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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2034706..2036449+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009997-T1 ID=KJC3_009997-T1|Name=KJC3_009997-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1744bp|location=Sequence derived from alignment at ch7:2034706..2036449+ (Aspergillus niger KJC3)
CGGAGGGTCCGGGGGGTTATACTGTCAATACATAGCCCTCAAATACATTA
TATATATGCGCTCAGGGTTCTGTTTTCGATAAACATGTTTCCATCAACCC
ATAGATCACATCGAGCTGCACTGTACGCTCACTATCTAAGTTCAGCTTCA
CCTTGTCAAATCTGACTAGCAACCATGGCTCACGCTGAAGATGCTCCTAC
TGACTCGCCTCCCTCCGAATACACGTAAGTCACCCATCCCAAACCATACA
CATATCATCAACAACTTCCAGGCCGCGAGCAGTGCAGACCCTCCTGGGCT
CATTTTGCGGCATGTTCTGCACTGTTGGCTTCGTGAACTCCTTCGGCCTA
TTCCTAGAGTACTACAAAAAGGACCAACTATCAGACCAACCCGAATCGAC
CATCGCATGGATAGCAGCCATCGACATCTTCTTCATTTTTGGTGTATCTG
TCGTATCCGGGCCTCTCCTGGACACGATCGGCCCACGAGTCAGTACCCTA
TACTATCAACATAACACTATACAAACCCCCAGCTAACTGAAAGGTCTAGC
TCCTCCTCTGCATCGGCTCCCTCGGCTCCGTCTTCTCAATCATGATGACC
TCCCTCTGCAAAGAACTCTACCAATTCATCCTCGCGCAAGGCATCCTCCT
CGGCATCTCCCTATCCCTTCTCACCTGTCCCATGATCGCCCTCGTCGGCC
AACACATCAAGATCAAGCGCGGCGCAGCAGTCGGCATCGTCATCGGAGGA
TCCTCTCTCGGTGGTGTCCTCTGGCCGATCATCGTCAACGAACTGCTACA
GAAACCTAACATCGGGTTCGGATGGACCATGCGCATCGTCGGGTTTATTA
TGTTGCCGCTGCTTACAGTGACTTGTTTTTGTTGTCAGCCTGCTGCACCA
CCGCCATCACCATCACCATCCCAATATCAGCCAGAACCACAATCAGAGAA
ATCCTCACCCGAACCCCAATCCCCGGATCCCACTAAAGATACAGAAACCC
CCCTCCTCCAAAACCGCACCCTCCACCTAACCTGCCTCTCTTTCTTCATC
ATCTACTTCGGCATGTTCTCGCCCTTTTTCTACGTCTCTAGCTACGGGGT
AGCGCGGGGCTTTTCCTCCTCCTTGTCGTTCTACACCATATCCATGCTGA
ACGGCGCATCCCTCTTCGGGAGGGTCATTCCCGGTATACTAGCGGATAAA
TACGGACGGTTTAACGTCTGTATCGTCTTTACGATTCTCGCGGGGATAGT
TGCCCTCTGTTGGACGAAGGCGACGAGTGTGGCGGGGCTGGTGGTGTTTT
CGATAGCGTATGGGTTTTCTTCTGGTGTGAGTATAATTTTCCCTTCCTTG
TTTTATGCTCTTGGGGAAAGTGGGAAGAAGATGGCTAATAGTGTGGGTCT
GGGATAGGCTATTCTCTCTCTCCAGCAAGCGTGCGCGTTGCAGTTGGCGA
CGCCGAAGACGGTGGGGTTGGCGGTGGGGGTTGTTATGGGGGCTACGGCT
TTAAGGTATGCACATTATGATTTGTTTTAAATTGTGCTTCTTGGGGAGTA
AGGGTGGTTTTTGCTAATCATATCTTATCTGGGAGTGTAGTGCTATGGCT
GGGATACCTATTTCCGGGGCGCTGGTGCAGAAGTATGGGTTTCTGGCGCT
GTCGATATACGCCGGGGTGAGTCTGCTCGTGGGTGGGTTGTTGTTGTGTG
TGGCGAGGGGGGCGCAGAGTATGGAGTTGAGGGCTGTTGTTTAG back to topCoding sequence (CDS) from alignment at ch7:2034706..2036449+ >KJC3_009997-T1 ID=KJC3_009997-T1|Name=KJC3_009997-T1|organism=Aspergillus niger KJC3|type=CDS|length=6480bp|location=Sequence derived from alignment at ch7:2034706..2036449+ (Aspergillus niger KJC3)
ATGGCTCACGCTGAAGATGCTCCTACTGACTCGCCTCCCTCCGAATACAC
GCCGCGAGCAGTGCAGACCCTCCTGGGCTCATTTTGCGGCATGTTCTGCA
CTGTTGGCTTCGTGAACTCCTTCGGCCTATTCCTAGAGTACTACAAAAAG
GACCAACTATCAGACCAACCCGAATCGACCATCGCATGGATAGCAGCCAT
CGACATCTTCTTCATTTTTGGTGTATCTGTCGTATCCGGGCCTCTCCTGG
ACACGATCGGCCCACGACTCCTCCTCTGCATCGGCTCCCTCGGCTCCGTC
TTCTCAATCATGATGACCTCCCTCTGCAAAGAACTCTACCAATTCATCCT
CGCGCAAGGCATCCTCCTCGGCATCTCCCTATCCCTTCTCACCTGTCCCA
TGATCGCCCTCGTCGGCCAACACATCAAGATCAAGCGCGGCGCAGCAGTC
GGCATCGTCATCGGAGGATCCTCTCTCGGTGGTGTCCTCTGGCCGATCAT
CGTCAACGAACTGCTACAGAAACCTAACATCGGGTTCGGATGGACCATGC
GCATCGTCGGGTTTATTATGTTGCCGCTGCTTACAGTGACTTGTTTTTGT
TGTCAGCCTGCTGCACCACCGCCATCACCATCACCATCCCAATATCAGCC
AGAACCACAATCAGAGAAATCCTCACCCGAACCCCAATCCCCGGATCCCA
CTAAAGATACAGAAACCCCCCTCCTCCAAAACCGCACCCTCCACCTAACC
TGCCTCTCTTTCTTCATCATCTACTTCGGCATGTTCTCGCCCTTTTTCTA
CGTCTCTAGCTACGGGGTAGCGCGGGGCTTTTCCTCCTCCTTGTCGTTCT
ACACCATATCCATGCTGAACGGCGCATCCCTCTTCGGGAGGGTCATTCCC
GGTATACTAGCGGATAAATACGGACGGTTTAACGTCTGTATCGTCTTTAC
GATTCTCGCGGGGATAGTTGCCCTCTGTTGGACGAAGGCGACGAGTGTGG
CGGGGCTGGTGGTGTTTTCGATAGCGTATGGGTTTTCTTCTGGTGCTATT
CTCTCTCTCCAGCAAGCGTGCGCGTTGCAGTTGGCGACGCCGAAGACGGT
GGGGTTGGCGGTGGGGGTTGTTATGGGGGCTACGGCTTTAAGTGCTATGG
CTGGGATACCTATTTCCGGGGCGCTGGTGCAGAAGTATGGGTTTCTGGCG
CTGTCGATATACGCCGGGGTGAGTCTGCTCGTGGGTGGGTTGTTGTTGTG
TGTGGCGAGGGGGGCGCAGAGTATGGAGTTGAGGGCTGTTGTTTAGATGG
CTCACGCTGAAGATGCTCCTACTGACTCGCCTCCCTCCGAATACACGCCG
CGAGCAGTGCAGACCCTCCTGGGCTCATTTTGCGGCATGTTCTGCACTGT
TGGCTTCGTGAACTCCTTCGGCCTATTCCTAGAGTACTACAAAAAGGACC
AACTATCAGACCAACCCGAATCGACCATCGCATGGATAGCAGCCATCGAC
ATCTTCTTCATTTTTGGTGTATCTGTCGTATCCGGGCCTCTCCTGGACAC
GATCGGCCCACGACTCCTCCTCTGCATCGGCTCCCTCGGCTCCGTCTTCT
CAATCATGATGACCTCCCTCTGCAAAGAACTCTACCAATTCATCCTCGCG
CAAGGCATCCTCCTCGGCATCTCCCTATCCCTTCTCACCTGTCCCATGAT
CGCCCTCGTCGGCCAACACATCAAGATCAAGCGCGGCGCAGCAGTCGGCA
TCGTCATCGGAGGATCCTCTCTCGGTGGTGTCCTCTGGCCGATCATCGTC
AACGAACTGCTACAGAAACCTAACATCGGGTTCGGATGGACCATGCGCAT
CGTCGGGTTTATTATGTTGCCGCTGCTTACAGTGACTTGTTTTTGTTGTC
AGCCTGCTGCACCACCGCCATCACCATCACCATCCCAATATCAGCCAGAA
CCACAATCAGAGAAATCCTCACCCGAACCCCAATCCCCGGATCCCACTAA
AGATACAGAAACCCCCCTCCTCCAAAACCGCACCCTCCACCTAACCTGCC
TCTCTTTCTTCATCATCTACTTCGGCATGTTCTCGCCCTTTTTCTACGTC
TCTAGCTACGGGGTAGCGCGGGGCTTTTCCTCCTCCTTGTCGTTCTACAC
CATATCCATGCTGAACGGCGCATCCCTCTTCGGGAGGGTCATTCCCGGTA
TACTAGCGGATAAATACGGACGGTTTAACGTCTGTATCGTCTTTACGATT
CTCGCGGGGATAGTTGCCCTCTGTTGGACGAAGGCGACGAGTGTGGCGGG
GCTGGTGGTGTTTTCGATAGCGTATGGGTTTTCTTCTGGTGCTATTCTCT
CTCTCCAGCAAGCGTGCGCGTTGCAGTTGGCGACGCCGAAGACGGTGGGG
TTGGCGGTGGGGGTTGTTATGGGGGCTACGGCTTTAAGTGCTATGGCTGG
GATACCTATTTCCGGGGCGCTGGTGCAGAAGTATGGGTTTCTGGCGCTGT
CGATATACGCCGGGGTGAGTCTGCTCGTGGGTGGGTTGTTGTTGTGTGTG
GCGAGGGGGGCGCAGAGTATGGAGTTGAGGGCTGTTGTTTAGATGGCTCA
CGCTGAAGATGCTCCTACTGACTCGCCTCCCTCCGAATACACGCCGCGAG
CAGTGCAGACCCTCCTGGGCTCATTTTGCGGCATGTTCTGCACTGTTGGC
TTCGTGAACTCCTTCGGCCTATTCCTAGAGTACTACAAAAAGGACCAACT
ATCAGACCAACCCGAATCGACCATCGCATGGATAGCAGCCATCGACATCT
TCTTCATTTTTGGTGTATCTGTCGTATCCGGGCCTCTCCTGGACACGATC
GGCCCACGACTCCTCCTCTGCATCGGCTCCCTCGGCTCCGTCTTCTCAAT
CATGATGACCTCCCTCTGCAAAGAACTCTACCAATTCATCCTCGCGCAAG
GCATCCTCCTCGGCATCTCCCTATCCCTTCTCACCTGTCCCATGATCGCC
CTCGTCGGCCAACACATCAAGATCAAGCGCGGCGCAGCAGTCGGCATCGT
CATCGGAGGATCCTCTCTCGGTGGTGTCCTCTGGCCGATCATCGTCAACG
AACTGCTACAGAAACCTAACATCGGGTTCGGATGGACCATGCGCATCGTC
GGGTTTATTATGTTGCCGCTGCTTACAGTGACTTGTTTTTGTTGTCAGCC
TGCTGCACCACCGCCATCACCATCACCATCCCAATATCAGCCAGAACCAC
AATCAGAGAAATCCTCACCCGAACCCCAATCCCCGGATCCCACTAAAGAT
ACAGAAACCCCCCTCCTCCAAAACCGCACCCTCCACCTAACCTGCCTCTC
TTTCTTCATCATCTACTTCGGCATGTTCTCGCCCTTTTTCTACGTCTCTA
GCTACGGGGTAGCGCGGGGCTTTTCCTCCTCCTTGTCGTTCTACACCATA
TCCATGCTGAACGGCGCATCCCTCTTCGGGAGGGTCATTCCCGGTATACT
AGCGGATAAATACGGACGGTTTAACGTCTGTATCGTCTTTACGATTCTCG
CGGGGATAGTTGCCCTCTGTTGGACGAAGGCGACGAGTGTGGCGGGGCTG
GTGGTGTTTTCGATAGCGTATGGGTTTTCTTCTGGTGCTATTCTCTCTCT
CCAGCAAGCGTGCGCGTTGCAGTTGGCGACGCCGAAGACGGTGGGGTTGG
CGGTGGGGGTTGTTATGGGGGCTACGGCTTTAAGTGCTATGGCTGGGATA
CCTATTTCCGGGGCGCTGGTGCAGAAGTATGGGTTTCTGGCGCTGTCGAT
ATACGCCGGGGTGAGTCTGCTCGTGGGTGGGTTGTTGTTGTGTGTGGCGA
GGGGGGCGCAGAGTATGGAGTTGAGGGCTGTTGTTTAGATGGCTCACGCT
GAAGATGCTCCTACTGACTCGCCTCCCTCCGAATACACGCCGCGAGCAGT
GCAGACCCTCCTGGGCTCATTTTGCGGCATGTTCTGCACTGTTGGCTTCG
TGAACTCCTTCGGCCTATTCCTAGAGTACTACAAAAAGGACCAACTATCA
GACCAACCCGAATCGACCATCGCATGGATAGCAGCCATCGACATCTTCTT
CATTTTTGGTGTATCTGTCGTATCCGGGCCTCTCCTGGACACGATCGGCC
CACGACTCCTCCTCTGCATCGGCTCCCTCGGCTCCGTCTTCTCAATCATG
ATGACCTCCCTCTGCAAAGAACTCTACCAATTCATCCTCGCGCAAGGCAT
CCTCCTCGGCATCTCCCTATCCCTTCTCACCTGTCCCATGATCGCCCTCG
TCGGCCAACACATCAAGATCAAGCGCGGCGCAGCAGTCGGCATCGTCATC
GGAGGATCCTCTCTCGGTGGTGTCCTCTGGCCGATCATCGTCAACGAACT
GCTACAGAAACCTAACATCGGGTTCGGATGGACCATGCGCATCGTCGGGT
TTATTATGTTGCCGCTGCTTACAGTGACTTGTTTTTGTTGTCAGCCTGCT
GCACCACCGCCATCACCATCACCATCCCAATATCAGCCAGAACCACAATC
AGAGAAATCCTCACCCGAACCCCAATCCCCGGATCCCACTAAAGATACAG
AAACCCCCCTCCTCCAAAACCGCACCCTCCACCTAACCTGCCTCTCTTTC
TTCATCATCTACTTCGGCATGTTCTCGCCCTTTTTCTACGTCTCTAGCTA
CGGGGTAGCGCGGGGCTTTTCCTCCTCCTTGTCGTTCTACACCATATCCA
TGCTGAACGGCGCATCCCTCTTCGGGAGGGTCATTCCCGGTATACTAGCG
GATAAATACGGACGGTTTAACGTCTGTATCGTCTTTACGATTCTCGCGGG
GATAGTTGCCCTCTGTTGGACGAAGGCGACGAGTGTGGCGGGGCTGGTGG
TGTTTTCGATAGCGTATGGGTTTTCTTCTGGTGCTATTCTCTCTCTCCAG
CAAGCGTGCGCGTTGCAGTTGGCGACGCCGAAGACGGTGGGGTTGGCGGT
GGGGGTTGTTATGGGGGCTACGGCTTTAAGTGCTATGGCTGGGATACCTA
TTTCCGGGGCGCTGGTGCAGAAGTATGGGTTTCTGGCGCTGTCGATATAC
GCCGGGGTGAGTCTGCTCGTGGGTGGGTTGTTGTTGTGTGTGGCGAGGGG
GGCGCAGAGTATGGAGTTGAGGGCTGTTGTTTAGATGGCTCACGCTGAAG
ATGCTCCTACTGACTCGCCTCCCTCCGAATACACGCCGCGAGCAGTGCAG
ACCCTCCTGGGCTCATTTTGCGGCATGTTCTGCACTGTTGGCTTCGTGAA
CTCCTTCGGCCTATTCCTAGAGTACTACAAAAAGGACCAACTATCAGACC
AACCCGAATCGACCATCGCATGGATAGCAGCCATCGACATCTTCTTCATT
TTTGGTGTATCTGTCGTATCCGGGCCTCTCCTGGACACGATCGGCCCACG
ACTCCTCCTCTGCATCGGCTCCCTCGGCTCCGTCTTCTCAATCATGATGA
CCTCCCTCTGCAAAGAACTCTACCAATTCATCCTCGCGCAAGGCATCCTC
CTCGGCATCTCCCTATCCCTTCTCACCTGTCCCATGATCGCCCTCGTCGG
CCAACACATCAAGATCAAGCGCGGCGCAGCAGTCGGCATCGTCATCGGAG
GATCCTCTCTCGGTGGTGTCCTCTGGCCGATCATCGTCAACGAACTGCTA
CAGAAACCTAACATCGGGTTCGGATGGACCATGCGCATCGTCGGGTTTAT
TATGTTGCCGCTGCTTACAGTGACTTGTTTTTGTTGTCAGCCTGCTGCAC
CACCGCCATCACCATCACCATCCCAATATCAGCCAGAACCACAATCAGAG
AAATCCTCACCCGAACCCCAATCCCCGGATCCCACTAAAGATACAGAAAC
CCCCCTCCTCCAAAACCGCACCCTCCACCTAACCTGCCTCTCTTTCTTCA
TCATCTACTTCGGCATGTTCTCGCCCTTTTTCTACGTCTCTAGCTACGGG
GTAGCGCGGGGCTTTTCCTCCTCCTTGTCGTTCTACACCATATCCATGCT
GAACGGCGCATCCCTCTTCGGGAGGGTCATTCCCGGTATACTAGCGGATA
AATACGGACGGTTTAACGTCTGTATCGTCTTTACGATTCTCGCGGGGATA
GTTGCCCTCTGTTGGACGAAGGCGACGAGTGTGGCGGGGCTGGTGGTGTT
TTCGATAGCGTATGGGTTTTCTTCTGGTGCTATTCTCTCTCTCCAGCAAG
CGTGCGCGTTGCAGTTGGCGACGCCGAAGACGGTGGGGTTGGCGGTGGGG
GTTGTTATGGGGGCTACGGCTTTAAGTGCTATGGCTGGGATACCTATTTC
CGGGGCGCTGGTGCAGAAGTATGGGTTTCTGGCGCTGTCGATATACGCCG
GGGTGAGTCTGCTCGTGGGTGGGTTGTTGTTGTGTGTGGCGAGGGGGGCG
CAGAGTATGGAGTTGAGGGCTGTTGTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009997-T1.utr5p1 | KJC3_009997-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2034706..2036449 + |
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