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KJC3_010004-T1, KJC3_010004-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010004-T1
Unique NameKJC3_010004-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2052828..2054041+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010004-T1 ID=KJC3_010004-T1|Name=KJC3_010004-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1214bp|location=Sequence derived from alignment at ch7:2052828..2054041+ (Aspergillus niger KJC3)
ATGCCGTTGTCATACGACAAGTTGGATCCCAGTGCCAGTCAGATCCGTCT
TTTAACTATCATTCCCGACGAGAATGACGAGAACCCTGTTTGTGGATCGC
TCCATACCGTGTCTCTCAACGACACCTGCGACTTTGACGCCCTGTCCTAC
GTATGGGGCGACACTTCTGTGACTGTTGACATCTCGGTTGATAATTGTAT
AGTCGGTGTAACACCAAATCTGCATGCTTTCCTGCGGAAAATTCGCCAGC
CGAATACAGAACGTACGGTATGGGTTGATTATGTCTGCATCAACCAGAAC
AATATCTCGGAGCGAAACTCGCAGGTTGCTTTGATGTGTCAAATCTATTC
GAATGCTAGGTCGGTGGTTGCTTGGTTGGGGGATCTGGCGCCGGAAGCTC
TGGAGCTCATTGAGTGGTATCATGCCAATCGAAATGGGTTTTACTTCGAA
AGCACAGGTCTTCATATTGATAAAGCTATAGAAAAGCTGTTGACTCCTGC
AAAAGCACTGTGTTCCTCGCCGTATTGGCATCGGGTATGGACATTTCAAG
AGTGGCATCTCTCAAAAATTGCCCCTGTCTGTATGCATGAAAAGACGACT
TTCACCATGGGAAACATATTTAATCGACTGCACGATGAAGTAGCGGTCGC
CAGGAGTAGGCTTACTTCTGATACTATCTCTTTGGACATGCCATACAGAG
CATATCCAAAGCCGGTAGTAGCTAACTCAAGATGTGCGCTTTTTTTGGGT
TGCAACGAAGACTCGACACACTTGTGAATTATATCCCGCGGGATATTCTG
CACCTCAATCCGTATACCCCGCGTCCATCGGGGCTTGGTGACTTGCTATC
GCTTACGAGGGACCGGCAATGCAGCAATGAACTCGATAAAGTATATGCGT
TATATGGGCTTTCTCCTGTGGCTAGGGTGACATACCCTCCCGACTATCGA
AAGACCATCGGCCAGGTCAACCATGAAACAACGTCATTTATATTGGGACA
CGAAGCCAATATGAATATATTCAATGACTTCGATTTCTGCTTCAATTCTG
CTAACAAAGACGAGTCACTCCCTTCATGGGTTGTTGACTTCACCACGACG
GATCCGAAACATCGCGAAAAGATGCAGCAAAGCTTCTCCAAGACGATGAA
TCTGGACAAGGCTCTCTGGGAGCAAAGTAGAGACCATGCTCCCATAGTAG
CAGATGATATGTAG
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Coding sequence (CDS) from alignment at ch7:2052828..2054041+

>KJC3_010004-T1 ID=KJC3_010004-T1|Name=KJC3_010004-T1|organism=Aspergillus niger KJC3|type=CDS|length=2034bp|location=Sequence derived from alignment at ch7:2052828..2054041+ (Aspergillus niger KJC3)
ATGCCGTTGTCATACGACAAGTTGGATCCCAGTGCCAGTCAGATCCGTCT
TTTAACTATCATTCCCGACGAGAATGACGAGAACCCTGTTTGTGGATCGC
TCCATACCGTGTCTCTCAACGACACCTGCGACTTTGACGCCCTGTCCTAC
GTATGGGGCGACACTTCTGTGACTGTTGACATCTCGGTTGATAATTGTAT
AGTCGGTGTAACACCAAATCTGCATGCTTTCCTGCGGAAAATTCGCCAGC
CGAATACAGAACGTACGGTATGGGTTGATTATGTCTGCATCAACCAGAAC
AATATCTCGGAGCGAAACTCGCAGGTTGCTTTGATGTGTCAAATCTATTC
GAATGCTAGGTCGGTGGTTGCTTGGTTGGGGGATCTGGCGCCGGAAGCTC
TGGAGCTCATTGAGTGGTATCATGCCAATCGAAATGGGTTTTACTTCGAA
AGCACAGGTCTTCATATTGATAAAGCTATAGAAAAGCTGTTGACTCCTGC
AAAAGCACTGTGTTCCTCGCCGTATTGGCATCGGATGTGCGCTTTTTTTG
GGTTGCAACGAAGACTCGACACACTTGTGAATTATATCCCGCGGGATATT
CTGCACCTCAATCCGTATACCCCGCGTCCATCGGGGCTTGGTGACTTGCT
ATCGCTTACGAGGGACCGGCAATGCAGCAATGAACTCGATAAAGTATATG
CGTTATATGGGCTTTCTCCTGTGGCTAGGGTGACATACCCTCCCGACTAT
CGAAAGACCATCGGCCAGGTCAACCATGAAACAACGTCATTTATATTGGG
ACACGAAGCCAATATGAATATATTCAATGACTTCGATTTCTGCTTCAATT
CTGCTAACAAAGACGAGTCACTCCCTTCATGGGTTGTTGACTTCACCACG
ACGGATCCGAAACATCGCGAAAAGATGCAGCAAAGCTTCTCCAAGACGAT
GAATCTGGACAAGGCTCTCTGGGAGCAAAGTAGAGACCATGCTCCCATAG
TAGCAGATGATATGTAGATGCCGTTGTCATACGACAAGTTGGATCCCAGT
GCCAGTCAGATCCGTCTTTTAACTATCATTCCCGACGAGAATGACGAGAA
CCCTGTTTGTGGATCGCTCCATACCGTGTCTCTCAACGACACCTGCGACT
TTGACGCCCTGTCCTACGTATGGGGCGACACTTCTGTGACTGTTGACATC
TCGGTTGATAATTGTATAGTCGGTGTAACACCAAATCTGCATGCTTTCCT
GCGGAAAATTCGCCAGCCGAATACAGAACGTACGGTATGGGTTGATTATG
TCTGCATCAACCAGAACAATATCTCGGAGCGAAACTCGCAGGTTGCTTTG
ATGTGTCAAATCTATTCGAATGCTAGGTCGGTGGTTGCTTGGTTGGGGGA
TCTGGCGCCGGAAGCTCTGGAGCTCATTGAGTGGTATCATGCCAATCGAA
ATGGGTTTTACTTCGAAAGCACAGGTCTTCATATTGATAAAGCTATAGAA
AAGCTGTTGACTCCTGCAAAAGCACTGTGTTCCTCGCCGTATTGGCATCG
GATGTGCGCTTTTTTTGGGTTGCAACGAAGACTCGACACACTTGTGAATT
ATATCCCGCGGGATATTCTGCACCTCAATCCGTATACCCCGCGTCCATCG
GGGCTTGGTGACTTGCTATCGCTTACGAGGGACCGGCAATGCAGCAATGA
ACTCGATAAAGTATATGCGTTATATGGGCTTTCTCCTGTGGCTAGGGTGA
CATACCCTCCCGACTATCGAAAGACCATCGGCCAGGTCAACCATGAAACA
ACGTCATTTATATTGGGACACGAAGCCAATATGAATATATTCAATGACTT
CGATTTCTGCTTCAATTCTGCTAACAAAGACGAGTCACTCCCTTCATGGG
TTGTTGACTTCACCACGACGGATCCGAAACATCGCGAAAAGATGCAGCAA
AGCTTCTCCAAGACGATGAATCTGGACAAGGCTCTCTGGGAGCAAAGTAG
AGACCATGCTCCCATAGTAGCAGATGATATGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010004KJC3_010004Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010004-T1.exon1KJC3_010004-T1.exon1Aspergillus niger KJC3exon
KJC3_010004-T1.exon2KJC3_010004-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010004-T1.cdsKJC3_010004-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010004-T1KJC3_010004-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010730
DBxrefPFAM:PF06985
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2052828..2054041 +
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