You are here

Home

KJC3_010003-T1, KJC3_010003-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010003-T1
Unique NameKJC3_010003-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2050329..2051572-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010003-T1 ID=KJC3_010003-T1|Name=KJC3_010003-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1244bp|location=Sequence derived from alignment at ch7:2050329..2051572- (Aspergillus niger KJC3)
GCAGCTTTGCACCAGACCAACTCACTCCAGTTCCACCACAATCACATCTC
ATAACCCATCATGCCTAAGCGCAGCAAGCTCCTTCAAGCTCTGGACGAGC
ACCGCGGCCGCGACTACGAGGCCGAGAAGCAGAAGAAGCTCATCAAGGCG
GCGAAGAAGAAGACCACCGCTACCAAGGGTGAAGATGTGAAGGAGGCTGT
TGTTGAAGATAAGAAGGAGGAGAAGAAGAAGGAGGAAGAAGTTGAGGAGG
AATCCGAAGACGAAGAAACCCCCGAAGAAACCCCCTCCGACGCCGAAGAA
GAGGAAGAAGAAGAAGAAGACGACGAAGAAGAAGCCGAAGAATCCGACAT
CCCCCTCAGCGACCTCAGCGACGACGAACGCGAAGACGTCGTCACCCACC
AACGCCTCACAATCAACAACAGTGCCGCCATCACCAGCAGTCTAAAGCGC
ATCTCGTTCCTCACCCCCGCGACTCCCTTCTCCGAGCACAACAGTCTCGT
ATCGCAGGAACCGATTGAAGTGCCCGACGCCAACGATGACCTGAACCGCG
AACTGGCCTTCTACAAGGTCTGCCAGGCGGCGGCGATGACGGCCCGGAGT
ACCCTGAAGAAGGAAGGTGTGCCGTTTACGCGACCCGGCGATTACTTCGC
CGAGATGGTGAAGACGGATGAGCACATGGGCAAGATCAAGAAGAAGTTGT
ATGATGAGGCGGCGGCGAAGAAGGCCGCGGCGGAGGCCAGGAAGCAGCGT
GATTTGAAGAAGTTTGGAAAGCAGGTGCAGGTTGCGAAGTTGCAGCAGAG
GGCAAAGGAGAAGAGGGAGACGTTGGAGAAGATTAATGCGTTGAAGAAGA
GTATGTTTATCCCGTGGTTTCATTTTCGGGTGGTTGGCCTTTGTGGGTTT
GAAAGTGGTTGCTAACTGTTTGGGTGTGTGCAGAGCGCAAGGCTGATACC
GGCGGCCCTACTGATGATTCGTCCAACATGTTCGATGTCGCTATTGATGA
TGCTGCTCAGGCGGGTGGTCGCAAGCGCGGTCGTGATGCCGAGGGTGGTC
CGTCGATGAAGCGCCAGAAGAAGAATGAGAAGTTCGGGTTCGGTGGTAAG
AAGCGCTTTGCTAAGAGCGGTGATGCTGTCTCGAGTGGTGATATGCGCGA
CTTCTCTGTCAAGAAGATGAAGGGCGGTCCTAAGGGCGGTGGTGCCAAGC
GGCCGGGCAAGAGCAGGAGGGCTGCTGCTAAGGGCCGTTCTTGA
back to top

Coding sequence (CDS) from alignment at ch7:2050329..2051572-

>KJC3_010003-T1 ID=KJC3_010003-T1|Name=KJC3_010003-T1|organism=Aspergillus niger KJC3|type=CDS|length=2202bp|location=Sequence derived from alignment at ch7:2050329..2051572- (Aspergillus niger KJC3)
AGCGCAAGGCTGATACCGGCGGCCCTACTGATGATTCGTCCAACATGTTC
GATGTCGCTATTGATGATGCTGCTCAGGCGGGTGGTCGCAAGCGCGGTCG
TGATGCCGAGGGTGGTCCGTCGATGAAGCGCCAGAAGAAGAATGAGAAGT
TCGGGTTCGGTGGTAAGAAGCGCTTTGCTAAGAGCGGTGATGCTGTCTCG
AGTGGTGATATGCGCGACTTCTCTGTCAAGAAGATGAAGGGCGGTCCTAA
GGGCGGTGGTGCCAAGCGGCCGGGCAAGAGCAGGAGGGCTGCTGCTAAGG
GCCGTTCTTGAATGCCTAAGCGCAGCAAGCTCCTTCAAGCTCTGGACGAG
CACCGCGGCCGCGACTACGAGGCCGAGAAGCAGAAGAAGCTCATCAAGGC
GGCGAAGAAGAAGACCACCGCTACCAAGGGTGAAGATGTGAAGGAGGCTG
TTGTTGAAGATAAGAAGGAGGAGAAGAAGAAGGAGGAAGAAGTTGAGGAG
GAATCCGAAGACGAAGAAACCCCCGAAGAAACCCCCTCCGACGCCGAAGA
AGAGGAAGAAGAAGAAGAAGACGACGAAGAAGAAGCCGAAGAATCCGACA
TCCCCCTCAGCGACCTCAGCGACGACGAACGCGAAGACGTCGTCACCCAC
CAACGCCTCACAATCAACAACAGTGCCGCCATCACCAGCAGTCTAAAGCG
CATCTCGTTCCTCACCCCCGCGACTCCCTTCTCCGAGCACAACAGTCTCG
TATCGCAGGAACCGATTGAAGTGCCCGACGCCAACGATGACCTGAACCGC
GAACTGGCCTTCTACAAGGTCTGCCAGGCGGCGGCGATGACGGCCCGGAG
TACCCTGAAGAAGGAAGGTGTGCCGTTTACGCGACCCGGCGATTACTTCG
CCGAGATGGTGAAGACGGATGAGCACATGGGCAAGATCAAGAAGAAGTTG
TATGATGAGGCGGCGGCGAAGAAGGCCGCGGCGGAGGCCAGGAAGCAGCG
TGATTTGAAGAAGTTTGGAAAGCAGGTGCAGGTTGCGAAGTTGCAGCAGA
GGGCAAAGGAGAAGAGGGAGACGTTGGAGAAGATTAATGCGTTGAAGAAG
AAGCGCAAGGCTGATACCGGCGGCCCTACTGATGATTCGTCCAACATGTT
CGATGTCGCTATTGATGATGCTGCTCAGGCGGGTGGTCGCAAGCGCGGTC
GTGATGCCGAGGGTGGTCCGTCGATGAAGCGCCAGAAGAAGAATGAGAAG
TTCGGGTTCGGTGGTAAGAAGCGCTTTGCTAAGAGCGGTGATGCTGTCTC
GAGTGGTGATATGCGCGACTTCTCTGTCAAGAAGATGAAGGGCGGTCCTA
AGGGCGGTGGTGCCAAGCGGCCGGGCAAGAGCAGGAGGGCTGCTGCTAAG
GGCCGTTCTTGAATGCCTAAGCGCAGCAAGCTCCTTCAAGCTCTGGACGA
GCACCGCGGCCGCGACTACGAGGCCGAGAAGCAGAAGAAGCTCATCAAGG
CGGCGAAGAAGAAGACCACCGCTACCAAGGGTGAAGATGTGAAGGAGGCT
GTTGTTGAAGATAAGAAGGAGGAGAAGAAGAAGGAGGAAGAAGTTGAGGA
GGAATCCGAAGACGAAGAAACCCCCGAAGAAACCCCCTCCGACGCCGAAG
AAGAGGAAGAAGAAGAAGAAGACGACGAAGAAGAAGCCGAAGAATCCGAC
ATCCCCCTCAGCGACCTCAGCGACGACGAACGCGAAGACGTCGTCACCCA
CCAACGCCTCACAATCAACAACAGTGCCGCCATCACCAGCAGTCTAAAGC
GCATCTCGTTCCTCACCCCCGCGACTCCCTTCTCCGAGCACAACAGTCTC
GTATCGCAGGAACCGATTGAAGTGCCCGACGCCAACGATGACCTGAACCG
CGAACTGGCCTTCTACAAGGTCTGCCAGGCGGCGGCGATGACGGCCCGGA
GTACCCTGAAGAAGGAAGGTGTGCCGTTTACGCGACCCGGCGATTACTTC
GCCGAGATGGTGAAGACGGATGAGCACATGGGCAAGATCAAGAAGAAGTT
GTATGATGAGGCGGCGGCGAAGAAGGCCGCGGCGGAGGCCAGGAAGCAGC
GTGATTTGAAGAAGTTTGGAAAGCAGGTGCAGGTTGCGAAGTTGCAGCAG
AGGGCAAAGGAGAAGAGGGAGACGTTGGAGAAGATTAATGCGTTGAAGAA
GA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010003KJC3_010003Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010003-T1KJC3_010003-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010003-T1.cdsKJC3_010003-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010003-T1.exon2KJC3_010003-T1.exon2Aspergillus niger KJC3exon
KJC3_010003-T1.exon1KJC3_010003-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010003-T1.utr5p1KJC3_010003-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265GXF
DBxrefInterPro:IPR008610
DBxrefPFAM:PF05890
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2050329..2051572 -
Powered by Drupal