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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2024336..2025089+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009991-T1 ID=KJC3_009991-T1|Name=KJC3_009991-T1|organism=Aspergillus niger KJC3|type=mRNA|length=754bp|location=Sequence derived from alignment at ch7:2024336..2025089+ (Aspergillus niger KJC3)
ACATACCAGCACTAGTGTAACTAACTCATCTGCACCTCCTCCGTAGCCAT
GCCCCTCGCCAGGGCAACCTTCGAAGACATCATCCTCGCTGAATCCCCAA
CCTGGGAGACCGTCGAAGGAAACATCTACGTAAGCCCCATCATATGTCAA
AACAACCCTATCACTGACCACAACCTCCCAGTTTCCTCCCACAGCAATCA
AAGACAAATCGCTCTTCGTTCCCATTGACAAGGTAACATTTTGTCCTTGG
AAGGGAGACGCGTCATATTACTCTATTGTGGTTGGACGTGAGTATCTCCC
TCGACCTCCTGTTTCGTTCAGACTGCTCCCTACGGGAGACAAAATCATCG
TAATCATTGCTAACAATATGATATCTAGCAACAACAATCCCCGGTGGAGC
GTGGTATTATCCCAACCCATATGATGCTGCCAGCAATATCAAGGATCACG
TTGCATTTTGTATGTGTTTCCTTTTGTTTGCTTCTAAGCTGGGTGAGCTA
ACGGTGCATGGATTCAGACACAACAGGCAGCATCAAAGTGAGCGTGGAAT
GAATGGATAGTCGAGATTGGTGTTCTGAGTGGCATGTCTGTAATGAAGGT
TGATGATTGATCCAGAAGTACTAATTTGAATAACTCTACCTCTTGACATT
CCAATACACTGCAGGCGCGGGTTATGCTGGTTTCCTTAGCTACATTAGTG
CCGTATTGTTATATATACTAGCACTGTGCAATCTGATTCTCTCTGCAACT
AGTG back to topCoding sequence (CDS) from alignment at ch7:2024336..2025089+ >KJC3_009991-T1 ID=KJC3_009991-T1|Name=KJC3_009991-T1|organism=Aspergillus niger KJC3|type=CDS|length=1212bp|location=Sequence derived from alignment at ch7:2024336..2025089+ (Aspergillus niger KJC3)
ATGCCCCTCGCCAGGGCAACCTTCGAAGACATCATCCTCGCTGAATCCCC
AACCTGGGAGACCGTCGAAGGAAACATCTACTTTCCTCCCACAGCAATCA
AAGACAAATCGCTCTTCGTTCCCATTGACAAGGTAACATTTTGTCCTTGG
AAGGGAGACGCGTCATATTACTCTATTGTGGTTGGACCAACAACAATCCC
CGGTGGAGCGTGGTATTATCCCAACCCATATGATGCTGCCAGCAATATCA
AGGATCACGTTGCATTTTACACAACAGGCAGCATCAAAGTGAGCGTGGAA
TGAATGCCCCTCGCCAGGGCAACCTTCGAAGACATCATCCTCGCTGAATC
CCCAACCTGGGAGACCGTCGAAGGAAACATCTACTTTCCTCCCACAGCAA
TCAAAGACAAATCGCTCTTCGTTCCCATTGACAAGGTAACATTTTGTCCT
TGGAAGGGAGACGCGTCATATTACTCTATTGTGGTTGGACCAACAACAAT
CCCCGGTGGAGCGTGGTATTATCCCAACCCATATGATGCTGCCAGCAATA
TCAAGGATCACGTTGCATTTTACACAACAGGCAGCATCAAAGTGAGCGTG
GAATGAATGCCCCTCGCCAGGGCAACCTTCGAAGACATCATCCTCGCTGA
ATCCCCAACCTGGGAGACCGTCGAAGGAAACATCTACTTTCCTCCCACAG
CAATCAAAGACAAATCGCTCTTCGTTCCCATTGACAAGGTAACATTTTGT
CCTTGGAAGGGAGACGCGTCATATTACTCTATTGTGGTTGGACCAACAAC
AATCCCCGGTGGAGCGTGGTATTATCCCAACCCATATGATGCTGCCAGCA
ATATCAAGGATCACGTTGCATTTTACACAACAGGCAGCATCAAAGTGAGC
GTGGAATGAATGCCCCTCGCCAGGGCAACCTTCGAAGACATCATCCTCGC
TGAATCCCCAACCTGGGAGACCGTCGAAGGAAACATCTACTTTCCTCCCA
CAGCAATCAAAGACAAATCGCTCTTCGTTCCCATTGACAAGGTAACATTT
TGTCCTTGGAAGGGAGACGCGTCATATTACTCTATTGTGGTTGGACCAAC
AACAATCCCCGGTGGAGCGTGGTATTATCCCAACCCATATGATGCTGCCA
GCAATATCAAGGATCACGTTGCATTTTACACAACAGGCAGCATCAAAGTG
AGCGTGGAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009991-T1.utr5p1 | KJC3_009991-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009991-T1.utr3p1 | KJC3_009991-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR038694 |
| DBxref | InterPro:IPR007361 |
| DBxref | PFAM:PF04248 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2024336..2025089 + |
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