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KJC3_009954-T1, KJC3_009954-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009954-T1
Unique NameKJC3_009954-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1924993..1926895+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009954-T1 ID=KJC3_009954-T1|Name=KJC3_009954-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1903bp|location=Sequence derived from alignment at ch7:1924993..1926895+ (Aspergillus niger KJC3)
CATCACCATCACCCTCATCATCATTACCAACGTTCTTTATCCGCTGACTT
TCCACCAAGGTCCTACCTGCTCCAATTCCCTCTCCTGATCATTGTTCACA
GCGTGGAATCAAATGGTGGTGTGATGGTGGTAAGCTGGTGATGGTCAATA
CTCGATTTTCTCCCGAAGAAGATACCTGCTCTAGGAGCGACTTTCTTGCA
TGAGGATGCTGCAGAAGGTGGGATGTTACAAATGAAATTGACTCAGTCAT
TGGCTGACACTTGCAAAAGCAATGACCAGATAAGTTAAATGAGGAATCGA
GTCAGAGGCAGGCTACCTTGTTAGTGTCGGAGACCGGGCCTGTCCACGCT
CTCAAGGTCCTCACAAGGTCCTCACCTGGAAAATCTCTGCCACGCACTCC
CGTCATATAAGACCGTGACGCAAGGATGTGCCAAACAGAGGAAATGATCA
GAGCCATCCAATTCTGCTTTTCCTTATCCTCTTTGATCTGAGTGACATTC
ATCCTCAATCACTCAAAAATGTCGTTCAATCCTAATGATGTCGACCTCGA
CACGGCCGACCCAACCGAGATTATTTGCTATCTCAACAAGTCAGAAAATG
ACTACAACGGCCAGTTGGGTGCCCGCATCTCGGCTATTTTCGTGATCTTT
GCCGTCTCAACTGCAGTGACCTTTTTCCCCGTCGTCGCCAAGCGCGTCCC
CAGGCTGCATATTCCACTCTACGTCTATCTCTTCGCTCGTTACTTCGGTG
CAGGTGTCATCATTGCAACGGCTTTCATCCATCTTCTGGACCCCGCATAC
TCCGAAATCGGCCCGCAGTCATGCGTCGGAATGACTGGTAACTGGGCCGA
TTACTCCTGGTGCCCTGCGATCGTCCTGACCTCGCTCATGTGCATCTTCC
TCCTTGACTTCGGTGCCGAGCGTTATGTCGAAGTCAAGTATGGCGTCTGC
AGAGAGGACCCCGAGCCCATCATGACTAGCGCAGTGGATAACTCGACTGT
AGACAAGGAGTCGCCTGGAAACACTAGAAAGGGCGAGGCTGATGTGGAGG
AGTTGTCCACCAGTGACACATTGATCGAGAAATCCTTCAAGCAACAGATT
GCCGCGTTCCTCATTCTCGAGTTCGGTGTCATCTTCCACTCCGTCATTAT
TGGTCTGAACCTGGGAGTTACTGGCGACGAATTCGCGACGCTTTACCCGG
TCCTTGTCTTCCACCAGTCCTTCGAAGGTCTGGGTATTGGAGCTCGTATG
TCCGCCATCCCCTTCCGTAAGGGCAGCTGGCTGCCGTGGATCCTTTGCAG
CTTGTACGGATTGACTACACCCATCTCGATCGCTATTGGTCTCGGTGTCA
GAACTACATACAACTCTGGCTCGTACACCGCCAACGTGGTCTCCGGTGTT
CTGGATGCCATTTCTGCGGGTATCCTGATTTACACTGGTCTGGTTGAGCT
TTTGGCTAGAGACTTCCTCTTCGATCCTCACCGCTCTCAAGACAACAAGC
GATTGGCATTCATGGTTATCACCATGCTCTGGGGTGCTGGTATTATGGCT
CTTCTCGGAAAGTGGGCTTAAGCTCCATTGAAGAAGTCGTTGTGAAAACG
TGCTGTGTCGCTTCTGTTAAGATTATCCCGCTGGCTCTGATATCCGTTGC
TCATGCAACCTCTCTTCTTGCTCATATTCACTCCCATTGCTGTTTGAAAT
ACCCTTTGCCATTCCATTCTCAAAATTTATTTGTCATGTGCATATATGTA
TGGACGATAATAATTAGCTAGGACAAAATTCTTCAGATTGATATATGATT
TATCTTCTCACTGTCATCCATGGTGTTCTATTCTGCACAAACTGAACTGA
GATCTTTTTTCTTCTATCCAGTTGCTCGTTATATTCATCTGAACGGTACT
CGC
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Coding sequence (CDS) from alignment at ch7:1924993..1926895+

>KJC3_009954-T1 ID=KJC3_009954-T1|Name=KJC3_009954-T1|organism=Aspergillus niger KJC3|type=CDS|length=1053bp|location=Sequence derived from alignment at ch7:1924993..1926895+ (Aspergillus niger KJC3)
ATGTCGTTCAATCCTAATGATGTCGACCTCGACACGGCCGACCCAACCGA
GATTATTTGCTATCTCAACAAGTCAGAAAATGACTACAACGGCCAGTTGG
GTGCCCGCATCTCGGCTATTTTCGTGATCTTTGCCGTCTCAACTGCAGTG
ACCTTTTTCCCCGTCGTCGCCAAGCGCGTCCCCAGGCTGCATATTCCACT
CTACGTCTATCTCTTCGCTCGTTACTTCGGTGCAGGTGTCATCATTGCAA
CGGCTTTCATCCATCTTCTGGACCCCGCATACTCCGAAATCGGCCCGCAG
TCATGCGTCGGAATGACTGGTAACTGGGCCGATTACTCCTGGTGCCCTGC
GATCGTCCTGACCTCGCTCATGTGCATCTTCCTCCTTGACTTCGGTGCCG
AGCGTTATGTCGAAGTCAAGTATGGCGTCTGCAGAGAGGACCCCGAGCCC
ATCATGACTAGCGCAGTGGATAACTCGACTGTAGACAAGGAGTCGCCTGG
AAACACTAGAAAGGGCGAGGCTGATGTGGAGGAGTTGTCCACCAGTGACA
CATTGATCGAGAAATCCTTCAAGCAACAGATTGCCGCGTTCCTCATTCTC
GAGTTCGGTGTCATCTTCCACTCCGTCATTATTGGTCTGAACCTGGGAGT
TACTGGCGACGAATTCGCGACGCTTTACCCGGTCCTTGTCTTCCACCAGT
CCTTCGAAGGTCTGGGTATTGGAGCTCGTATGTCCGCCATCCCCTTCCGT
AAGGGCAGCTGGCTGCCGTGGATCCTTTGCAGCTTGTACGGATTGACTAC
ACCCATCTCGATCGCTATTGGTCTCGGTGTCAGAACTACATACAACTCTG
GCTCGTACACCGCCAACGTGGTCTCCGGTGTTCTGGATGCCATTTCTGCG
GGTATCCTGATTTACACTGGTCTGGTTGAGCTTTTGGCTAGAGACTTCCT
CTTCGATCCTCACCGCTCTCAAGACAACAAGCGATTGGCATTCATGGTTA
TCACCATGCTCTGGGGTGCTGGTATTATGGCTCTTCTCGGAAAGTGGGCT
TAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0071577zinc ion transmembrane transport
GO:0030001metal ion transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005385zinc ion transmembrane transporter activity
GO:0046873metal ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009954KJC3_009954Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009954-T1KJC3_009954-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009954-T1.utr5p1KJC3_009954-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_009954-T1.utr5p2KJC3_009954-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009954-T1.exon1KJC3_009954-T1.exon1Aspergillus niger KJC3exon
KJC3_009954-T1.exon2KJC3_009954-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009954-T1.cdsKJC3_009954-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009954-T1.utr3p1KJC3_009954-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004698
DBxrefInterPro:IPR003689
DBxrefPFAM:PF02535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1924993..1926895 +
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