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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2062211..2064893- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010007-T1 ID=KJC3_010007-T1|Name=KJC3_010007-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2683bp|location=Sequence derived from alignment at ch7:2062211..2064893- (Aspergillus niger KJC3)
GAGGGGTTGGAGGCAGCAATGCCGCTAACTGCGCTTATCAAATCAGCTTC
CAGGGTTTGTTGACTTCACTTCATATCTATCTACCATGAGACTTGAAGAA
CTTTGACGGGTACGTATGTCAAAATTTTGGGCTCCTCATGCCTCTGAACC
AACCAATGCAGCCGTCCAAATCGGTGGAGAATGGGTTGGTCTTTCCGCGC
AATAAGGTCCAGGAGGCAAAGGCTGACCGAGTCGAGTCATATCCATAGTT
CCGTGCGGGAGGGAATCCACCGTGCCGCAGCGTGCATTCTTTAGTGCCGC
AGACCAGAAAATCCCTCTATAAAATTTGTCTCAGCCAGTCTCCCCGACTG
AATTACACCTCCCCTTGTAGACTGCTCCCTTTCCTTTCTCTTCTCAACTA
TCTTTTTTTCCTTCTTTGTATGAACAGAACTTCAGTGGAAATATTCGGCT
CCATATACTATGTTTCATGATCTTTAAGTTCTATCCAACAAAAGTCGTAT
TTTAGAGTGATCATTTGATACAATTTCTTTCACCGCATCTACTCCGATTA
TGACTTCTCCCCATACAACAGATGGAAAGCCACCATCATTTCTCCCTGCT
ACTGAGTCTACGCCATTGCTGCATGAGTCATCTCGTCAATCATTATATAC
AAGTCAAGACGATACGACTGTAGATAAGGATGTCGATCCAAGCCTGTCCT
CAACCATCTTCGCCCCCGAAGAGGACCCTGCGATACTTAGTCTCTCTAGA
GTCACCTCAATCCCCCAGGGGCTCGAAATTGAACCTAACCTCGAGAGACT
CCCTTCTGCCCCCGTGAGCCAGAAACAAGTGCCCGGGGATGCCGAAGATG
GAGTTGCCGGTGAGCCTACTGGCTATGCTTCACGTTTCATCAATGTCTCA
CCGATGAGATTCTGGCTTATCTTCTCTGGTATCTTGATGGGATACGTGAT
CGGATTTTTTGACTCCACGTTGATGGCTTCGAGTCACCCTGTTATAACCT
CCTACTTCCACGCCTCGAACTCCGCATCTTGGCTGTCGACGGCATTCCTA
TTGACGTCTACCGCTTTCCTCCCGCTGTTCGGACGCATTTCTGACACATT
TGGAAGGAAGCCAGTGTATCTTTTCGCCATTGCCATCTTTTTCGTCACTA
CGGCATGGTGTGCAGCCGCCCAGAGTATGTTCAGCTTCATCGCTGCTCGA
GCATTTTGCGGACTCGGAGCCGGTGGCGTATTCTCCATGGGTATGATTCT
CTCCAGTGATTTAGTACGCCTCGAATACCGAGGCGTCTACCAGTCCTACA
TCAATCTCTGTCTGGGTATTGGTGGCTGCCTTGGTTTGGCGTTTGGCGGG
TTCCTGTGCGACCAAGTGGGGTGGAGAGGTGCGTTCCTCGTGCAATTGCC
CTTCATCTTTGTTTACTTCATCGTGGCAGCTTGGACAACCCCTGCCGACT
TGGGCCTGAAGAGGGCGAAAACAGAGAGGAAGAGTTTGACGCAGCTCCTC
AAGAGCATTGATCTTGTGGGCTCACTCATACTTGTCGTCGGTGTGACTTC
ACTGATTATGGGACTAAACCTGGGTGGTAATGTGTTGAGCTGGTCTCACC
CCATTGTTATCACGTCCTTGATCTCATCTCTCATCTTAGCTGTTGTTTTT
GTTCGCTATGAGCGGACCGTGGAGCGGGGAGTGATGCCAATCTCGTTATT
GGTACAGGAGCCTCGCGCCAGCCTCATCTTTGGAAACTTCTTCGGCGCCA
TCTCCGTTAACACCATGGTCTTCAATGCGCCTCTGTATTTTCAGGCAGTC
AAACTAGCTACCCCGACTGACTCAGGTCTCAGGCTAATTGGCTCAACTCT
TGCGGTGACAATTTCCAGTGTCTCAACAGGCTTCATCATCACTTGGACTA
AACGGCTTAAGCCAACCATCATCTTTGGTGACATCTTTCTACTGCTGGGT
GGTTGCGCTGCCGCTTCCATGAGCGTTGGTACGCCTGATTGGCTTGCGAT
GGTTTGCGTTTCGCTCTCCAGTCTCGGACAAGGATGCTCTTTCCCCTCGC
TAATGGTGTCGGTTCTTGCCACTACTGATCAAGAGGACCAGGCTGTGGCC
ACGACGACCTTGGGTTTGTGGAGAAACCTCGGATCGGTGATGGGTGTCGC
AACGAGCAGTTGGATTTTCCAGAACACCCTCGTGTATCAACTTGAAGAGA
TGGTCACCGGACCCAACAAGGAGGGTGTTATCCTCCTTGTTCGCAAATCC
GTCCAAGCAATCGCGAAACTTGATTCAATGCATCAGCAACAAGGTAAGTC
TCGATTATATGTACCCGTGGAAGTTAATGACACTAAATCCTTGACTAGTA
ATCGGAGCGTATGCTGCTGCCCTTCGCGCTACTTTCTTCTCTGCTGCCAT
CTGGGGTGCTCTTATGCTCCTTCTGCACCTTCGAGTCCGAGTCCCCAAAT
TGGGAACCAAAGCATGAGAACATGAGCTGCTGATATGCTACAGTACATGG
TATTGACCGAACGAATGTAGACGGCGATAACAGATACCTCTTTTGCAGCT
GTCATTTTGAACAGCATGTTGCTGAAGACCTCATTTATTTACGACCAAAT
GCCCAAAAGTTATGGATAAAGGTAATGCTGGACCAAAAAACATTGCGAGC
GCTATTATAAAGAGACTTGATTAGTTTGCAAAG back to topCoding sequence (CDS) from alignment at ch7:2062211..2064893- >KJC3_010007-T1 ID=KJC3_010007-T1|Name=KJC3_010007-T1|organism=Aspergillus niger KJC3|type=CDS|length=3726bp|location=Sequence derived from alignment at ch7:2062211..2064893- (Aspergillus niger KJC3)
TAATCGGAGCGTATGCTGCTGCCCTTCGCGCTACTTTCTTCTCTGCTGCC
ATCTGGGGTGCTCTTATGCTCCTTCTGCACCTTCGAGTCCGAGTCCCCAA
ATTGGGAACCAAAGCATGAATGACTTCTCCCCATACAACAGATGGAAAGC
CACCATCATTTCTCCCTGCTACTGAGTCTACGCCATTGCTGCATGAGTCA
TCTCGTCAATCATTATATACAAGTCAAGACGATACGACTGTAGATAAGGA
TGTCGATCCAAGCCTGTCCTCAACCATCTTCGCCCCCGAAGAGGACCCTG
CGATACTTAGTCTCTCTAGAGTCACCTCAATCCCCCAGGGGCTCGAAATT
GAACCTAACCTCGAGAGACTCCCTTCTGCCCCCGTGAGCCAGAAACAAGT
GCCCGGGGATGCCGAAGATGGAGTTGCCGGTGAGCCTACTGGCTATGCTT
CACGTTTCATCAATGTCTCACCGATGAGATTCTGGCTTATCTTCTCTGGT
ATCTTGATGGGATACGTGATCGGATTTTTTGACTCCACGTTGATGGCTTC
GAGTCACCCTGTTATAACCTCCTACTTCCACGCCTCGAACTCCGCATCTT
GGCTGTCGACGGCATTCCTATTGACGTCTACCGCTTTCCTCCCGCTGTTC
GGACGCATTTCTGACACATTTGGAAGGAAGCCAGTGTATCTTTTCGCCAT
TGCCATCTTTTTCGTCACTACGGCATGGTGTGCAGCCGCCCAGAGTATGT
TCAGCTTCATCGCTGCTCGAGCATTTTGCGGACTCGGAGCCGGTGGCGTA
TTCTCCATGGGTATGATTCTCTCCAGTGATTTAGTACGCCTCGAATACCG
AGGCGTCTACCAGTCCTACATCAATCTCTGTCTGGGTATTGGTGGCTGCC
TTGGTTTGGCGTTTGGCGGGTTCCTGTGCGACCAAGTGGGGTGGAGAGGT
GCGTTCCTCGTGCAATTGCCCTTCATCTTTGTTTACTTCATCGTGGCAGC
TTGGACAACCCCTGCCGACTTGGGCCTGAAGAGGGCGAAAACAGAGAGGA
AGAGTTTGACGCAGCTCCTCAAGAGCATTGATCTTGTGGGCTCACTCATA
CTTGTCGTCGGTGTGACTTCACTGATTATGGGACTAAACCTGGGTGGTAA
TGTGTTGAGCTGGTCTCACCCCATTGTTATCACGTCCTTGATCTCATCTC
TCATCTTAGCTGTTGTTTTTGTTCGCTATGAGCGGACCGTGGAGCGGGGA
GTGATGCCAATCTCGTTATTGGTACAGGAGCCTCGCGCCAGCCTCATCTT
TGGAAACTTCTTCGGCGCCATCTCCGTTAACACCATGGTCTTCAATGCGC
CTCTGTATTTTCAGGCAGTCAAACTAGCTACCCCGACTGACTCAGGTCTC
AGGCTAATTGGCTCAACTCTTGCGGTGACAATTTCCAGTGTCTCAACAGG
CTTCATCATCACTTGGACTAAACGGCTTAAGCCAACCATCATCTTTGGTG
ACATCTTTCTACTGCTGGGTGGTTGCGCTGCCGCTTCCATGAGCGTTGGT
ACGCCTGATTGGCTTGCGATGGTTTGCGTTTCGCTCTCCAGTCTCGGACA
AGGATGCTCTTTCCCCTCGCTAATGGTGTCGGTTCTTGCCACTACTGATC
AAGAGGACCAGGCTGTGGCCACGACGACCTTGGGTTTGTGGAGAAACCTC
GGATCGGTGATGGGTGTCGCAACGAGCAGTTGGATTTTCCAGAACACCCT
CGTGTATCAACTTGAAGAGATGGTCACCGGACCCAACAAGGAGGGTGTTA
TCCTCCTTGTTCGCAAATCCGTCCAAGCAATCGCGAAACTTGATTCAATG
CATCAGCAACAAGTAATCGGAGCGTATGCTGCTGCCCTTCGCGCTACTTT
CTTCTCTGCTGCCATCTGGGGTGCTCTTATGCTCCTTCTGCACCTTCGAG
TCCGAGTCCCCAAATTGGGAACCAAAGCATGAATGACTTCTCCCCATACA
ACAGATGGAAAGCCACCATCATTTCTCCCTGCTACTGAGTCTACGCCATT
GCTGCATGAGTCATCTCGTCAATCATTATATACAAGTCAAGACGATACGA
CTGTAGATAAGGATGTCGATCCAAGCCTGTCCTCAACCATCTTCGCCCCC
GAAGAGGACCCTGCGATACTTAGTCTCTCTAGAGTCACCTCAATCCCCCA
GGGGCTCGAAATTGAACCTAACCTCGAGAGACTCCCTTCTGCCCCCGTGA
GCCAGAAACAAGTGCCCGGGGATGCCGAAGATGGAGTTGCCGGTGAGCCT
ACTGGCTATGCTTCACGTTTCATCAATGTCTCACCGATGAGATTCTGGCT
TATCTTCTCTGGTATCTTGATGGGATACGTGATCGGATTTTTTGACTCCA
CGTTGATGGCTTCGAGTCACCCTGTTATAACCTCCTACTTCCACGCCTCG
AACTCCGCATCTTGGCTGTCGACGGCATTCCTATTGACGTCTACCGCTTT
CCTCCCGCTGTTCGGACGCATTTCTGACACATTTGGAAGGAAGCCAGTGT
ATCTTTTCGCCATTGCCATCTTTTTCGTCACTACGGCATGGTGTGCAGCC
GCCCAGAGTATGTTCAGCTTCATCGCTGCTCGAGCATTTTGCGGACTCGG
AGCCGGTGGCGTATTCTCCATGGGTATGATTCTCTCCAGTGATTTAGTAC
GCCTCGAATACCGAGGCGTCTACCAGTCCTACATCAATCTCTGTCTGGGT
ATTGGTGGCTGCCTTGGTTTGGCGTTTGGCGGGTTCCTGTGCGACCAAGT
GGGGTGGAGAGGTGCGTTCCTCGTGCAATTGCCCTTCATCTTTGTTTACT
TCATCGTGGCAGCTTGGACAACCCCTGCCGACTTGGGCCTGAAGAGGGCG
AAAACAGAGAGGAAGAGTTTGACGCAGCTCCTCAAGAGCATTGATCTTGT
GGGCTCACTCATACTTGTCGTCGGTGTGACTTCACTGATTATGGGACTAA
ACCTGGGTGGTAATGTGTTGAGCTGGTCTCACCCCATTGTTATCACGTCC
TTGATCTCATCTCTCATCTTAGCTGTTGTTTTTGTTCGCTATGAGCGGAC
CGTGGAGCGGGGAGTGATGCCAATCTCGTTATTGGTACAGGAGCCTCGCG
CCAGCCTCATCTTTGGAAACTTCTTCGGCGCCATCTCCGTTAACACCATG
GTCTTCAATGCGCCTCTGTATTTTCAGGCAGTCAAACTAGCTACCCCGAC
TGACTCAGGTCTCAGGCTAATTGGCTCAACTCTTGCGGTGACAATTTCCA
GTGTCTCAACAGGCTTCATCATCACTTGGACTAAACGGCTTAAGCCAACC
ATCATCTTTGGTGACATCTTTCTACTGCTGGGTGGTTGCGCTGCCGCTTC
CATGAGCGTTGGTACGCCTGATTGGCTTGCGATGGTTTGCGTTTCGCTCT
CCAGTCTCGGACAAGGATGCTCTTTCCCCTCGCTAATGGTGTCGGTTCTT
GCCACTACTGATCAAGAGGACCAGGCTGTGGCCACGACGACCTTGGGTTT
GTGGAGAAACCTCGGATCGGTGATGGGTGTCGCAACGAGCAGTTGGATTT
TCCAGAACACCCTCGTGTATCAACTTGAAGAGATGGTCACCGGACCCAAC
AAGGAGGGTGTTATCCTCCTTGTTCGCAAATCCGTCCAAGCAATCGCGAA
ACTTGATTCAATGCATCAGCAACAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010007-T1.utr3p1 | KJC3_010007-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2062211..2064893 - |
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