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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1887535..1888336- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009939-T1 ID=KJC3_009939-T1|Name=KJC3_009939-T1|organism=Aspergillus niger KJC3|type=mRNA|length=802bp|location=Sequence derived from alignment at ch7:1887535..1888336- (Aspergillus niger KJC3)
ATGCACTTGTTTGTACTGTTGAAGAATATGGCCACCAATCTCAGCACCCT
TCTTGCCATCCTATCGAAGTGACATCTTATTCCAGAGCCTTATTCTTCTA
GATACCAGCTAACGCAACAAAAATCTAGCATCCGGAATGGAATATATTCC
GACGTCGAAATAAAATGCCATTCATCGACTTTCAAAGTCCATCGCTGTAT
AATCTGTCCGCAATCGGAGTTTTTCGAGAAGGCCCTGTGTGGGGGGTTCC
AGGTGAGCACATGGCATATCTCAGTATGACTCTAACGAGTTACAGGAGGC
CAAAACAAATGTCGTTACTATCCACGACGATCCCACGATCGTCAAGAAAA
TGATCGATTATTTCTATCGTGGAGACTACGACGATTCTCCGGACAAGAGT
CACCTTGCCACGAATCCCGACTATGAATCTCCTACCACCAAGGCGCCTGT
TAATATAGAAATGTACAACGTGGCTGATAAATACGCCATTGGACCACTTA
TGGCCCTAGCAAAGAAAAAGCTCGAGTACAGACTTACCTTAGCCTGGGAC
AACAAGGAATTCATCCACATTATCGAGAAAGTCTACGGAGAGGATAGCCC
ACAAAACTCGAAGCTGCGAGGGACAATAGCCAAGTTCGCCGTTGAACATC
TTGCAACTCTTATAGAGTTGCCTCGATTTGACGAGGTGCGCAGTGAATAC
CCATTATTTTCATATGACTTCTCCACATCAATGATACAACGGATGGCTCG
TGTGGAAACAAAGTTACGGTACGTAATTAGAAAATTAGCTCAAAGAAAAT
AG back to topCoding sequence (CDS) from alignment at ch7:1887535..1888336- >KJC3_009939-T1 ID=KJC3_009939-T1|Name=KJC3_009939-T1|organism=Aspergillus niger KJC3|type=CDS|length=2097bp|location=Sequence derived from alignment at ch7:1887535..1888336- (Aspergillus niger KJC3)
GAGGCCAAAACAAATGTCGTTACTATCCACGACGATCCCACGATCGTCAA
GAAAATGATCGATTATTTCTATCGTGGAGACTACGACGATTCTCCGGACA
AGAGTCACCTTGCCACGAATCCCGACTATGAATCTCCTACCACCAAGGCG
CCTGTTAATATAGAAATGTACAACGTGGCTGATAAATACGCCATTGGACC
ACTTATGGCCCTAGCAAAGAAAAAGCTCGAGTACAGACTTACCTTAGCCT
GGGACAACAAGGAATTCATCCACATTATCGAGAAAGTCTACGGAGAGGAT
AGCCCACAAAACTCGAAGCTGCGAGGGACAATAGCCAAGTTCGCCGTTGA
ACATCTTGCAACTCTTATAGAGTTGCCTCGATTTGACGAGGTGCGCAGTG
AATACCCATTATTTTCATATGACTTCTCCACATCAATGATACAACGGATG
GCTCGTGTGGAAACAAAGTTACGGTACGTAATTAGAAAATTAGCTCAAAG
AAAATAGCATCCGGAATGGAATATATTCCGACGTCGAAATAAAATGCCAT
TCATCGACTTTCAAAGTCCATCGCTGTATAATCTGTCCGCAATCGGAGTT
TTTCGAGAAGGCCCTGTGTGGGGGGTTCCAGATGCACTTGTTTGTACTGT
TGAAGAATATGGCCACCAATCTCAGCACCCTTCTTGCCATCCTATCGAAG
AGGCCAAAACAAATGTCGTTACTATCCACGACGATCCCACGATCGTCAAG
AAAATGATCGATTATTTCTATCGTGGAGACTACGACGATTCTCCGGACAA
GAGTCACCTTGCCACGAATCCCGACTATGAATCTCCTACCACCAAGGCGC
CTGTTAATATAGAAATGTACAACGTGGCTGATAAATACGCCATTGGACCA
CTTATGGCCCTAGCAAAGAAAAAGCTCGAGTACAGACTTACCTTAGCCTG
GGACAACAAGGAATTCATCCACATTATCGAGAAAGTCTACGGAGAGGATA
GCCCACAAAACTCGAAGCTGCGAGGGACAATAGCCAAGTTCGCCGTTGAA
CATCTTGCAACTCTTATAGAGTTGCCTCGATTTGACGAGGTGCGCAGTGA
ATACCCATTATTTTCATATGACTTCTCCACATCAATGATACAACGGATGG
CTCGTGTGGAAACAAAGTTACGGTACGTAATTAGAAAATTAGCTCAAAGA
AAATAGCATCCGGAATGGAATATATTCCGACGTCGAAATAAAATGCCATT
CATCGACTTTCAAAGTCCATCGCTGTATAATCTGTCCGCAATCGGAGTTT
TTCGAGAAGGCCCTGTGTGGGGGGTTCCAGATGCACTTGTTTGTACTGTT
GAAGAATATGGCCACCAATCTCAGCACCCTTCTTGCCATCCTATCGAAGA
GGCCAAAACAAATGTCGTTACTATCCACGACGATCCCACGATCGTCAAGA
AAATGATCGATTATTTCTATCGTGGAGACTACGACGATTCTCCGGACAAG
AGTCACCTTGCCACGAATCCCGACTATGAATCTCCTACCACCAAGGCGCC
TGTTAATATAGAAATGTACAACGTGGCTGATAAATACGCCATTGGACCAC
TTATGGCCCTAGCAAAGAAAAAGCTCGAGTACAGACTTACCTTAGCCTGG
GACAACAAGGAATTCATCCACATTATCGAGAAAGTCTACGGAGAGGATAG
CCCACAAAACTCGAAGCTGCGAGGGACAATAGCCAAGTTCGCCGTTGAAC
ATCTTGCAACTCTTATAGAGTTGCCTCGATTTGACGAGGTGCGCAGTGAA
TACCCATTATTTTCATATGACTTCTCCACATCAATGATACAACGGATGGC
TCGTGTGGAAACAAAGTTACGGTACGTAATTAGAAAATTAGCTCAAAGAA
AATAGCATCCGGAATGGAATATATTCCGACGTCGAAATAAAATGCCATTC
ATCGACTTTCAAAGTCCATCGCTGTATAATCTGTCCGCAATCGGAGTTTT
TCGAGAAGGCCCTGTGTGGGGGGTTCCAGATGCACTTGTTTGTACTGTTG
AAGAATATGGCCACCAATCTCAGCACCCTTCTTGCCATCCTATCGAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011333 |
| DBxref | InterPro:IPR000210 |
| DBxref | PFAM:PF00651 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1887535..1888336 - |
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