You are here

Home

KJC3_010053-T1, KJC3_010053-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010053-T1
Unique NameKJC3_010053-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2199515..2201504+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010053-T1 ID=KJC3_010053-T1|Name=KJC3_010053-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1990bp|location=Sequence derived from alignment at ch7:2199515..2201504+ (Aspergillus niger KJC3)
ATGGAGATCACCGACTTCATTTTCTCCCAGAGGGAGGAGAGTCTCTTGAC
GGGAAACTACAACGCTTATCGAGCACACACGACTCGCAAGTTGCACAGCG
CCCGCCTGCGACTTGGACAGACCACCCCCAAACGCAGCAAGTACATTGCC
AAACGACCTGTGACGGCGGAAGATGTGAACAGCAATGTGGAGTATGTCTC
TGAAGTCATCTTTGACGTATTCCTTCAAACACTCATACGGCTGGGTCAGC
TATGGAAATTGTACTAACACTCCGGATTTCTTAGATACGTCCACACCCTA
CTCATCAGCGCCGAACGGGCATGGGCGAACGCAATGCACATGAAGACCAC
TCACTCGGCAGACCCATCGGCCAAGGGGGTTAGCGGTACGACTAGGGGGC
ACATTATTTCGAAACTACGGAAGGCAGTTACATTTGCGAAGCAATTGGTG
CACGTTCTCGAGGATCAAGAAACTTCTGGTGCTGCAGACACTGATGTCCT
CGAAGCTCGTGCATATCTGGCGTCCCTCTTGGGAGCATACTTCTTGGAGA
AGCGCAATTGGGAGCAGTGTCTCCAAAACTACTCCGTGTCAAGAGTGATC
TATGCAGCTCTGGGTCAGCAAGTCAAGAAGGACGCCTTCCGAGACCTTCT
TTCCGGCACTGTCGACCCCAGTATAAGATACGCAGCATATCAGTTGAAGC
TCCCGCGGTCAAAGCCCATCCCGTCTTTGGCTCTTAGTTATTTCCCATCG
GACGCGACCATCAGGTCCGAAGTTGAGAAGTTGGACCCCAACTGTCTGAA
GGAGGATGCAGCGGGCACTCGGAGGACCGCTGACGGGGAGGTGCAGCAAC
TCCCTGGAAGCGTCACATGGAGATCGCATACAGTTGGCTTGGAAGATGCC
GCAATCTCACAGGCTCTTGCGTCCGCAGCGGCAGCTGAGTCTCGTCTCAC
TACGTGGCTTGCGGAAGGTGAGGGCAAAAACGCCTCCTCGAAAGATAAAG
CCGCTGCCTACGATAATGTTATCATCGCCAGTCAAGATGCCGTCGATGCT
ACAAAGACTGCGATCGATGACCTTGCCGGAGAGGGAGTTGACCCGAGTGA
TAAGAGAATGCAGGCTCTGCAAATAACGCGGACTGCTGTTAACTATGATC
TGGTTGGGTGGAGAATCGGACGGAACCGTGTCCTTTGCGGAGACAACGAC
GGCGTTTCATTCGAATCTGTCTCAACCAAGTTACCCAAGAGTGCCAAGGC
TACTGCCAAACAGGACGATGCTACGGGTAAGAAGCTGGCACGGCTGCGCG
AAAGAGTCGTCCTGTATGATTCTACCCTTCAAAGTATCGAGTTCATTCTT
GAGCTTCCCGGAGTTGCCGCGGATACGGCGTTTGTTCGCGAATTAGATGC
AAAGCGGCGGTACTTCCGTGCTTTAAGGTACGGCAGCGCAGCCCTTCCAT
ACCGATAACCTGCTAACTGGAGTCTTTCTTAGATGTCTGACCATTGGACG
GTCGCACGGAATCCTGGGCAAGTCTACCAATGCCCTCGCCCTATTTGCGC
AGGCTTTGGCCCTTGTCACAGAGACCGCACGGTCGCCGCAATCCTTGACT
GAAACGGAAGGACCACCGAGGCTGGATATTTCCCGTAGTCAGGTCCAGAC
TCTGGAGCTGACCTTGAAGGGCCTGGTTGCGCAATACCGCGGTTTGGTGA
CTTTGGAGAAGATGTCCGCTGAAGCACAGTCAAAATCTGTAACTCAGCGA
CCCGCAGTCGAACGTCTACACGATTTTGCCGGTGATGCTCTGGATTTGAC
CAACATTGTTCCTTACCCCCCTCAGATGCAGCCGATTCCAGTGAAGCCTT
TGTTCCTGGACGTGGCTTGGAACTACATCGAGTACCCTCGTCAAAGCACG
CCTGCTGCAGACAACAGTCAGGCTCAACCGGAACCACAGCCGGAAGAGAA
GAAGGGTGGACGACGCGGCTGGTTCGGCTTTGGTCGGTAG
back to top

Coding sequence (CDS) from alignment at ch7:2199515..2201504+

>KJC3_010053-T1 ID=KJC3_010053-T1|Name=KJC3_010053-T1|organism=Aspergillus niger KJC3|type=CDS|length=5526bp|location=Sequence derived from alignment at ch7:2199515..2201504+ (Aspergillus niger KJC3)
ATGGAGATCACCGACTTCATTTTCTCCCAGAGGGAGGAGAGTCTCTTGAC
GGGAAACTACAACGCTTATCGAGCACACACGACTCGCAAGTTGCACAGCG
CCCGCCTGCGACTTGGACAGACCACCCCCAAACGCAGCAAGTACATTGCC
AAACGACCTGTGACGGCGGAAGATGTGAACAGCAATGTGGAATACGTCCA
CACCCTACTCATCAGCGCCGAACGGGCATGGGCGAACGCAATGCACATGA
AGACCACTCACTCGGCAGACCCATCGGCCAAGGGGGTTAGCGGTACGACT
AGGGGGCACATTATTTCGAAACTACGGAAGGCAGTTACATTTGCGAAGCA
ATTGGTGCACGTTCTCGAGGATCAAGAAACTTCTGGTGCTGCAGACACTG
ATGTCCTCGAAGCTCGTGCATATCTGGCGTCCCTCTTGGGAGCATACTTC
TTGGAGAAGCGCAATTGGGAGCAGTGTCTCCAAAACTACTCCGTGTCAAG
AGTGATCTATGCAGCTCTGGGTCAGCAAGTCAAGAAGGACGCCTTCCGAG
ACCTTCTTTCCGGCACTGTCGACCCCAGTATAAGATACGCAGCATATCAG
TTGAAGCTCCCGCGGTCAAAGCCCATCCCGTCTTTGGCTCTTAGTTATTT
CCCATCGGACGCGACCATCAGGTCCGAAGTTGAGAAGTTGGACCCCAACT
GTCTGAAGGAGGATGCAGCGGGCACTCGGAGGACCGCTGACGGGGAGGTG
CAGCAACTCCCTGGAAGCGTCACATGGAGATCGCATACAGTTGGCTTGGA
AGATGCCGCAATCTCACAGGCTCTTGCGTCCGCAGCGGCAGCTGAGTCTC
GTCTCACTACGTGGCTTGCGGAAGGTGAGGGCAAAAACGCCTCCTCGAAA
GATAAAGCCGCTGCCTACGATAATGTTATCATCGCCAGTCAAGATGCCGT
CGATGCTACAAAGACTGCGATCGATGACCTTGCCGGAGAGGGAGTTGACC
CGAGTGATAAGAGAATGCAGGCTCTGCAAATAACGCGGACTGCTGTTAAC
TATGATCTGGTTGGGTGGAGAATCGGACGGAACCGTGTCCTTTGCGGAGA
CAACGACGGCGTTTCATTCGAATCTGTCTCAACCAAGTTACCCAAGAGTG
CCAAGGCTACTGCCAAACAGGACGATGCTACGGGTAAGAAGCTGGCACGG
CTGCGCGAAAGAGTCGTCCTGTATGATTCTACCCTTCAAAGTATCGAGTT
CATTCTTGAGCTTCCCGGAGTTGCCGCGGATACGGCGTTTGTTCGCGAAT
TAGATGCAAAGCGGCGGTACTTCCGTGCTTTAAGATGTCTGACCATTGGA
CGGTCGCACGGAATCCTGGGCAAGTCTACCAATGCCCTCGCCCTATTTGC
GCAGGCTTTGGCCCTTGTCACAGAGACCGCACGGTCGCCGCAATCCTTGA
CTGAAACGGAAGGACCACCGAGGCTGGATATTTCCCGTAGTCAGGTCCAG
ACTCTGGAGCTGACCTTGAAGGGCCTGGTTGCGCAATACCGCGGTTTGGT
GACTTTGGAGAAGATGTCCGCTGAAGCACAGTCAAAATCTGTAACTCAGC
GACCCGCAGTCGAACGTCTACACGATTTTGCCGGTGATGCTCTGGATTTG
ACCAACATTGTTCCTTACCCCCCTCAGATGCAGCCGATTCCAGTGAAGCC
TTTGTTCCTGGACGTGGCTTGGAACTACATCGAGTACCCTCGTCAAAGCA
CGCCTGCTGCAGACAACAGTCAGGCTCAACCGGAACCACAGCCGGAAGAG
AAGAAGGGTGGACGACGCGGCTGGTTCGGCTTTGGTCGGTAGATGGAGAT
CACCGACTTCATTTTCTCCCAGAGGGAGGAGAGTCTCTTGACGGGAAACT
ACAACGCTTATCGAGCACACACGACTCGCAAGTTGCACAGCGCCCGCCTG
CGACTTGGACAGACCACCCCCAAACGCAGCAAGTACATTGCCAAACGACC
TGTGACGGCGGAAGATGTGAACAGCAATGTGGAATACGTCCACACCCTAC
TCATCAGCGCCGAACGGGCATGGGCGAACGCAATGCACATGAAGACCACT
CACTCGGCAGACCCATCGGCCAAGGGGGTTAGCGGTACGACTAGGGGGCA
CATTATTTCGAAACTACGGAAGGCAGTTACATTTGCGAAGCAATTGGTGC
ACGTTCTCGAGGATCAAGAAACTTCTGGTGCTGCAGACACTGATGTCCTC
GAAGCTCGTGCATATCTGGCGTCCCTCTTGGGAGCATACTTCTTGGAGAA
GCGCAATTGGGAGCAGTGTCTCCAAAACTACTCCGTGTCAAGAGTGATCT
ATGCAGCTCTGGGTCAGCAAGTCAAGAAGGACGCCTTCCGAGACCTTCTT
TCCGGCACTGTCGACCCCAGTATAAGATACGCAGCATATCAGTTGAAGCT
CCCGCGGTCAAAGCCCATCCCGTCTTTGGCTCTTAGTTATTTCCCATCGG
ACGCGACCATCAGGTCCGAAGTTGAGAAGTTGGACCCCAACTGTCTGAAG
GAGGATGCAGCGGGCACTCGGAGGACCGCTGACGGGGAGGTGCAGCAACT
CCCTGGAAGCGTCACATGGAGATCGCATACAGTTGGCTTGGAAGATGCCG
CAATCTCACAGGCTCTTGCGTCCGCAGCGGCAGCTGAGTCTCGTCTCACT
ACGTGGCTTGCGGAAGGTGAGGGCAAAAACGCCTCCTCGAAAGATAAAGC
CGCTGCCTACGATAATGTTATCATCGCCAGTCAAGATGCCGTCGATGCTA
CAAAGACTGCGATCGATGACCTTGCCGGAGAGGGAGTTGACCCGAGTGAT
AAGAGAATGCAGGCTCTGCAAATAACGCGGACTGCTGTTAACTATGATCT
GGTTGGGTGGAGAATCGGACGGAACCGTGTCCTTTGCGGAGACAACGACG
GCGTTTCATTCGAATCTGTCTCAACCAAGTTACCCAAGAGTGCCAAGGCT
ACTGCCAAACAGGACGATGCTACGGGTAAGAAGCTGGCACGGCTGCGCGA
AAGAGTCGTCCTGTATGATTCTACCCTTCAAAGTATCGAGTTCATTCTTG
AGCTTCCCGGAGTTGCCGCGGATACGGCGTTTGTTCGCGAATTAGATGCA
AAGCGGCGGTACTTCCGTGCTTTAAGATGTCTGACCATTGGACGGTCGCA
CGGAATCCTGGGCAAGTCTACCAATGCCCTCGCCCTATTTGCGCAGGCTT
TGGCCCTTGTCACAGAGACCGCACGGTCGCCGCAATCCTTGACTGAAACG
GAAGGACCACCGAGGCTGGATATTTCCCGTAGTCAGGTCCAGACTCTGGA
GCTGACCTTGAAGGGCCTGGTTGCGCAATACCGCGGTTTGGTGACTTTGG
AGAAGATGTCCGCTGAAGCACAGTCAAAATCTGTAACTCAGCGACCCGCA
GTCGAACGTCTACACGATTTTGCCGGTGATGCTCTGGATTTGACCAACAT
TGTTCCTTACCCCCCTCAGATGCAGCCGATTCCAGTGAAGCCTTTGTTCC
TGGACGTGGCTTGGAACTACATCGAGTACCCTCGTCAAAGCACGCCTGCT
GCAGACAACAGTCAGGCTCAACCGGAACCACAGCCGGAAGAGAAGAAGGG
TGGACGACGCGGCTGGTTCGGCTTTGGTCGGTAGATGGAGATCACCGACT
TCATTTTCTCCCAGAGGGAGGAGAGTCTCTTGACGGGAAACTACAACGCT
TATCGAGCACACACGACTCGCAAGTTGCACAGCGCCCGCCTGCGACTTGG
ACAGACCACCCCCAAACGCAGCAAGTACATTGCCAAACGACCTGTGACGG
CGGAAGATGTGAACAGCAATGTGGAATACGTCCACACCCTACTCATCAGC
GCCGAACGGGCATGGGCGAACGCAATGCACATGAAGACCACTCACTCGGC
AGACCCATCGGCCAAGGGGGTTAGCGGTACGACTAGGGGGCACATTATTT
CGAAACTACGGAAGGCAGTTACATTTGCGAAGCAATTGGTGCACGTTCTC
GAGGATCAAGAAACTTCTGGTGCTGCAGACACTGATGTCCTCGAAGCTCG
TGCATATCTGGCGTCCCTCTTGGGAGCATACTTCTTGGAGAAGCGCAATT
GGGAGCAGTGTCTCCAAAACTACTCCGTGTCAAGAGTGATCTATGCAGCT
CTGGGTCAGCAAGTCAAGAAGGACGCCTTCCGAGACCTTCTTTCCGGCAC
TGTCGACCCCAGTATAAGATACGCAGCATATCAGTTGAAGCTCCCGCGGT
CAAAGCCCATCCCGTCTTTGGCTCTTAGTTATTTCCCATCGGACGCGACC
ATCAGGTCCGAAGTTGAGAAGTTGGACCCCAACTGTCTGAAGGAGGATGC
AGCGGGCACTCGGAGGACCGCTGACGGGGAGGTGCAGCAACTCCCTGGAA
GCGTCACATGGAGATCGCATACAGTTGGCTTGGAAGATGCCGCAATCTCA
CAGGCTCTTGCGTCCGCAGCGGCAGCTGAGTCTCGTCTCACTACGTGGCT
TGCGGAAGGTGAGGGCAAAAACGCCTCCTCGAAAGATAAAGCCGCTGCCT
ACGATAATGTTATCATCGCCAGTCAAGATGCCGTCGATGCTACAAAGACT
GCGATCGATGACCTTGCCGGAGAGGGAGTTGACCCGAGTGATAAGAGAAT
GCAGGCTCTGCAAATAACGCGGACTGCTGTTAACTATGATCTGGTTGGGT
GGAGAATCGGACGGAACCGTGTCCTTTGCGGAGACAACGACGGCGTTTCA
TTCGAATCTGTCTCAACCAAGTTACCCAAGAGTGCCAAGGCTACTGCCAA
ACAGGACGATGCTACGGGTAAGAAGCTGGCACGGCTGCGCGAAAGAGTCG
TCCTGTATGATTCTACCCTTCAAAGTATCGAGTTCATTCTTGAGCTTCCC
GGAGTTGCCGCGGATACGGCGTTTGTTCGCGAATTAGATGCAAAGCGGCG
GTACTTCCGTGCTTTAAGATGTCTGACCATTGGACGGTCGCACGGAATCC
TGGGCAAGTCTACCAATGCCCTCGCCCTATTTGCGCAGGCTTTGGCCCTT
GTCACAGAGACCGCACGGTCGCCGCAATCCTTGACTGAAACGGAAGGACC
ACCGAGGCTGGATATTTCCCGTAGTCAGGTCCAGACTCTGGAGCTGACCT
TGAAGGGCCTGGTTGCGCAATACCGCGGTTTGGTGACTTTGGAGAAGATG
TCCGCTGAAGCACAGTCAAAATCTGTAACTCAGCGACCCGCAGTCGAACG
TCTACACGATTTTGCCGGTGATGCTCTGGATTTGACCAACATTGTTCCTT
ACCCCCCTCAGATGCAGCCGATTCCAGTGAAGCCTTTGTTCCTGGACGTG
GCTTGGAACTACATCGAGTACCCTCGTCAAAGCACGCCTGCTGCAGACAA
CAGTCAGGCTCAACCGGAACCACAGCCGGAAGAGAAGAAGGGTGGACGAC
GCGGCTGGTTCGGCTTTGGTCGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005786signal recognition particle, endoplasmic reticulum targeting
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0005047signal recognition particle binding
GO:00083127S RNA binding
GO:0030942endoplasmic reticulum signal peptide binding
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010053KJC3_010053Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010053-T1.exon1KJC3_010053-T1.exon1Aspergillus niger KJC3exon
KJC3_010053-T1.exon2KJC3_010053-T1.exon2Aspergillus niger KJC3exon
KJC3_010053-T1.exon3KJC3_010053-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010053-T1.cdsKJC3_010053-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010053-T1KJC3_010053-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR034652
DBxrefInterPro:IPR038253
DBxrefInterPro:IPR026258
DBxrefPFAM:PF16969
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2199515..2201504 +
Powered by Drupal