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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2166136..2168816- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010039-T1 ID=KJC3_010039-T1|Name=KJC3_010039-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2681bp|location=Sequence derived from alignment at ch7:2166136..2168816- (Aspergillus niger KJC3)
TCTTCTTCATTCTCCTCTCCAATCGTTCTGTCCGTGGGTAGATCATGTCC
TGATCTGACCTTATGCTCTCTCCCTCAGATCTCTCGGATAAGAGATGACG
AATTAGCGAGTCTCCGGACCCTTGGATCTGTGTCGATGTTTCGGCGATGA
CCTCCGCAGCGCACAGCAGTCATTCACCCGCCGGGAATGGGGTGACTAAG
CGCAAGTCAGGTACGCTCTGCAATGTCTATGAAGGACTTGGCATATATCT
GCTATTCTTCTCCTGGTTCTAATGAAAATTCCCCTCTAGGCTCCGCAGCC
TGCGTCCACTGCCATCGGCGCAAAGTCCGATGCGATGCCCGCATCGTCGG
CCTCCCATGCTCCAATTGCCGTTCCGCGGGAAAGACCGACTGTCGGATTC
ACGAAAAGAAGAAGCGTCTGGCGGTGCGATCAATCCTCGACCCCGTTCCG
ATCCGCTGTCGACCACCTCCTGCTTCTTCTGAGCCTACACACAGACACTC
TCTGCCTCTCACGGCTACAACCCCACCTGACGCTTTCACCACCACCTTTC
GCGGCGTCCAACCGGAAGTGACAACACCTGTCGCACATCCCGCATCAAGT
CTTCATAATCTTCATCAAACGCTTAATCATAATGTTAATCACCACCCTCC
CCATAATGGCGCCGGGTCAGCTGCAGAATCTCCGACATATAACCGTCCCC
CGGGCCAGGATGTCTCGGCCGAATCGGACTCCCACGCGGATTTGGAGAAA
CGACTAGTGAAGCTCATCGATGAGGAAGAATCGGGCAGTCGGGAGATTCG
TCGGGGTGTGCGAGCTATATACGTGGGCCATGAGCTGTCGAACATGTCTT
TCTTGATCCGTCAGCAACGCGACAAGGATGACGACGTCTATCACTTTGCA
GGCAATGAGATTCCGCGACGACAGTTAAGGACCGGCCATGATCAGCTCCT
CATGGATGCTCTCACTTTGCCTGAACCGGCCCTAGCAGATGAACTGGTGC
AAGCTTACTTTGACCACGTCAACCCAGGGTATCCTATCATTGACGAGGAC
TTGTTCATGGCGCAGTATCGCAACCGGGACCCTGCTGATCCTCCCCCGAT
ATTGCTGCTACAAGCGATTCTGCTAGTGGGAGCCCATGTCACTCGTCCCA
AAGCGGAACGCGATGCCCTCAAGGATATTTTCTTCCGTCGTGCCAAGTGG
CTGTTTGATTCACGTATTGAGCGTAATCGCGATATCCTGGTGCAAGCTGC
TCTACTTTTGACTTGGCACTCGGATGGTGCCGACGATGATGTCGCAGCGA
ATGCGCACTACTGGGTGGGTGTAGCTGCCAGGATTGCTACTGGCCTCGGA
ATGCACCGAAATCCTATCTCTAGCCGGTTTGTCTCCCGTGATCGCCGGAT
GTGGAGGAGGCTATGGCACATTATAGTGCAATTCGACGTTATGGTATCAC
TTTCGTATGGTCGACCGCAGGCAATGTAAGCAGATAGCCCCCTCCTTACC
CTCCCGATCGGCCGCTGACTGCTTCCGACAACAGAAACCTAGAAGACTCC
GACGTGTCTCCATTGACAATCTCTGACTTCGAGGGCTGCGGACCTCGTGT
CCAATCCGACTACGTGATCCATTTCACTGAGCTCTCAGTAATGATCTCGT
ACATCGTTCGAAGCCGCTTCGGACTACGAGTGAGCGCAGAGCGTCGCAAA
GCCGTCCTCCTAGAAGCCGACGAAGCCCTCGCCAATTGGTCCCTGAAGCT
GCCCGATAAACTACGTCTCCGAGCGTCCGACATGGACCCCTGGTCCGCCA
TGCTCCATCTCACCTACAACAACTTCCTGATCCTCCTCCACCGCCCACAC
CCCCGAGCATCCGCCTACTCAGATGACTACGGCCCGCACGATGCCGAAAT
CTGCAGCGCAGCCGCAGGAGTCATCACCTCCATCTTCGAAGAACTCCGAT
TAAACGACCGCCTCAAGTTCCTCTGGTACTCCGGCGTCCACACCCTCTTC
ACAGCCATGATCCAAGTCCGCGTCGAACTCCGCTTCTCCAACCCCGTCCT
AGCAATCAACGCCCTCCGCCGCTTCGACTCAGCCTCCTACTCCCTCCGCG
AACTAGCAAGCTATTGGTTCCACGCAAACACCATCCTCCGCCTCTTCGAA
GACTCCAGACGCCTCCAAGAAGACCTCCGAATGGCCACCAGCGAACGACC
ACCCCGCCGCTTCAGCAACCCTCAAGACCAACTCAAAACAACCCTACACT
CCACCACCACTTCCACCTCCGCACCCACAGCAATGCAGACACCAAGACCC
CCCAACCCAACCCCGACAGACCGCCCTCTTCCCTTCGAAGTCCCCACCCC
AGACTCCTCCACGAACCACCTCCCAACAAGCCCTCACCACAGCCACCCTC
AACCTCAATCTCAGCCCCAACAACATCACCATCTAGACGCCTGGATCCCC
CCACCTCCGCCATCCGCCACCATGACCCCCGTCGTCGACGCCATCGACGC
CGACGCGCCCCGCGAATCTCTCGACTGGCGCCAACTCTTCTCCTTCACGG
ATCTGGACCAGCCCGTGCTGCCTATGGCCATGGAAGGGCTACCAGAGTTA
GAGGATGAATGGCGTCAGATCTACTGGCAAGAGACTCCGATGTCAGATCT
TCTGTTAGATGGGGGGTGGATGCATGGATAA back to topCoding sequence (CDS) from alignment at ch7:2166136..2168816- >KJC3_010039-T1 ID=KJC3_010039-T1|Name=KJC3_010039-T1|organism=Aspergillus niger KJC3|type=CDS|length=7191bp|location=Sequence derived from alignment at ch7:2166136..2168816- (Aspergillus niger KJC3)
AAACCTAGAAGACTCCGACGTGTCTCCATTGACAATCTCTGACTTCGAGG
GCTGCGGACCTCGTGTCCAATCCGACTACGTGATCCATTTCACTGAGCTC
TCAGTAATGATCTCGTACATCGTTCGAAGCCGCTTCGGACTACGAGTGAG
CGCAGAGCGTCGCAAAGCCGTCCTCCTAGAAGCCGACGAAGCCCTCGCCA
ATTGGTCCCTGAAGCTGCCCGATAAACTACGTCTCCGAGCGTCCGACATG
GACCCCTGGTCCGCCATGCTCCATCTCACCTACAACAACTTCCTGATCCT
CCTCCACCGCCCACACCCCCGAGCATCCGCCTACTCAGATGACTACGGCC
CGCACGATGCCGAAATCTGCAGCGCAGCCGCAGGAGTCATCACCTCCATC
TTCGAAGAACTCCGATTAAACGACCGCCTCAAGTTCCTCTGGTACTCCGG
CGTCCACACCCTCTTCACAGCCATGATCCAAGTCCGCGTCGAACTCCGCT
TCTCCAACCCCGTCCTAGCAATCAACGCCCTCCGCCGCTTCGACTCAGCC
TCCTACTCCCTCCGCGAACTAGCAAGCTATTGGTTCCACGCAAACACCAT
CCTCCGCCTCTTCGAAGACTCCAGACGCCTCCAAGAAGACCTCCGAATGG
CCACCAGCGAACGACCACCCCGCCGCTTCAGCAACCCTCAAGACCAACTC
AAAACAACCCTACACTCCACCACCACTTCCACCTCCGCACCCACAGCAAT
GCAGACACCAAGACCCCCCAACCCAACCCCGACAGACCGCCCTCTTCCCT
TCGAAGTCCCCACCCCAGACTCCTCCACGAACCACCTCCCAACAAGCCCT
CACCACAGCCACCCTCAACCTCAATCTCAGCCCCAACAACATCACCATCT
AGACGCCTGGATCCCCCCACCTCCGCCATCCGCCACCATGACCCCCGTCG
TCGACGCCATCGACGCCGACGCGCCCCGCGAATCTCTCGACTGGCGCCAA
CTCTTCTCCTTCACGGATCTGGACCAGCCCGTGCTGCCTATGGCCATGGA
AGGGCTACCAGAGTTAGAGGATGAATGGCGTCAGATCTACTGGCAAGAGA
CTCCGATGTCAGATCTTCTGTTAGATGGGGGGTGGATGCATGGATAAGCT
CCGCAGCCTGCGTCCACTGCCATCGGCGCAAAGTCCGATGCGATGCCCGC
ATCGTCGGCCTCCCATGCTCCAATTGCCGTTCCGCGGGAAAGACCGACTG
TCGGATTCACGAAAAGAAGAAGCGTCTGGCGGTGCGATCAATCCTCGACC
CCGTTCCGATCCGCTGTCGACCACCTCCTGCTTCTTCTGAGCCTACACAC
AGACACTCTCTGCCTCTCACGGCTACAACCCCACCTGACGCTTTCACCAC
CACCTTTCGCGGCGTCCAACCGGAAGTGACAACACCTGTCGCACATCCCG
CATCAAGTCTTCATAATCTTCATCAAACGCTTAATCATAATGTTAATCAC
CACCCTCCCCATAATGGCGCCGGGTCAGCTGCAGAATCTCCGACATATAA
CCGTCCCCCGGGCCAGGATGTCTCGGCCGAATCGGACTCCCACGCGGATT
TGGAGAAACGACTAGTGAAGCTCATCGATGAGGAAGAATCGGGCAGTCGG
GAGATTCGTCGGGGTGTGCGAGCTATATACGTGGGCCATGAGCTGTCGAA
CATGTCTTTCTTGATCCGTCAGCAACGCGACAAGGATGACGACGTCTATC
ACTTTGCAGGCAATGAGATTCCGCGACGACAGTTAAGGACCGGCCATGAT
CAGCTCCTCATGGATGCTCTCACTTTGCCTGAACCGGCCCTAGCAGATGA
ACTGGTGCAAGCTTACTTTGACCACGTCAACCCAGGGTATCCTATCATTG
ACGAGGACTTGTTCATGGCGCAGTATCGCAACCGGGACCCTGCTGATCCT
CCCCCGATATTGCTGCTACAAGCGATTCTGCTAGTGGGAGCCCATGTCAC
TCGTCCCAAAGCGGAACGCGATGCCCTCAAGGATATTTTCTTCCGTCGTG
CCAAGTGGCTGTTTGATTCACGTATTGAGCGTAATCGCGATATCCTGGTG
CAAGCTGCTCTACTTTTGACTTGGCACTCGGATGGTGCCGACGATGATGT
CGCAGCGAATGCGCACTACTGGGTGGGTGTAGCTGCCAGGATTGCTACTG
GCCTCGGAATGCACCGAAATCCTATCTCTAGCCGGTTTGTCTCCCGTGAT
CGCCGGATGTGGAGGAGGCTATGGCACATTATAGTGCAATTCGACGTTAT
GGTATCACTTTCGTATGGTCGACCGCAGGCAATATGACCTCCGCAGCGCA
CAGCAGTCATTCACCCGCCGGGAATGGGGTGACTAAGCGCAAGTCAGAAA
CCTAGAAGACTCCGACGTGTCTCCATTGACAATCTCTGACTTCGAGGGCT
GCGGACCTCGTGTCCAATCCGACTACGTGATCCATTTCACTGAGCTCTCA
GTAATGATCTCGTACATCGTTCGAAGCCGCTTCGGACTACGAGTGAGCGC
AGAGCGTCGCAAAGCCGTCCTCCTAGAAGCCGACGAAGCCCTCGCCAATT
GGTCCCTGAAGCTGCCCGATAAACTACGTCTCCGAGCGTCCGACATGGAC
CCCTGGTCCGCCATGCTCCATCTCACCTACAACAACTTCCTGATCCTCCT
CCACCGCCCACACCCCCGAGCATCCGCCTACTCAGATGACTACGGCCCGC
ACGATGCCGAAATCTGCAGCGCAGCCGCAGGAGTCATCACCTCCATCTTC
GAAGAACTCCGATTAAACGACCGCCTCAAGTTCCTCTGGTACTCCGGCGT
CCACACCCTCTTCACAGCCATGATCCAAGTCCGCGTCGAACTCCGCTTCT
CCAACCCCGTCCTAGCAATCAACGCCCTCCGCCGCTTCGACTCAGCCTCC
TACTCCCTCCGCGAACTAGCAAGCTATTGGTTCCACGCAAACACCATCCT
CCGCCTCTTCGAAGACTCCAGACGCCTCCAAGAAGACCTCCGAATGGCCA
CCAGCGAACGACCACCCCGCCGCTTCAGCAACCCTCAAGACCAACTCAAA
ACAACCCTACACTCCACCACCACTTCCACCTCCGCACCCACAGCAATGCA
GACACCAAGACCCCCCAACCCAACCCCGACAGACCGCCCTCTTCCCTTCG
AAGTCCCCACCCCAGACTCCTCCACGAACCACCTCCCAACAAGCCCTCAC
CACAGCCACCCTCAACCTCAATCTCAGCCCCAACAACATCACCATCTAGA
CGCCTGGATCCCCCCACCTCCGCCATCCGCCACCATGACCCCCGTCGTCG
ACGCCATCGACGCCGACGCGCCCCGCGAATCTCTCGACTGGCGCCAACTC
TTCTCCTTCACGGATCTGGACCAGCCCGTGCTGCCTATGGCCATGGAAGG
GCTACCAGAGTTAGAGGATGAATGGCGTCAGATCTACTGGCAAGAGACTC
CGATGTCAGATCTTCTGTTAGATGGGGGGTGGATGCATGGATAAGCTCCG
CAGCCTGCGTCCACTGCCATCGGCGCAAAGTCCGATGCGATGCCCGCATC
GTCGGCCTCCCATGCTCCAATTGCCGTTCCGCGGGAAAGACCGACTGTCG
GATTCACGAAAAGAAGAAGCGTCTGGCGGTGCGATCAATCCTCGACCCCG
TTCCGATCCGCTGTCGACCACCTCCTGCTTCTTCTGAGCCTACACACAGA
CACTCTCTGCCTCTCACGGCTACAACCCCACCTGACGCTTTCACCACCAC
CTTTCGCGGCGTCCAACCGGAAGTGACAACACCTGTCGCACATCCCGCAT
CAAGTCTTCATAATCTTCATCAAACGCTTAATCATAATGTTAATCACCAC
CCTCCCCATAATGGCGCCGGGTCAGCTGCAGAATCTCCGACATATAACCG
TCCCCCGGGCCAGGATGTCTCGGCCGAATCGGACTCCCACGCGGATTTGG
AGAAACGACTAGTGAAGCTCATCGATGAGGAAGAATCGGGCAGTCGGGAG
ATTCGTCGGGGTGTGCGAGCTATATACGTGGGCCATGAGCTGTCGAACAT
GTCTTTCTTGATCCGTCAGCAACGCGACAAGGATGACGACGTCTATCACT
TTGCAGGCAATGAGATTCCGCGACGACAGTTAAGGACCGGCCATGATCAG
CTCCTCATGGATGCTCTCACTTTGCCTGAACCGGCCCTAGCAGATGAACT
GGTGCAAGCTTACTTTGACCACGTCAACCCAGGGTATCCTATCATTGACG
AGGACTTGTTCATGGCGCAGTATCGCAACCGGGACCCTGCTGATCCTCCC
CCGATATTGCTGCTACAAGCGATTCTGCTAGTGGGAGCCCATGTCACTCG
TCCCAAAGCGGAACGCGATGCCCTCAAGGATATTTTCTTCCGTCGTGCCA
AGTGGCTGTTTGATTCACGTATTGAGCGTAATCGCGATATCCTGGTGCAA
GCTGCTCTACTTTTGACTTGGCACTCGGATGGTGCCGACGATGATGTCGC
AGCGAATGCGCACTACTGGGTGGGTGTAGCTGCCAGGATTGCTACTGGCC
TCGGAATGCACCGAAATCCTATCTCTAGCCGGTTTGTCTCCCGTGATCGC
CGGATGTGGAGGAGGCTATGGCACATTATAGTGCAATTCGACGTTATGGT
ATCACTTTCGTATGGTCGACCGCAGGCAATATGACCTCCGCAGCGCACAG
CAGTCATTCACCCGCCGGGAATGGGGTGACTAAGCGCAAGTCAGAAACCT
AGAAGACTCCGACGTGTCTCCATTGACAATCTCTGACTTCGAGGGCTGCG
GACCTCGTGTCCAATCCGACTACGTGATCCATTTCACTGAGCTCTCAGTA
ATGATCTCGTACATCGTTCGAAGCCGCTTCGGACTACGAGTGAGCGCAGA
GCGTCGCAAAGCCGTCCTCCTAGAAGCCGACGAAGCCCTCGCCAATTGGT
CCCTGAAGCTGCCCGATAAACTACGTCTCCGAGCGTCCGACATGGACCCC
TGGTCCGCCATGCTCCATCTCACCTACAACAACTTCCTGATCCTCCTCCA
CCGCCCACACCCCCGAGCATCCGCCTACTCAGATGACTACGGCCCGCACG
ATGCCGAAATCTGCAGCGCAGCCGCAGGAGTCATCACCTCCATCTTCGAA
GAACTCCGATTAAACGACCGCCTCAAGTTCCTCTGGTACTCCGGCGTCCA
CACCCTCTTCACAGCCATGATCCAAGTCCGCGTCGAACTCCGCTTCTCCA
ACCCCGTCCTAGCAATCAACGCCCTCCGCCGCTTCGACTCAGCCTCCTAC
TCCCTCCGCGAACTAGCAAGCTATTGGTTCCACGCAAACACCATCCTCCG
CCTCTTCGAAGACTCCAGACGCCTCCAAGAAGACCTCCGAATGGCCACCA
GCGAACGACCACCCCGCCGCTTCAGCAACCCTCAAGACCAACTCAAAACA
ACCCTACACTCCACCACCACTTCCACCTCCGCACCCACAGCAATGCAGAC
ACCAAGACCCCCCAACCCAACCCCGACAGACCGCCCTCTTCCCTTCGAAG
TCCCCACCCCAGACTCCTCCACGAACCACCTCCCAACAAGCCCTCACCAC
AGCCACCCTCAACCTCAATCTCAGCCCCAACAACATCACCATCTAGACGC
CTGGATCCCCCCACCTCCGCCATCCGCCACCATGACCCCCGTCGTCGACG
CCATCGACGCCGACGCGCCCCGCGAATCTCTCGACTGGCGCCAACTCTTC
TCCTTCACGGATCTGGACCAGCCCGTGCTGCCTATGGCCATGGAAGGGCT
ACCAGAGTTAGAGGATGAATGGCGTCAGATCTACTGGCAAGAGACTCCGA
TGTCAGATCTTCTGTTAGATGGGGGGTGGATGCATGGATAAGCTCCGCAG
CCTGCGTCCACTGCCATCGGCGCAAAGTCCGATGCGATGCCCGCATCGTC
GGCCTCCCATGCTCCAATTGCCGTTCCGCGGGAAAGACCGACTGTCGGAT
TCACGAAAAGAAGAAGCGTCTGGCGGTGCGATCAATCCTCGACCCCGTTC
CGATCCGCTGTCGACCACCTCCTGCTTCTTCTGAGCCTACACACAGACAC
TCTCTGCCTCTCACGGCTACAACCCCACCTGACGCTTTCACCACCACCTT
TCGCGGCGTCCAACCGGAAGTGACAACACCTGTCGCACATCCCGCATCAA
GTCTTCATAATCTTCATCAAACGCTTAATCATAATGTTAATCACCACCCT
CCCCATAATGGCGCCGGGTCAGCTGCAGAATCTCCGACATATAACCGTCC
CCCGGGCCAGGATGTCTCGGCCGAATCGGACTCCCACGCGGATTTGGAGA
AACGACTAGTGAAGCTCATCGATGAGGAAGAATCGGGCAGTCGGGAGATT
CGTCGGGGTGTGCGAGCTATATACGTGGGCCATGAGCTGTCGAACATGTC
TTTCTTGATCCGTCAGCAACGCGACAAGGATGACGACGTCTATCACTTTG
CAGGCAATGAGATTCCGCGACGACAGTTAAGGACCGGCCATGATCAGCTC
CTCATGGATGCTCTCACTTTGCCTGAACCGGCCCTAGCAGATGAACTGGT
GCAAGCTTACTTTGACCACGTCAACCCAGGGTATCCTATCATTGACGAGG
ACTTGTTCATGGCGCAGTATCGCAACCGGGACCCTGCTGATCCTCCCCCG
ATATTGCTGCTACAAGCGATTCTGCTAGTGGGAGCCCATGTCACTCGTCC
CAAAGCGGAACGCGATGCCCTCAAGGATATTTTCTTCCGTCGTGCCAAGT
GGCTGTTTGATTCACGTATTGAGCGTAATCGCGATATCCTGGTGCAAGCT
GCTCTACTTTTGACTTGGCACTCGGATGGTGCCGACGATGATGTCGCAGC
GAATGCGCACTACTGGGTGGGTGTAGCTGCCAGGATTGCTACTGGCCTCG
GAATGCACCGAAATCCTATCTCTAGCCGGTTTGTCTCCCGTGATCGCCGG
ATGTGGAGGAGGCTATGGCACATTATAGTGCAATTCGACGTTATGGTATC
ACTTTCGTATGGTCGACCGCAGGCAATATGACCTCCGCAGCGCACAGCAG
TCATTCACCCGCCGGGAATGGGGTGACTAAGCGCAAGTCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010039-T1.utr5p1 | KJC3_010039-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2166136..2168816 - |
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