACACTGTATTACCCCGTCCTGATATATATAGACGAATGGTTCGTGCGC
CGAAAAGGTCTCGCATATGGGATATGCTGGGATTCCCCTTTTCATTTGGT
GTGTTCCAAGACTATTATACCACCACTGAACCATTTGCTCAATATGCATC
TCGCGTGTCCCTGGTAGGGTCGTGCTCTATGATGGATGGACCTGTCTTCC
TCTACGAGCTGCAACCAGCTCAGTTCAGAGACAACGTACAGGACCAGGGA
GACGACGACCAAACCACTGCGCTGCGAGGATTCTCTCTGCCCCCAGTAGA
CAAGGGCAAGGATGCATGGTTATGTCTAGTGGGGGCTTTCCTCTTGGAGA
TGACAGTCTGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009899KJC3_009899Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009899-T1KJC3_009899-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009899-T1.cdsKJC3_009899-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009899-T1.utr3p1KJC3_009899-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009899-T1.exon5KJC3_009899-T1.exon5Aspergillus niger KJC3exon
KJC3_009899-T1.exon4KJC3_009899-T1.exon4Aspergillus niger KJC3exon
KJC3_009899-T1.exon3KJC3_009899-T1.exon3Aspergillus niger KJC3exon
KJC3_009899-T1.exon2KJC3_009899-T1.exon2Aspergillus niger KJC3exon
KJC3_009899-T1.exon1KJC3_009899-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009899-T1.utr5p2KJC3_009899-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009899-T1.utr5p1KJC3_009899-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1781262..1783144 -
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