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KJC3_010018-T1, KJC3_010018-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010018-T1
Unique NameKJC3_010018-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2086024..2086484-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010018-T1 ID=KJC3_010018-T1|Name=KJC3_010018-T1|organism=Aspergillus niger KJC3|type=mRNA|length=461bp|location=Sequence derived from alignment at ch7:2086024..2086484- (Aspergillus niger KJC3)
ATGGCCTTGAAGAGATATGATCAACTACACTCTGACCCTTGGTTGGATGT
CACGATCTACTCCGACTCGGCATTTGCAGTTGACTGTATGGAAGAGTGGG
TCTACAAGTGGATCAGGAACGGATGGATGAATTGTAAAGGGAACGAGGTA
GCAAATCGAGATCTCATTGAAGAAGCAGTGGTTCTCAGTGACCGGCTGAA
GGAGAAGGGAGATGTGCGTTATGTATGGATTCCAAGAGAGGAGAATCAGT
ATGTTGATAAGCTGTGCAATGATTTGATGAACACTATGTGTTTAGTTGAT
AGGCTGTGCAATGACCTGAAGAACGCTAGGTGTGACGAGCAAAGCTCCTC
TTCTGATGACAGCTACTAGACAGTTGGAGGGATTCTGTGTCTAGGAATCA
AACCGACAACCACTTTTCATTGATGTTGGAGCGAATCGAATCTATATTGG
CTGATCGTGGA
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Coding sequence (CDS) from alignment at ch7:2086024..2086484-

>KJC3_010018-T1 ID=KJC3_010018-T1|Name=KJC3_010018-T1|organism=Aspergillus niger KJC3|type=CDS|length=576bp|location=Sequence derived from alignment at ch7:2086024..2086484- (Aspergillus niger KJC3)
GTGTGACGAGCAAAGCTCCTCTTCTGATGACAGCTACTAGATGGCCTTGA
AGAGATATGATCAACTACACTCTGACCCTTGGTTGGATGTCACGATCTAC
TCCGACTCGGCATTTGCAGTTGACTGTATGGAAGAGTGGGTCTACAAGTG
GATCAGGAACGGATGGATGAATTGTAAAGGGAACGAGGTAGCAAATCGAG
ATCTCATTGAAGAAGCAGTGGTTCTCAGTGACCGGCTGAAGGAGAAGGGA
GATGTGCGTTATGTATGGATTCCAAGAGAGGAGAATCAGTGTGACGAGCA
AAGCTCCTCTTCTGATGACAGCTACTAGATGGCCTTGAAGAGATATGATC
AACTACACTCTGACCCTTGGTTGGATGTCACGATCTACTCCGACTCGGCA
TTTGCAGTTGACTGTATGGAAGAGTGGGTCTACAAGTGGATCAGGAACGG
ATGGATGAATTGTAAAGGGAACGAGGTAGCAAATCGAGATCTCATTGAAG
AAGCAGTGGTTCTCAGTGACCGGCTGAAGGAGAAGGGAGATGTGCGTTAT
GTATGGATTCCAAGAGAGGAGAATCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004523RNA-DNA hybrid ribonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010018KJC3_010018Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010018-T1KJC3_010018-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010018-T1.cdsKJC3_010018-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010018-T1.utr3p1KJC3_010018-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010018-T1.exon2KJC3_010018-T1.exon2Aspergillus niger KJC3exon
KJC3_010018-T1.exon1KJC3_010018-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR002156
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2086024..2086484 -
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