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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2118877..2122422- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010027-T1 ID=KJC3_010027-T1|Name=KJC3_010027-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3546bp|location=Sequence derived from alignment at ch7:2118877..2122422- (Aspergillus niger KJC3)
CAAAAAAAGTTCAGAGGCATCCCAAAAAAGAAAAAAAGCGAGTGCTTCAA
AAATAGTTGAGTGAAAAAAACAGACCGAGAGGCGTGTTGGTAAGTAATCT
GGTACTTTCTATTTGCCCGTCTCATGACAGAACCGTCCGAAAAAGGTCTG
GCCCGTGGTTATCAGCATACGGTGGTCACCCTCACCTTCATCATCATCAT
CATCACCACCACCATCCATTTCCATACTTACCCACTTCCTGCCTCTATTA
TCAATCTCTTCCTCGGCTCTCTCGCCTTCTTGCTCATTCACCACTTCCTC
CACCAACCGCTCAGCCCCCCCTAAATCCCTTCCTTTCCTTTCCCTTCATC
CCCCTTTCATCATCTTCTACTCTTTCAACACCCCTCATCATATCTGATCC
GACATTCCATCCGTCTTGTTTGATCGCCCTGTTACCGCCGATCTTTCTTG
TCCTGTCGCCGCTGTCCTCCCCTCCCACCAACAACGATCGATCTATCCAT
CCCATCTCTCCAGACCGTTCTCTCTCTCTTTCTCTCTCGAGCCTCCTCCA
TTCCGTACCTTTTTTTGCCTCCTACCCACCTCCACCCCCCCCAAATCTAT
TCGCGATCTGTCCTCCTTTAATTTCACCTCTTGTTCTTTTTTTAAACCTT
TCCTCACCTGTTCATCCGCACCCAGTACTCCGGGGCACTCTATCCGTTAC
GACTGGATCGCCACTCAGACCATCCCGTTCTGGATTGGCCAATATACGAG
CATTTCGTGGCAGATCTGTTGCCCATCAATACAGTTTGACTGCTGCTTAC
TGATCTCTGCCTTTTGACTTTACGATCGCTCAACTTTTCCGAGAACCCCT
ATCTCCTTCTAGTACGCTTGGGTCACCGTCAGGGATCAGTGTTCTGTCGT
CTCTCCGATTCCGCCTGGTTGGCTCTGGGAGTTTCACTAGCTGCAGTTAC
CTGCCTCTCAGTCAGGCTGTCGTTAGACTTTTCTTTTCTTTTTTCTCCTT
CCCCCTGCACTGTCATCTTGACCGACTTTTGACTTTGTGATACGATACAT
TACTTGCCCCCCCTCGACTGTGGTGCGACGTACCTTCACGATAAAGCCCT
CTCCTTATTTCGACTACGCTTTTATCTTGAGTGACTCGCTCTACTCTCGG
AAGTTGCCTTGATCTGGGGACTTTGTCACTGGGAGATAGAGAAGGAAAAC
GAATATCTTCTGCGGGCGATTTCTTGTTGGCAATGCTGGCATCAATCCCC
CAGATGGAGACGGTGCGATCGCTCCCTCGAAATCCCGATATGGTTGCGCG
GCATCCATCAGCGGAGGACTTGGACGCTGCTCAGCAGCTGATCTCGTCTG
CTCAGGCTGGTCGAGAACACCTTGTTGACCGTGCCCGTGATGATGATGCG
GCTCGAGGCTACGATGCTTACGATGCCTACGATGGCAAACATACACCTAC
TCCTTACGATTCTGAACGGCCTACGCTGCCGTCGACCGAATCTGCCTCGA
ACACACTAGCAGAAAGGACATCACCCAAGTCCCAGAAGGACACTTCCTTT
CTAGGACATTCCTGCAGGTGAGTTTCCATGGGCTTCTTTAGTTTGTTACC
TGGGCGGTACTGACTTCCTTGGTAACACTTAGTAACTGTGGAACGAAAAG
CACTCCGCTATGGCGACGATCACCGACCGGGGCGATGATTTGCAATGCCT
GTGGTCTGTATTTGAAGGCACGGAATGTTGCCCGGCCCACAAAGCGGAAT
CGTATACAGACCAGCACGGAACCTGTCCAACCCCAACCGTCGCAGCAACA
GCCACCATCGATAGCACCCCAGCACGAGGCACACACCCATAGCGAAGGAG
GCTGTCATGGCTCCAAAGGATCTTGCCCCGGTGGGGGCAACTGTAACGGC
ACTGGGGGTGCTGAGGGGTGTGACGGTTGCCCAGCTTACAACAACCGCGT
GTACAAGTCCTCTGCCCGAGGGACTGTGCCGGTGCACGCTTGGGGTCGAC
CCGCCAATCCAGATAGCGAAAAGCCCCTGCCAGCACAGGAACCGGACGTA
CCCGGAAAAAGTGGTGCGTCGGCCGAGGGAAACATATTGGTATCGTGTCA
GAATTGTGGAACTACTGTGACCCCGCTTTGGCGACGAGACGAGAATGGCC
ATCCGATCTGCAATGCGTGTGGTATGTTCTTTTGCCTTATCTCGGGTATC
AGAACGAGCCTTGAAGCGGCTAACATTTCACTTAGGTCTATATTACAAGC
TCCACGGCTGCTATCGCCCCACCACAATGAAGAAGACTATAATCAAGCGG
CGAAAACGCGTTGTGCCGGCGCTGCGGGAACACTCTCCGACTGCTGCCAC
GCAGTCGTCGAATGGCTCTTCTGCCTCGCCCGAGGCCTCCCCAGCGACGT
TGGCTCGCGTCCACGACGATCACTACCGCTACTACAGCTCTGAGCCGGTG
GATCACTATGGACCGATGTCCGGAGACAGGATTTCACCGGCCGCGCCCAA
GCAATTTGGCTTTGCACCCCCGCCTGTCGATTTTACCGGGTTTAGTTCCG
GGCCCGTCTCCTTACCGCACCATCCCCCGCCACCAAGATTGTTAGAGCCG
GATCGCATCAACGCTCCAAGCCACTCTCCGGTGTCTCAGTTTGGTCGGCG
ATCTCTTTCGCCGAATCCATCGGGTAATCCAAAGAAACGCACCCTTGCAG
AAACCGCGTCATCAGCAGAAGCGATGTCTATCCCAACCACTCTGGAGAAC
GGGTCCAACCAACTTCCTCCGATCATGTCTTCCGTCAATCCTTCCCCTCC
TGCCCGCCTCAGTTCAATTTCTTCTCTCCTCAACCCTAACAGCCATGACG
AATCGCGTCTAGACCCCTCACTCGCTGCCCTTAGCCGTCAGCACCATCAG
TCTCACCAAGCTCCTCCTCTTGCTCCCCCTCCCTCACAGTTGCTGCCTGG
TGTATCGGAATTCGACAACATCAGGGAAGAGCGTCGCTTAAAGTTGCAAC
GAGAAGCGGAAGAGATGAGAGAGATGCTGCGAGCAAAGGAGCGCGAATTG
GCAGAATTAGGACAACAATGATCATGGATCTAGTTGTCCTAGAACTGTTT
ATGCTGCTATTGCTATACCTTTACTCTTTCAACAATCACATATTTGGCGC
AGACTTTTTCTGACGAGATACCATTTGCAACACGATGAGTTTCACGGGAC
TTGTGCACTATTAAGGGAAAAAAAAGTTCTCTACATAGTTTTCTTTTTTT
TACTTGGGTTTAATTTGTTCGAAGCGCTGGCGGGATAAGCGATTACAAAA
GAAAGACTACGGAGGCTTGTTTTGTTACACTTTTATTTCCTCTTCTTCTT
CTTCTTCTCTCTCTCACTCTCCCCTTCACCTTGTTTGAATCTGTACCGGC
GGACGGATGCGTGGACAAGGCTATTAATTACGGGATAACCGGGGGTGAGA
TGACTGTGTTCGTAAGGTCATGGAATAACTGAATAGATTTCGGTAATAAG
GGACTTATCAAGATCATATGATGACTGTTATTGATCTAAAGTAAAC back to topCoding sequence (CDS) from alignment at ch7:2118877..2122422- >KJC3_010027-T1 ID=KJC3_010027-T1|Name=KJC3_010027-T1|organism=Aspergillus niger KJC3|type=CDS|length=5130bp|location=Sequence derived from alignment at ch7:2118877..2122422- (Aspergillus niger KJC3)
GTCTATATTACAAGCTCCACGGCTGCTATCGCCCCACCACAATGAAGAAG
ACTATAATCAAGCGGCGAAAACGCGTTGTGCCGGCGCTGCGGGAACACTC
TCCGACTGCTGCCACGCAGTCGTCGAATGGCTCTTCTGCCTCGCCCGAGG
CCTCCCCAGCGACGTTGGCTCGCGTCCACGACGATCACTACCGCTACTAC
AGCTCTGAGCCGGTGGATCACTATGGACCGATGTCCGGAGACAGGATTTC
ACCGGCCGCGCCCAAGCAATTTGGCTTTGCACCCCCGCCTGTCGATTTTA
CCGGGTTTAGTTCCGGGCCCGTCTCCTTACCGCACCATCCCCCGCCACCA
AGATTGTTAGAGCCGGATCGCATCAACGCTCCAAGCCACTCTCCGGTGTC
TCAGTTTGGTCGGCGATCTCTTTCGCCGAATCCATCGGGTAATCCAAAGA
AACGCACCCTTGCAGAAACCGCGTCATCAGCAGAAGCGATGTCTATCCCA
ACCACTCTGGAGAACGGGTCCAACCAACTTCCTCCGATCATGTCTTCCGT
CAATCCTTCCCCTCCTGCCCGCCTCAGTTCAATTTCTTCTCTCCTCAACC
CTAACAGCCATGACGAATCGCGTCTAGACCCCTCACTCGCTGCCCTTAGC
CGTCAGCACCATCAGTCTCACCAAGCTCCTCCTCTTGCTCCCCCTCCCTC
ACAGTTGCTGCCTGGTGTATCGGAATTCGACAACATCAGGGAAGAGCGTC
GCTTAAAGTTGCAACGAGAAGCGGAAGAGATGAGAGAGATGCTGCGAGCA
AAGGAGCGCGAATTGGCAGAATTAGGACAACAATGATAACTGTGGAACGA
AAAGCACTCCGCTATGGCGACGATCACCGACCGGGGCGATGATTTGCAAT
GCCTGTGGTCTGTATTTGAAGGCACGGAATGTTGCCCGGCCCACAAAGCG
GAATCGTATACAGACCAGCACGGAACCTGTCCAACCCCAACCGTCGCAGC
AACAGCCACCATCGATAGCACCCCAGCACGAGGCACACACCCATAGCGAA
GGAGGCTGTCATGGCTCCAAAGGATCTTGCCCCGGTGGGGGCAACTGTAA
CGGCACTGGGGGTGCTGAGGGGTGTGACGGTTGCCCAGCTTACAACAACC
GCGTGTACAAGTCCTCTGCCCGAGGGACTGTGCCGGTGCACGCTTGGGGT
CGACCCGCCAATCCAGATAGCGAAAAGCCCCTGCCAGCACAGGAACCGGA
CGTACCCGGAAAAAGTGGTGCGTCGGCCGAGGGAAACATATTGGTATCGT
GTCAGAATTGTGGAACTACTGTGACCCCGCTTTGGCGACGAGACGAGAAT
GGCCATCCGATCTGCAATGCGTGTGATGCTGGCATCAATCCCCCAGATGG
AGACGGTGCGATCGCTCCCTCGAAATCCCGATATGGTTGCGCGGCATCCA
TCAGCGGAGGACTTGGACGCTGCTCAGCAGCTGATCTCGTCTGCTCAGGC
TGGTCGAGAACACCTTGTTGACCGTGCCCGTGATGATGATGCGGCTCGAG
GCTACGATGCTTACGATGCCTACGATGGCAAACATACACCTACTCCTTAC
GATTCTGAACGGCCTACGCTGCCGTCGACCGAATCTGCCTCGAACACACT
AGCAGAAAGGACATCACCCAAGTCCCAGAAGGACACTTCCTTTCTAGGAC
ATTCCTGCAGGTCTATATTACAAGCTCCACGGCTGCTATCGCCCCACCAC
AATGAAGAAGACTATAATCAAGCGGCGAAAACGCGTTGTGCCGGCGCTGC
GGGAACACTCTCCGACTGCTGCCACGCAGTCGTCGAATGGCTCTTCTGCC
TCGCCCGAGGCCTCCCCAGCGACGTTGGCTCGCGTCCACGACGATCACTA
CCGCTACTACAGCTCTGAGCCGGTGGATCACTATGGACCGATGTCCGGAG
ACAGGATTTCACCGGCCGCGCCCAAGCAATTTGGCTTTGCACCCCCGCCT
GTCGATTTTACCGGGTTTAGTTCCGGGCCCGTCTCCTTACCGCACCATCC
CCCGCCACCAAGATTGTTAGAGCCGGATCGCATCAACGCTCCAAGCCACT
CTCCGGTGTCTCAGTTTGGTCGGCGATCTCTTTCGCCGAATCCATCGGGT
AATCCAAAGAAACGCACCCTTGCAGAAACCGCGTCATCAGCAGAAGCGAT
GTCTATCCCAACCACTCTGGAGAACGGGTCCAACCAACTTCCTCCGATCA
TGTCTTCCGTCAATCCTTCCCCTCCTGCCCGCCTCAGTTCAATTTCTTCT
CTCCTCAACCCTAACAGCCATGACGAATCGCGTCTAGACCCCTCACTCGC
TGCCCTTAGCCGTCAGCACCATCAGTCTCACCAAGCTCCTCCTCTTGCTC
CCCCTCCCTCACAGTTGCTGCCTGGTGTATCGGAATTCGACAACATCAGG
GAAGAGCGTCGCTTAAAGTTGCAACGAGAAGCGGAAGAGATGAGAGAGAT
GCTGCGAGCAAAGGAGCGCGAATTGGCAGAATTAGGACAACAATGATAAC
TGTGGAACGAAAAGCACTCCGCTATGGCGACGATCACCGACCGGGGCGAT
GATTTGCAATGCCTGTGGTCTGTATTTGAAGGCACGGAATGTTGCCCGGC
CCACAAAGCGGAATCGTATACAGACCAGCACGGAACCTGTCCAACCCCAA
CCGTCGCAGCAACAGCCACCATCGATAGCACCCCAGCACGAGGCACACAC
CCATAGCGAAGGAGGCTGTCATGGCTCCAAAGGATCTTGCCCCGGTGGGG
GCAACTGTAACGGCACTGGGGGTGCTGAGGGGTGTGACGGTTGCCCAGCT
TACAACAACCGCGTGTACAAGTCCTCTGCCCGAGGGACTGTGCCGGTGCA
CGCTTGGGGTCGACCCGCCAATCCAGATAGCGAAAAGCCCCTGCCAGCAC
AGGAACCGGACGTACCCGGAAAAAGTGGTGCGTCGGCCGAGGGAAACATA
TTGGTATCGTGTCAGAATTGTGGAACTACTGTGACCCCGCTTTGGCGACG
AGACGAGAATGGCCATCCGATCTGCAATGCGTGTGATGCTGGCATCAATC
CCCCAGATGGAGACGGTGCGATCGCTCCCTCGAAATCCCGATATGGTTGC
GCGGCATCCATCAGCGGAGGACTTGGACGCTGCTCAGCAGCTGATCTCGT
CTGCTCAGGCTGGTCGAGAACACCTTGTTGACCGTGCCCGTGATGATGAT
GCGGCTCGAGGCTACGATGCTTACGATGCCTACGATGGCAAACATACACC
TACTCCTTACGATTCTGAACGGCCTACGCTGCCGTCGACCGAATCTGCCT
CGAACACACTAGCAGAAAGGACATCACCCAAGTCCCAGAAGGACACTTCC
TTTCTAGGACATTCCTGCAGGTCTATATTACAAGCTCCACGGCTGCTATC
GCCCCACCACAATGAAGAAGACTATAATCAAGCGGCGAAAACGCGTTGTG
CCGGCGCTGCGGGAACACTCTCCGACTGCTGCCACGCAGTCGTCGAATGG
CTCTTCTGCCTCGCCCGAGGCCTCCCCAGCGACGTTGGCTCGCGTCCACG
ACGATCACTACCGCTACTACAGCTCTGAGCCGGTGGATCACTATGGACCG
ATGTCCGGAGACAGGATTTCACCGGCCGCGCCCAAGCAATTTGGCTTTGC
ACCCCCGCCTGTCGATTTTACCGGGTTTAGTTCCGGGCCCGTCTCCTTAC
CGCACCATCCCCCGCCACCAAGATTGTTAGAGCCGGATCGCATCAACGCT
CCAAGCCACTCTCCGGTGTCTCAGTTTGGTCGGCGATCTCTTTCGCCGAA
TCCATCGGGTAATCCAAAGAAACGCACCCTTGCAGAAACCGCGTCATCAG
CAGAAGCGATGTCTATCCCAACCACTCTGGAGAACGGGTCCAACCAACTT
CCTCCGATCATGTCTTCCGTCAATCCTTCCCCTCCTGCCCGCCTCAGTTC
AATTTCTTCTCTCCTCAACCCTAACAGCCATGACGAATCGCGTCTAGACC
CCTCACTCGCTGCCCTTAGCCGTCAGCACCATCAGTCTCACCAAGCTCCT
CCTCTTGCTCCCCCTCCCTCACAGTTGCTGCCTGGTGTATCGGAATTCGA
CAACATCAGGGAAGAGCGTCGCTTAAAGTTGCAACGAGAAGCGGAAGAGA
TGAGAGAGATGCTGCGAGCAAAGGAGCGCGAATTGGCAGAATTAGGACAA
CAATGATAACTGTGGAACGAAAAGCACTCCGCTATGGCGACGATCACCGA
CCGGGGCGATGATTTGCAATGCCTGTGGTCTGTATTTGAAGGCACGGAAT
GTTGCCCGGCCCACAAAGCGGAATCGTATACAGACCAGCACGGAACCTGT
CCAACCCCAACCGTCGCAGCAACAGCCACCATCGATAGCACCCCAGCACG
AGGCACACACCCATAGCGAAGGAGGCTGTCATGGCTCCAAAGGATCTTGC
CCCGGTGGGGGCAACTGTAACGGCACTGGGGGTGCTGAGGGGTGTGACGG
TTGCCCAGCTTACAACAACCGCGTGTACAAGTCCTCTGCCCGAGGGACTG
TGCCGGTGCACGCTTGGGGTCGACCCGCCAATCCAGATAGCGAAAAGCCC
CTGCCAGCACAGGAACCGGACGTACCCGGAAAAAGTGGTGCGTCGGCCGA
GGGAAACATATTGGTATCGTGTCAGAATTGTGGAACTACTGTGACCCCGC
TTTGGCGACGAGACGAGAATGGCCATCCGATCTGCAATGCGTGTGATGCT
GGCATCAATCCCCCAGATGGAGACGGTGCGATCGCTCCCTCGAAATCCCG
ATATGGTTGCGCGGCATCCATCAGCGGAGGACTTGGACGCTGCTCAGCAG
CTGATCTCGTCTGCTCAGGCTGGTCGAGAACACCTTGTTGACCGTGCCCG
TGATGATGATGCGGCTCGAGGCTACGATGCTTACGATGCCTACGATGGCA
AACATACACCTACTCCTTACGATTCTGAACGGCCTACGCTGCCGTCGACC
GAATCTGCCTCGAACACACTAGCAGAAAGGACATCACCCAAGTCCCAGAA
GGACACTTCCTTTCTAGGACATTCCTGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0043565 | sequence-specific DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010027-T1.utr3p1 | KJC3_010027-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010027-T1.utr5p1 | KJC3_010027-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013088 |
| DBxref | InterPro:IPR000679 |
| DBxref | PFAM:PF00320 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2118877..2122422 - |
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