KJC3_009996-T1, KJC3_009996-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_009996-T1
Unique Name	KJC3_009996-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch7:2032006..2034548-
coding sequence from alignment at ch7:2032006..2034548-

mRNA from alignment at ch7:2032006..2034548-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_009996-T1 ID=KJC3_009996-T1|Name=KJC3_009996-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2543bp|location=Sequence derived from alignment at ch7:2032006..2034548- (Aspergillus niger KJC3)
ACGGAGAAATTTGCTCTCTACATCTTGGTAACACAGAAGTGAAGTGACTG
CATGCTGAAATAGAGGCCGATACTCACGTGACCCGTACAAACAATCATCT
GCGGTGTTAACCTACTACCAAGACGACAGACATCTCATCATGAAGCGCAA
AGCTGCATTCCAGCTGCCTCATACCCCCCGACGCGCTCCGCGGCAGGACC
CCGTGTCTTGCGACTCTTGTCGGCTCAAGAAGATTAAATGCGATCGCCAG
CAGCCATGCAGCAGTTGCTCTGCGCGCCGGTTGACATGCCGTTATGGAAA
GCCAGAAGCTGCAGGTACCGCAAGGGTTCAAAAACCACTATTAGCAGCTG
GTGTGGAGCGGACATCCCCTCCCAGTAACCCAACTGTGCCTCCAAGAGCC
GATAACGTGCCTATTGAGCCCACTGCAGCTCCATTGCGGGCGTGCAATCG
GGAGTCGCTGCTCACAGCGGACTGGCTGGAGAACATTCACATGGCTGACC
GGGTACCAACAGCAACCCCGAAATGGCTGCGAGATGGATTGGATGATCCA
GTAAGAGGGCGCAACTTAAACTTAAGCCTAAACGATGAGACGGGTTCTGC
AAGACCCCTACTGTCATTGCCATACATGAATCGATCCGCTATCGATGAGA
ATCCGGCGTCGATCAATTTGATCACCTTTGTACCCGCGAAATCGGAGGCT
CTGGATCTCTTTCGATACTATCATCGTTACGTCGACTATCTCTACCATAT
CATCGTCCCAAAGCGTGTCGAGGGCCAGATAAATGGGATTTATCGTTGTA
TTGAAAGCAATGCGCCCGTGGATCTCAACCACTTGGCGCTGCTTTTCGGC
ATTCTAGCCAGCTCTCTATGTCTACAACGATCAGTGGTGGCATCTACTGA
TGCAGAAGCGCGCAGCCAAGAGTTTGCCTTTCTCACTGGCGCTGCATTAA
TTCAAAGCCACTACTCTCTGTCTCCAACTCTTGTGGGCTTGCAGGCAACC
ATGGTGGTCATGCATAATGTCTCTAACTGGAACATTCCACCATCCGTGAG
CGGTCTCTTCGTACATGGTGCGATAGTCAGCCAAGCGAAGAGTCTCATGC
TGCACTGCATCGACTCCCCGCGCTTTCGGAATGAGAGAGAGGGAAGTGAT
TACGATGCAATAGATCTTGAAGTCAAGAGACGACTATGGTGGGATCTGAC
GTCTTTCGACTGGTAAGAGGTATTCGAGTGATGGATGGTCATGGCTGATT
AACAATTGCAGGCTACTGGGCTTTCTTACTGGCCCTCAAGAGTGGACGTA
CCTCATCCAGCCGCACCACATGAACGTGAACCAGCCATTGAATATCGATG
ATAATGCAATGTGCCACAACATGGTTTCAATGCCAAACTCCACACCAACA
GACATGTCCTTTTTCCTTCAACGCCTGACCCTAGCTGCTGTGAGCCGGGA
GGTAGTTGATGCAACATCCTACGAGCATCTCCATGGCTTAGAGCCAATTT
ACGAAAAAATACTCGAGCTAGACAAAAAGTTCCATCGAGCCGTGGCGGAG
ATTCCTGACTTCTTCCGCCTGGATCCATCATCCAGACGACGGTTTGCTTC
GCTCTACGAAGAGCGTCCGACCATTGCCTGGCAAGGCTGTCTCCTACAAC
AAGGCTTCTTCTCCCGCTTATGCCGTCTGCATCGAGATTTCTTCATCAGA
GGAGCTCGTGAACCAGCATATTCCTATTCCCACGTGATCTGCCTGCAGTC
TGCCCGGAAAGTGCTCGAGATTAAAAGAATCATGGATGGAAACGAACCGA
ACTACACCCCACCGAACTCTGTCGTCTGGTCCGTAATGCATCATGTATTC
GCTGCTGCTGTGATATTATTACTGGACGTGTGCTTCAATTGGGATGATAT
TCTAGCCGAGAAGCGAAAAGAAGAAGTGCTGGATGCCTGCCGCATGCTGA
GCAAGGCACAAGAGTCGTCTGCCCTGGTCAGGGAAGGAATCAACGCAATG
ATGGGTGTGTTGCAAAAGCATTGGAGAACCGGAAAGCAGGCTGAAAATCA
CACTATTATTTCACAAGGGGCGGATGGAGCGCGATCTCATCCTGGCTCTG
CACCGGCTCATGTCCCAGCTCTCAATGCTGAATCAAACGTCATGCCGCCA
CACCTCCCAGCTGCCACCAATGACAATGCACCTCATGAGAGGCAGCTGGA
AGATATCTGGACCGAGATGCTTGAGACGGGTAACGACCTGGCTCTGGATT
CTGCAGACTGGACGGAACTGTTGAATGAGCTGACAGACCCGGAGCTATCT
CGAGGATGATTTATGTACAAAAACTACCAGTCTCAGCCGGACTTTAGAGT
GCCGTCCTGGCCTTTACTTTCTAAGTAAGGTCTACGTCGCGCAACTTCAC
GCCGTTATGAAGAGAAGTACAATTACGGGAAATTAATAGAAGCTCTTGTA
TCATTTTAGCGACGGGTCTGGATAAAAAAAGTTATTACTTCAGAGGTCTG
TAAACACAAGATATTCTCTAAGCAATAAAAATATATAACTGCT

Coding sequence (CDS) from alignment at ch7:2032006..2034548-

>KJC3_009996-T1 ID=KJC3_009996-T1|Name=KJC3_009996-T1|organism=Aspergillus niger KJC3|type=CDS|length=4242bp|location=Sequence derived from alignment at ch7:2032006..2034548- (Aspergillus niger KJC3)
GCTACTGGGCTTTCTTACTGGCCCTCAAGAGTGGACGTACCTCATCCAGC
CGCACCACATGAACGTGAACCAGCCATTGAATATCGATGATAATGCAATG
TGCCACAACATGGTTTCAATGCCAAACTCCACACCAACAGACATGTCCTT
TTTCCTTCAACGCCTGACCCTAGCTGCTGTGAGCCGGGAGGTAGTTGATG
CAACATCCTACGAGCATCTCCATGGCTTAGAGCCAATTTACGAAAAAATA
CTCGAGCTAGACAAAAAGTTCCATCGAGCCGTGGCGGAGATTCCTGACTT
CTTCCGCCTGGATCCATCATCCAGACGACGGTTTGCTTCGCTCTACGAAG
AGCGTCCGACCATTGCCTGGCAAGGCTGTCTCCTACAACAAGGCTTCTTC
TCCCGCTTATGCCGTCTGCATCGAGATTTCTTCATCAGAGGAGCTCGTGA
ACCAGCATATTCCTATTCCCACGTGATCTGCCTGCAGTCTGCCCGGAAAG
TGCTCGAGATTAAAAGAATCATGGATGGAAACGAACCGAACTACACCCCA
CCGAACTCTGTCGTCTGGTCCGTAATGCATCATGTATTCGCTGCTGCTGT
GATATTATTACTGGACGTGTGCTTCAATTGGGATGATATTCTAGCCGAGA
AGCGAAAAGAAGAAGTGCTGGATGCCTGCCGCATGCTGAGCAAGGCACAA
GAGTCGTCTGCCCTGGTCAGGGAAGGAATCAACGCAATGATGGGTGTGTT
GCAAAAGCATTGGAGAACCGGAAAGCAGGCTGAAAATCACACTATTATTT
CACAAGGGGCGGATGGAGCGCGATCTCATCCTGGCTCTGCACCGGCTCAT
GTCCCAGCTCTCAATGCTGAATCAAACGTCATGCCGCCACACCTCCCAGC
TGCCACCAATGACAATGCACCTCATGAGAGGCAGCTGGAAGATATCTGGA
CCGAGATGCTTGAGACGGGTAACGACCTGGCTCTGGATTCTGCAGACTGG
ACGGAACTGTTGAATGAGCTGACAGACCCGGAGCTATCTCGAGGATGAAT
GAAGCGCAAAGCTGCATTCCAGCTGCCTCATACCCCCCGACGCGCTCCGC
GGCAGGACCCCGTGTCTTGCGACTCTTGTCGGCTCAAGAAGATTAAATGC
GATCGCCAGCAGCCATGCAGCAGTTGCTCTGCGCGCCGGTTGACATGCCG
TTATGGAAAGCCAGAAGCTGCAGGTACCGCAAGGGTTCAAAAACCACTAT
TAGCAGCTGGTGTGGAGCGGACATCCCCTCCCAGTAACCCAACTGTGCCT
CCAAGAGCCGATAACGTGCCTATTGAGCCCACTGCAGCTCCATTGCGGGC
GTGCAATCGGGAGTCGCTGCTCACAGCGGACTGGCTGGAGAACATTCACA
TGGCTGACCGGGTACCAACAGCAACCCCGAAATGGCTGCGAGATGGATTG
GATGATCCAGTAAGAGGGCGCAACTTAAACTTAAGCCTAAACGATGAGAC
GGGTTCTGCAAGACCCCTACTGTCATTGCCATACATGAATCGATCCGCTA
TCGATGAGAATCCGGCGTCGATCAATTTGATCACCTTTGTACCCGCGAAA
TCGGAGGCTCTGGATCTCTTTCGATACTATCATCGTTACGTCGACTATCT
CTACCATATCATCGTCCCAAAGCGTGTCGAGGGCCAGATAAATGGGATTT
ATCGTTGTATTGAAAGCAATGCGCCCGTGGATCTCAACCACTTGGCGCTG
CTTTTCGGCATTCTAGCCAGCTCTCTATGTCTACAACGATCAGTGGTGGC
ATCTACTGATGCAGAAGCGCGCAGCCAAGAGTTTGCCTTTCTCACTGGCG
CTGCATTAATTCAAAGCCACTACTCTCTGTCTCCAACTCTTGTGGGCTTG
CAGGCAACCATGGTGGTCATGCATAATGTCTCTAACTGGAACATTCCACC
ATCCGTGAGCGGTCTCTTCGTACATGGTGCGATAGTCAGCCAAGCGAAGA
GTCTCATGCTGCACTGCATCGACTCCCCGCGCTTTCGGAATGAGAGAGAG
GGAAGTGATTACGATGCAATAGATCTTGAAGTCAAGAGACGACTATGGTG
GGATCTGACGTCTTTCGACTGGCTACTGGGCTTTCTTACTGGCCCTCAAG
AGTGGACGTACCTCATCCAGCCGCACCACATGAACGTGAACCAGCCATTG
AATATCGATGATAATGCAATGTGCCACAACATGGTTTCAATGCCAAACTC
CACACCAACAGACATGTCCTTTTTCCTTCAACGCCTGACCCTAGCTGCTG
TGAGCCGGGAGGTAGTTGATGCAACATCCTACGAGCATCTCCATGGCTTA
GAGCCAATTTACGAAAAAATACTCGAGCTAGACAAAAAGTTCCATCGAGC
CGTGGCGGAGATTCCTGACTTCTTCCGCCTGGATCCATCATCCAGACGAC
GGTTTGCTTCGCTCTACGAAGAGCGTCCGACCATTGCCTGGCAAGGCTGT
CTCCTACAACAAGGCTTCTTCTCCCGCTTATGCCGTCTGCATCGAGATTT
CTTCATCAGAGGAGCTCGTGAACCAGCATATTCCTATTCCCACGTGATCT
GCCTGCAGTCTGCCCGGAAAGTGCTCGAGATTAAAAGAATCATGGATGGA
AACGAACCGAACTACACCCCACCGAACTCTGTCGTCTGGTCCGTAATGCA
TCATGTATTCGCTGCTGCTGTGATATTATTACTGGACGTGTGCTTCAATT
GGGATGATATTCTAGCCGAGAAGCGAAAAGAAGAAGTGCTGGATGCCTGC
CGCATGCTGAGCAAGGCACAAGAGTCGTCTGCCCTGGTCAGGGAAGGAAT
CAACGCAATGATGGGTGTGTTGCAAAAGCATTGGAGAACCGGAAAGCAGG
CTGAAAATCACACTATTATTTCACAAGGGGCGGATGGAGCGCGATCTCAT
CCTGGCTCTGCACCGGCTCATGTCCCAGCTCTCAATGCTGAATCAAACGT
CATGCCGCCACACCTCCCAGCTGCCACCAATGACAATGCACCTCATGAGA
GGCAGCTGGAAGATATCTGGACCGAGATGCTTGAGACGGGTAACGACCTG
GCTCTGGATTCTGCAGACTGGACGGAACTGTTGAATGAGCTGACAGACCC
GGAGCTATCTCGAGGATGAATGAAGCGCAAAGCTGCATTCCAGCTGCCTC
ATACCCCCCGACGCGCTCCGCGGCAGGACCCCGTGTCTTGCGACTCTTGT
CGGCTCAAGAAGATTAAATGCGATCGCCAGCAGCCATGCAGCAGTTGCTC
TGCGCGCCGGTTGACATGCCGTTATGGAAAGCCAGAAGCTGCAGGTACCG
CAAGGGTTCAAAAACCACTATTAGCAGCTGGTGTGGAGCGGACATCCCCT
CCCAGTAACCCAACTGTGCCTCCAAGAGCCGATAACGTGCCTATTGAGCC
CACTGCAGCTCCATTGCGGGCGTGCAATCGGGAGTCGCTGCTCACAGCGG
ACTGGCTGGAGAACATTCACATGGCTGACCGGGTACCAACAGCAACCCCG
AAATGGCTGCGAGATGGATTGGATGATCCAGTAAGAGGGCGCAACTTAAA
CTTAAGCCTAAACGATGAGACGGGTTCTGCAAGACCCCTACTGTCATTGC
CATACATGAATCGATCCGCTATCGATGAGAATCCGGCGTCGATCAATTTG
ATCACCTTTGTACCCGCGAAATCGGAGGCTCTGGATCTCTTTCGATACTA
TCATCGTTACGTCGACTATCTCTACCATATCATCGTCCCAAAGCGTGTCG
AGGGCCAGATAAATGGGATTTATCGTTGTATTGAAAGCAATGCGCCCGTG
GATCTCAACCACTTGGCGCTGCTTTTCGGCATTCTAGCCAGCTCTCTATG
TCTACAACGATCAGTGGTGGCATCTACTGATGCAGAAGCGCGCAGCCAAG
AGTTTGCCTTTCTCACTGGCGCTGCATTAATTCAAAGCCACTACTCTCTG
TCTCCAACTCTTGTGGGCTTGCAGGCAACCATGGTGGTCATGCATAATGT
CTCTAACTGGAACATTCCACCATCCGTGAGCGGTCTCTTCGTACATGGTG
CGATAGTCAGCCAAGCGAAGAGTCTCATGCTGCACTGCATCGACTCCCCG
CGCTTTCGGAATGAGAGAGAGGGAAGTGATTACGATGCAATAGATCTTGA
AGTCAAGAGACGACTATGGTGGGATCTGACGTCTTTCGACTG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0042025	host cell nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_009996	KJC3_009996	Aspergillus niger KJC3	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_009996-T1	KJC3_009996-T1-protein	Aspergillus niger KJC3	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_009996-T1.cds	KJC3_009996-T1.cds	Aspergillus niger KJC3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_009996-T1.utr3p1	KJC3_009996-T1.utr3p1	Aspergillus niger KJC3	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_009996-T1.exon2	KJC3_009996-T1.exon2	Aspergillus niger KJC3	exon
KJC3_009996-T1.exon1	KJC3_009996-T1.exon1	Aspergillus niger KJC3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_009996-T1.utr5p1	KJC3_009996-T1.utr5p1	Aspergillus niger KJC3	five_prime_UTR

Properties


Property Name	Value
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch7	supercontig	ch7:2032006..2034548 -

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KJC3_009996-T1, KJC3_009996-T1 (mRNA) Aspergillus niger KJC3