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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1871990..1874548+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009932-T1 ID=KJC3_009932-T1|Name=KJC3_009932-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2559bp|location=Sequence derived from alignment at ch7:1871990..1874548+ (Aspergillus niger KJC3)
AATAGGTTGCTACTGCGACAGTTCCAGCTCTTGTCACTGTCCGACTGTCC
AGGATGCCGCCCTTCAGAGATGAGCATATCTTGGTACGTGCAGATATCTC
CGATCGTCTTCACCATTCATCTAACCCCCTCCTGGCGGACCCAAACTGAC
CCCCTCCTCCCCAGATAATTGCGCCAGGCTCGCAAGTGACCCTGGCGCAA
CTGGGTCTCCCAGAGTCATTCACCCCTGCCCGCTTTCGCTTCCCTACGCG
CATGTTTCCTGCCGAAAAGAAGGGCGAATACGAACCGTACAAGATCCGCG
AACGACGACAGGAAGTCCCCGTCAGCAATGGCAATGGCACCGACGCGCCC
AAGGAGGACGTGGAGATGAAAGATGCGGAGACGGCACAGCAAGACGGAAC
CGTGAAGACCGAGAATGACCCCTCTGAACAGCCCGAAGATGCGCAGAAGA
CCGAGGGCCAGGATGCCAATGGAGAAGAGAAACAGGGAACGACAACCGAG
ATCTTCTACGAAGAGGACGTGACCTCCGATGAGGGCGCTGTCTATCCAAT
CCAGAATGGTCGCATTGTCGACTGGCCCTGTTTCTTCGCTCTTCTGACTC
ACGTTCACAACACGTTGAGTCCGCCATTCCACACCCCGATCATGCTTATT
TCCGAACCGGCATGGTCCGCCCGCGACCGGGAGACCATCACACAGTTTGT
CTTTGAGAAGTTCAAGACGCCCGCCTTCTGCCTCATGGACTCCGCTCTCG
CTGTATGCTACGGATACGGTACCTCAACGGCTACGGTGGTCGACGTCGGC
AAAGGAAAGGTTAACGTCACGGCTGTCACTGATTTCCTTGTCAACGAACA
TGGAAGAGGTATCGCGCTGGAAGGCTGCGGTGGTGACTACATGACAGATA
GAATTGTGGAGCTTTTGGGCCCGAAGGGGTTCACAAGGGAGATGTGCGAA
CAGTTGAAACGCAGCAATATCACTGAGCTTTTGCCCCCGGGCACACCCCT
TCCTGGTGCCGCTGCAACCGCGAGACAAGGGGCTAATCCAGCCGCTTCGG
CATCCACTGGGACCAAGGACGGCAATGCGCCAAATGAGAACATCCCCCGC
GGTCCGGGTGAAGGCACCCAGACCGGTGGTGAAGGCAACGGCGAAGCAGA
CGAAGATGAGGGAGTTTTGGATGTCGCAGCCATTGTCAGTGGCAACACGA
GTGAGTTCCTCGCCAATCGGGAGAAAGAGAAGGCCGAAAAGGCCTCGACC
AAGAAGGGCGCGACAGATCAATCCGGCAAGCCTCTACGTCTCCCCAACTC
CAAGAAAGAGAAGGCTTCGTTCCAATTTGAGGAGTACGTGAGGATAGAAC
CTGAGAAGGATACGCCAAATGGACCCGGGCGGTATATGCGTCAGTCTCGC
GAGATCGAGGTCGGTGTTGAACGCTTCCTCGCCGCAACTCCCAAGCAGAA
TTCTGGAGACCGTCTCACCAGCGGTCTGCTTGAGGATATTGCGACTCAGA
TTCACCACACCATCCTTGCGGTGCCTGATGCGACTAAGCGCAGTGAACTC
TGGGATTCGCTTATCGTAGTCGGCAATGGCAGCAAAGTCAAAGGTAAGTA
ACCCGGCGGATGCAACTTGAAGCCATGAGCTGATGTTTCTACAAATAGGC
TTCACACAATCCCTGCTCGGCACCATCACACAGAAGTACATTCTCTCCCC
ATCCGCCACCATGTTCACCTCCGAAATTCCCTCCAACTTCTCTACTCCCC
TTCCCACCGGAGGAACCAACACTCCGGTACCTTCCGGCCAGGCTGGTCCG
ATGAATCACCCTGCGGGTCACGGTGTGAATCCACTGCTTGTCGCAGCCAC
TCATGCCAACAACCCCATGCCCGGCACTCCCTCCATGGACCCTGCCATGT
CGCATCACCGCTCCACGGGACATTCTCAAACCCCCACATCGGTCAAGACA
CTCAGACCCCCGGAATATTTCCCCGAGTGGAAGGAGCAAAGCAACACCAA
TGCCCCTGGCGCTGCTACCACGGGTGGGCCTGGTGCCCCAAGCGGTGGCC
ACGGCATGGAGGAGGCCGTGTTCCTCGGGGCACAGGTTGCATCAAAGGTT
GTCTTCGTAATCGACCAAGGCGTCAGCAAGGGATTCATGAGCCGGGTGGA
GTACAACGAGAATGGCCCTTCTGCGATCCATGAATACACCATGTGATCAC
CTTTAATGATTGGCTTACGTGCCTGGGGATTGATGTGCGTGTTTGTTGAC
ATATGAAAGCGGAATTCTTATTTACGGACCTGGTTCTGGTTCCTTTTGAT
GCTTCCAATTTACGGTTAATTATTTTTTGTCTAACTTCTTTTCCTCGTGG
ATATTGTATTCTACGTGATGACGTCTTTCACTAGAAAAGCAAGTCTGACT
CGGATGCTAGGATAGGTGGAGTCTGGTCGGATTAGTACTTTGAATAGTAT
CTCGTTCAATGAACTGATGTAGTTGCTTTGGGTAAGCAGCCGGAGCCATG
GGCGTAGGAGCTGATAAGCCTAGGAGCTACTGATGCTAATTTATGGCAGA
CTGACTCGG back to topCoding sequence (CDS) from alignment at ch7:1871990..1874548+ >KJC3_009932-T1 ID=KJC3_009932-T1|Name=KJC3_009932-T1|organism=Aspergillus niger KJC3|type=CDS|length=6021bp|location=Sequence derived from alignment at ch7:1871990..1874548+ (Aspergillus niger KJC3)
ATGCCGCCCTTCAGAGATGAGCATATCTTGATAATTGCGCCAGGCTCGCA
AGTGACCCTGGCGCAACTGGGTCTCCCAGAGTCATTCACCCCTGCCCGCT
TTCGCTTCCCTACGCGCATGTTTCCTGCCGAAAAGAAGGGCGAATACGAA
CCGTACAAGATCCGCGAACGACGACAGGAAGTCCCCGTCAGCAATGGCAA
TGGCACCGACGCGCCCAAGGAGGACGTGGAGATGAAAGATGCGGAGACGG
CACAGCAAGACGGAACCGTGAAGACCGAGAATGACCCCTCTGAACAGCCC
GAAGATGCGCAGAAGACCGAGGGCCAGGATGCCAATGGAGAAGAGAAACA
GGGAACGACAACCGAGATCTTCTACGAAGAGGACGTGACCTCCGATGAGG
GCGCTGTCTATCCAATCCAGAATGGTCGCATTGTCGACTGGCCCTGTTTC
TTCGCTCTTCTGACTCACGTTCACAACACGTTGAGTCCGCCATTCCACAC
CCCGATCATGCTTATTTCCGAACCGGCATGGTCCGCCCGCGACCGGGAGA
CCATCACACAGTTTGTCTTTGAGAAGTTCAAGACGCCCGCCTTCTGCCTC
ATGGACTCCGCTCTCGCTGTATGCTACGGATACGGTACCTCAACGGCTAC
GGTGGTCGACGTCGGCAAAGGAAAGGTTAACGTCACGGCTGTCACTGATT
TCCTTGTCAACGAACATGGAAGAGGTATCGCGCTGGAAGGCTGCGGTGGT
GACTACATGACAGATAGAATTGTGGAGCTTTTGGGCCCGAAGGGGTTCAC
AAGGGAGATGTGCGAACAGTTGAAACGCAGCAATATCACTGAGCTTTTGC
CCCCGGGCACACCCCTTCCTGGTGCCGCTGCAACCGCGAGACAAGGGGCT
AATCCAGCCGCTTCGGCATCCACTGGGACCAAGGACGGCAATGCGCCAAA
TGAGAACATCCCCCGCGGTCCGGGTGAAGGCACCCAGACCGGTGGTGAAG
GCAACGGCGAAGCAGACGAAGATGAGGGAGTTTTGGATGTCGCAGCCATT
GTCAGTGGCAACACGAGTGAGTTCCTCGCCAATCGGGAGAAAGAGAAGGC
CGAAAAGGCCTCGACCAAGAAGGGCGCGACAGATCAATCCGGCAAGCCTC
TACGTCTCCCCAACTCCAAGAAAGAGAAGGCTTCGTTCCAATTTGAGGAG
TACGTGAGGATAGAACCTGAGAAGGATACGCCAAATGGACCCGGGCGGTA
TATGCGTCAGTCTCGCGAGATCGAGGTCGGTGTTGAACGCTTCCTCGCCG
CAACTCCCAAGCAGAATTCTGGAGACCGTCTCACCAGCGGTCTGCTTGAG
GATATTGCGACTCAGATTCACCACACCATCCTTGCGGTGCCTGATGCGAC
TAAGCGCAGTGAACTCTGGGATTCGCTTATCGTAGTCGGCAATGGCAGCA
AAGTCAAAGGCTTCACACAATCCCTGCTCGGCACCATCACACAGAAGTAC
ATTCTCTCCCCATCCGCCACCATGTTCACCTCCGAAATTCCCTCCAACTT
CTCTACTCCCCTTCCCACCGGAGGAACCAACACTCCGGTACCTTCCGGCC
AGGCTGGTCCGATGAATCACCCTGCGGGTCACGGTGTGAATCCACTGCTT
GTCGCAGCCACTCATGCCAACAACCCCATGCCCGGCACTCCCTCCATGGA
CCCTGCCATGTCGCATCACCGCTCCACGGGACATTCTCAAACCCCCACAT
CGGTCAAGACACTCAGACCCCCGGAATATTTCCCCGAGTGGAAGGAGCAA
AGCAACACCAATGCCCCTGGCGCTGCTACCACGGGTGGGCCTGGTGCCCC
AAGCGGTGGCCACGGCATGGAGGAGGCCGTGTTCCTCGGGGCACAGGTTG
CATCAAAGGTTGTCTTCGTAATCGACCAAGGCGTCAGCAAGGGATTCATG
AGCCGGGTGGAGTACAACGAGAATGGCCCTTCTGCGATCCATGAATACAC
CATGTGAATGCCGCCCTTCAGAGATGAGCATATCTTGATAATTGCGCCAG
GCTCGCAAGTGACCCTGGCGCAACTGGGTCTCCCAGAGTCATTCACCCCT
GCCCGCTTTCGCTTCCCTACGCGCATGTTTCCTGCCGAAAAGAAGGGCGA
ATACGAACCGTACAAGATCCGCGAACGACGACAGGAAGTCCCCGTCAGCA
ATGGCAATGGCACCGACGCGCCCAAGGAGGACGTGGAGATGAAAGATGCG
GAGACGGCACAGCAAGACGGAACCGTGAAGACCGAGAATGACCCCTCTGA
ACAGCCCGAAGATGCGCAGAAGACCGAGGGCCAGGATGCCAATGGAGAAG
AGAAACAGGGAACGACAACCGAGATCTTCTACGAAGAGGACGTGACCTCC
GATGAGGGCGCTGTCTATCCAATCCAGAATGGTCGCATTGTCGACTGGCC
CTGTTTCTTCGCTCTTCTGACTCACGTTCACAACACGTTGAGTCCGCCAT
TCCACACCCCGATCATGCTTATTTCCGAACCGGCATGGTCCGCCCGCGAC
CGGGAGACCATCACACAGTTTGTCTTTGAGAAGTTCAAGACGCCCGCCTT
CTGCCTCATGGACTCCGCTCTCGCTGTATGCTACGGATACGGTACCTCAA
CGGCTACGGTGGTCGACGTCGGCAAAGGAAAGGTTAACGTCACGGCTGTC
ACTGATTTCCTTGTCAACGAACATGGAAGAGGTATCGCGCTGGAAGGCTG
CGGTGGTGACTACATGACAGATAGAATTGTGGAGCTTTTGGGCCCGAAGG
GGTTCACAAGGGAGATGTGCGAACAGTTGAAACGCAGCAATATCACTGAG
CTTTTGCCCCCGGGCACACCCCTTCCTGGTGCCGCTGCAACCGCGAGACA
AGGGGCTAATCCAGCCGCTTCGGCATCCACTGGGACCAAGGACGGCAATG
CGCCAAATGAGAACATCCCCCGCGGTCCGGGTGAAGGCACCCAGACCGGT
GGTGAAGGCAACGGCGAAGCAGACGAAGATGAGGGAGTTTTGGATGTCGC
AGCCATTGTCAGTGGCAACACGAGTGAGTTCCTCGCCAATCGGGAGAAAG
AGAAGGCCGAAAAGGCCTCGACCAAGAAGGGCGCGACAGATCAATCCGGC
AAGCCTCTACGTCTCCCCAACTCCAAGAAAGAGAAGGCTTCGTTCCAATT
TGAGGAGTACGTGAGGATAGAACCTGAGAAGGATACGCCAAATGGACCCG
GGCGGTATATGCGTCAGTCTCGCGAGATCGAGGTCGGTGTTGAACGCTTC
CTCGCCGCAACTCCCAAGCAGAATTCTGGAGACCGTCTCACCAGCGGTCT
GCTTGAGGATATTGCGACTCAGATTCACCACACCATCCTTGCGGTGCCTG
ATGCGACTAAGCGCAGTGAACTCTGGGATTCGCTTATCGTAGTCGGCAAT
GGCAGCAAAGTCAAAGGCTTCACACAATCCCTGCTCGGCACCATCACACA
GAAGTACATTCTCTCCCCATCCGCCACCATGTTCACCTCCGAAATTCCCT
CCAACTTCTCTACTCCCCTTCCCACCGGAGGAACCAACACTCCGGTACCT
TCCGGCCAGGCTGGTCCGATGAATCACCCTGCGGGTCACGGTGTGAATCC
ACTGCTTGTCGCAGCCACTCATGCCAACAACCCCATGCCCGGCACTCCCT
CCATGGACCCTGCCATGTCGCATCACCGCTCCACGGGACATTCTCAAACC
CCCACATCGGTCAAGACACTCAGACCCCCGGAATATTTCCCCGAGTGGAA
GGAGCAAAGCAACACCAATGCCCCTGGCGCTGCTACCACGGGTGGGCCTG
GTGCCCCAAGCGGTGGCCACGGCATGGAGGAGGCCGTGTTCCTCGGGGCA
CAGGTTGCATCAAAGGTTGTCTTCGTAATCGACCAAGGCGTCAGCAAGGG
ATTCATGAGCCGGGTGGAGTACAACGAGAATGGCCCTTCTGCGATCCATG
AATACACCATGTGAATGCCGCCCTTCAGAGATGAGCATATCTTGATAATT
GCGCCAGGCTCGCAAGTGACCCTGGCGCAACTGGGTCTCCCAGAGTCATT
CACCCCTGCCCGCTTTCGCTTCCCTACGCGCATGTTTCCTGCCGAAAAGA
AGGGCGAATACGAACCGTACAAGATCCGCGAACGACGACAGGAAGTCCCC
GTCAGCAATGGCAATGGCACCGACGCGCCCAAGGAGGACGTGGAGATGAA
AGATGCGGAGACGGCACAGCAAGACGGAACCGTGAAGACCGAGAATGACC
CCTCTGAACAGCCCGAAGATGCGCAGAAGACCGAGGGCCAGGATGCCAAT
GGAGAAGAGAAACAGGGAACGACAACCGAGATCTTCTACGAAGAGGACGT
GACCTCCGATGAGGGCGCTGTCTATCCAATCCAGAATGGTCGCATTGTCG
ACTGGCCCTGTTTCTTCGCTCTTCTGACTCACGTTCACAACACGTTGAGT
CCGCCATTCCACACCCCGATCATGCTTATTTCCGAACCGGCATGGTCCGC
CCGCGACCGGGAGACCATCACACAGTTTGTCTTTGAGAAGTTCAAGACGC
CCGCCTTCTGCCTCATGGACTCCGCTCTCGCTGTATGCTACGGATACGGT
ACCTCAACGGCTACGGTGGTCGACGTCGGCAAAGGAAAGGTTAACGTCAC
GGCTGTCACTGATTTCCTTGTCAACGAACATGGAAGAGGTATCGCGCTGG
AAGGCTGCGGTGGTGACTACATGACAGATAGAATTGTGGAGCTTTTGGGC
CCGAAGGGGTTCACAAGGGAGATGTGCGAACAGTTGAAACGCAGCAATAT
CACTGAGCTTTTGCCCCCGGGCACACCCCTTCCTGGTGCCGCTGCAACCG
CGAGACAAGGGGCTAATCCAGCCGCTTCGGCATCCACTGGGACCAAGGAC
GGCAATGCGCCAAATGAGAACATCCCCCGCGGTCCGGGTGAAGGCACCCA
GACCGGTGGTGAAGGCAACGGCGAAGCAGACGAAGATGAGGGAGTTTTGG
ATGTCGCAGCCATTGTCAGTGGCAACACGAGTGAGTTCCTCGCCAATCGG
GAGAAAGAGAAGGCCGAAAAGGCCTCGACCAAGAAGGGCGCGACAGATCA
ATCCGGCAAGCCTCTACGTCTCCCCAACTCCAAGAAAGAGAAGGCTTCGT
TCCAATTTGAGGAGTACGTGAGGATAGAACCTGAGAAGGATACGCCAAAT
GGACCCGGGCGGTATATGCGTCAGTCTCGCGAGATCGAGGTCGGTGTTGA
ACGCTTCCTCGCCGCAACTCCCAAGCAGAATTCTGGAGACCGTCTCACCA
GCGGTCTGCTTGAGGATATTGCGACTCAGATTCACCACACCATCCTTGCG
GTGCCTGATGCGACTAAGCGCAGTGAACTCTGGGATTCGCTTATCGTAGT
CGGCAATGGCAGCAAAGTCAAAGGCTTCACACAATCCCTGCTCGGCACCA
TCACACAGAAGTACATTCTCTCCCCATCCGCCACCATGTTCACCTCCGAA
ATTCCCTCCAACTTCTCTACTCCCCTTCCCACCGGAGGAACCAACACTCC
GGTACCTTCCGGCCAGGCTGGTCCGATGAATCACCCTGCGGGTCACGGTG
TGAATCCACTGCTTGTCGCAGCCACTCATGCCAACAACCCCATGCCCGGC
ACTCCCTCCATGGACCCTGCCATGTCGCATCACCGCTCCACGGGACATTC
TCAAACCCCCACATCGGTCAAGACACTCAGACCCCCGGAATATTTCCCCG
AGTGGAAGGAGCAAAGCAACACCAATGCCCCTGGCGCTGCTACCACGGGT
GGGCCTGGTGCCCCAAGCGGTGGCCACGGCATGGAGGAGGCCGTGTTCCT
CGGGGCACAGGTTGCATCAAAGGTTGTCTTCGTAATCGACCAAGGCGTCA
GCAAGGGATTCATGAGCCGGGTGGAGTACAACGAGAATGGCCCTTCTGCG
ATCCATGAATACACCATGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009932-T1.utr5p1 | KJC3_009932-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR043129 |
| DBxref | InterPro:IPR004000 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1871990..1874548 + |
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