You are here

Home

KJC3_010058-T1, KJC3_010058-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010058-T1
Unique NameKJC3_010058-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2219126..2220898+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010058-T1 ID=KJC3_010058-T1|Name=KJC3_010058-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1773bp|location=Sequence derived from alignment at ch7:2219126..2220898+ (Aspergillus niger KJC3)
TTTCGTTGCCTAGATTGCGGTGCTGTCGGTTAATCTGGAGAAGCTAGGGC
CGGACCAGAATTGAATACTGGGCGTTGATTTCCCTAAAGCAAGCTCTGAC
CTGGCGAGAGGCCCGTTCATCCGTTGCATCCAAGTATAGACTACTCATTG
TTAACGCTATACATCGGGATACAAAATTAATTTATATCGTCAAATTGTTT
CATTCGGAGGCTGGCCTGCAGAGACTCAAATTTTATACACACCAGTGTTC
TGAGATACACTGCCCGCCTCAACGATGGACCAGCCATCTGAGAATAACGA
GCCAGACCACATCACGGAGACAAGTCTGGAAACAGAGCAGAAGACTGCCG
CCGAAGCCGAGGCCCTTGAGTCAGAAAGGCTCAAGAATGCTGAGCTCGAA
AGACGCAGAGCCGAGAAAGAAACGGCCATTCGTCAAGCATGCGACTTGCG
CGATTTTGATGCACTAGTCTCATATGCTACCTCAGAAGGCGGCTTCCTCA
ACGATGATGTCCGGCGAACTGCCTGTGAGAACTACCCTATAACGCTCACA
TGCACTTTCTGACGTTCTATCAGGGCCTATCCTTCTACAGTGTGATCGAC
GTGGACCCAATTTTGATTTTGCAGGATGGGAACAACTACCTGCACATAGT
GACGAAGAACAAGTTCAGCTTGATGTGAACAGGTCGTTCGTCTACTACCC
TGAATGTAAGTCACCCTTTTTATGGCTCTCGGTGGTGTCTAACTTGACCA
GGCTCTGACCAGGAGCTATCCATCAAGAAGGATGAGCTCTCCAAGTTGAT
CAAGCAAGTCTTGCGGTGCTTTCCCATGCTCTGCTACTTTCAAGGCTATC
ATGATATCGTTCAAGTCCTGCTATTAGTGCTTGGTGGCCAAAATAGTGCT
GCTGCTGTTGCACAAATTTCCCTTCTCCGGATAAGAGATTACATGTTGCC
GTCCCTTTCGCCGGCGCTGAAACATCTAGAGCTGATCCCTGCGATCATCG
AAAAGGCCGATCCTGCATTACGACGTCATCTCGCCGAAATCAAACCATTC
TTTGCACTCGCTGCGACTCTAACAATGTACTCGCACGATATTCAAGAATA
TAGTGACATTGCACGCCTTTTTGACTTTCTGCTGGCCCAGGAACCGGTAG
TCTCCATATACCTTTTTGCGGCCATCATCCTCTCGCGCAAGAAAGAATTA
CTTGAGTTTTCAGTCGATGAAACCGATATGTTGCATTTTACCCTGTCCAA
GCTTCCAAATCCCTTGGATCTTGAGGGTCTGATATCCCGCGCGATGCAGC
TTTTCGAAGCTCACCCACCGGAAAGTCTACCATTTGGGGCCTGGAAGCGC
ATTCCAGAGTGCAGTGTGCTCAAGTCTTCACGGGACCTTGTCAGGATCCA
AGCACCTGATGAGACAGTCGGCCTCTTCGCGAAACAAGTACGGCATCTAC
GTTACGAGGAGCGGAAGGAGAAGACCGTTGCTTTCTTGTGGAATCACAGA
CGGACTATCGGCTCCGTGGCTGTGACGATATTTATTGGTGCTATGTCGTT
CTGGATCAAGAAGAGGGGATTTGACAATACGATATGGTCGTATGTCAGTA
GATTCCATGGGGCTTTGCAGGCCCGAGGTTACATTTAACCTTATGTCACC
ATTGGGAAAAGACAAAAAGGCACCGGCTCACAAAAAATTATGCTTGGGAA
ATATATGTAATATTACTGCACACGAAGAAATATGTGATAAGAAAGGAAAT
ATAATAGTTTTGAGAGATGAAGA
back to top

Coding sequence (CDS) from alignment at ch7:2219126..2220898+

>KJC3_010058-T1 ID=KJC3_010058-T1|Name=KJC3_010058-T1|organism=Aspergillus niger KJC3|type=CDS|length=3807bp|location=Sequence derived from alignment at ch7:2219126..2220898+ (Aspergillus niger KJC3)
ATGGACCAGCCATCTGAGAATAACGAGCCAGACCACATCACGGAGACAAG
TCTGGAAACAGAGCAGAAGACTGCCGCCGAAGCCGAGGCCCTTGAGTCAG
AAAGGCTCAAGAATGCTGAGCTCGAAAGACGCAGAGCCGAGAAAGAAACG
GCCATTCGTCAAGCATGCGACTTGCGCGATTTTGATGCACTAGTCTCATA
TGCTACCTCAGAAGGCGGCTTCCTCAACGATGATGTCCGGCGAACTGCCT
GGCCTATCCTTCTACAGTGTGATCGACGTGGACCCAATTTTGATTTTGCA
GGATGGGAACAACTACCTGCACATAGTGACGAAGAACAAGTTCAGCTTGA
TGTGAACAGGTCGTTCGTCTACTACCCTGAATGCTCTGACCAGGAGCTAT
CCATCAAGAAGGATGAGCTCTCCAAGTTGATCAAGCAAGTCTTGCGGTGC
TTTCCCATGCTCTGCTACTTTCAAGGCTATCATGATATCGTTCAAGTCCT
GCTATTAGTGCTTGGTGGCCAAAATAGTGCTGCTGCTGTTGCACAAATTT
CCCTTCTCCGGATAAGAGATTACATGTTGCCGTCCCTTTCGCCGGCGCTG
AAACATCTAGAGCTGATCCCTGCGATCATCGAAAAGGCCGATCCTGCATT
ACGACGTCATCTCGCCGAAATCAAACCATTCTTTGCACTCGCTGCGACTC
TAACAATGTACTCGCACGATATTCAAGAATATAGTGACATTGCACGCCTT
TTTGACTTTCTGCTGGCCCAGGAACCGGTAGTCTCCATATACCTTTTTGC
GGCCATCATCCTCTCGCGCAAGAAAGAATTACTTGAGTTTTCAGTCGATG
AAACCGATATGTTGCATTTTACCCTGTCCAAGCTTCCAAATCCCTTGGAT
CTTGAGGGTCTGATATCCCGCGCGATGCAGCTTTTCGAAGCTCACCCACC
GGAAAGTCTACCATTTGGGGCCTGGAAGCGCATTCCAGAGTGCAGTGTGC
TCAAGTCTTCACGGGACCTTGTCAGGATCCAAGCACCTGATGAGACAGTC
GGCCTCTTCGCGAAACAAGTACGGCATCTACGTTACGAGGAGCGGAAGGA
GAAGACCGTTGCTTTCTTGTGGAATCACAGACGGACTATCGGCTCCGTGG
CTGTGACGATATTTATTGGTGCTATGTCGTTCTGGATCAAGAAGAGGGGA
TTTGACAATACGATATGGTCGTATGTCAGTAGATTCCATGGGGCTTTGCA
GGCCCGAGGTTACATTTAAATGGACCAGCCATCTGAGAATAACGAGCCAG
ACCACATCACGGAGACAAGTCTGGAAACAGAGCAGAAGACTGCCGCCGAA
GCCGAGGCCCTTGAGTCAGAAAGGCTCAAGAATGCTGAGCTCGAAAGACG
CAGAGCCGAGAAAGAAACGGCCATTCGTCAAGCATGCGACTTGCGCGATT
TTGATGCACTAGTCTCATATGCTACCTCAGAAGGCGGCTTCCTCAACGAT
GATGTCCGGCGAACTGCCTGGCCTATCCTTCTACAGTGTGATCGACGTGG
ACCCAATTTTGATTTTGCAGGATGGGAACAACTACCTGCACATAGTGACG
AAGAACAAGTTCAGCTTGATGTGAACAGGTCGTTCGTCTACTACCCTGAA
TGCTCTGACCAGGAGCTATCCATCAAGAAGGATGAGCTCTCCAAGTTGAT
CAAGCAAGTCTTGCGGTGCTTTCCCATGCTCTGCTACTTTCAAGGCTATC
ATGATATCGTTCAAGTCCTGCTATTAGTGCTTGGTGGCCAAAATAGTGCT
GCTGCTGTTGCACAAATTTCCCTTCTCCGGATAAGAGATTACATGTTGCC
GTCCCTTTCGCCGGCGCTGAAACATCTAGAGCTGATCCCTGCGATCATCG
AAAAGGCCGATCCTGCATTACGACGTCATCTCGCCGAAATCAAACCATTC
TTTGCACTCGCTGCGACTCTAACAATGTACTCGCACGATATTCAAGAATA
TAGTGACATTGCACGCCTTTTTGACTTTCTGCTGGCCCAGGAACCGGTAG
TCTCCATATACCTTTTTGCGGCCATCATCCTCTCGCGCAAGAAAGAATTA
CTTGAGTTTTCAGTCGATGAAACCGATATGTTGCATTTTACCCTGTCCAA
GCTTCCAAATCCCTTGGATCTTGAGGGTCTGATATCCCGCGCGATGCAGC
TTTTCGAAGCTCACCCACCGGAAAGTCTACCATTTGGGGCCTGGAAGCGC
ATTCCAGAGTGCAGTGTGCTCAAGTCTTCACGGGACCTTGTCAGGATCCA
AGCACCTGATGAGACAGTCGGCCTCTTCGCGAAACAAGTACGGCATCTAC
GTTACGAGGAGCGGAAGGAGAAGACCGTTGCTTTCTTGTGGAATCACAGA
CGGACTATCGGCTCCGTGGCTGTGACGATATTTATTGGTGCTATGTCGTT
CTGGATCAAGAAGAGGGGATTTGACAATACGATATGGTCGTATGTCAGTA
GATTCCATGGGGCTTTGCAGGCCCGAGGTTACATTTAAATGGACCAGCCA
TCTGAGAATAACGAGCCAGACCACATCACGGAGACAAGTCTGGAAACAGA
GCAGAAGACTGCCGCCGAAGCCGAGGCCCTTGAGTCAGAAAGGCTCAAGA
ATGCTGAGCTCGAAAGACGCAGAGCCGAGAAAGAAACGGCCATTCGTCAA
GCATGCGACTTGCGCGATTTTGATGCACTAGTCTCATATGCTACCTCAGA
AGGCGGCTTCCTCAACGATGATGTCCGGCGAACTGCCTGGCCTATCCTTC
TACAGTGTGATCGACGTGGACCCAATTTTGATTTTGCAGGATGGGAACAA
CTACCTGCACATAGTGACGAAGAACAAGTTCAGCTTGATGTGAACAGGTC
GTTCGTCTACTACCCTGAATGCTCTGACCAGGAGCTATCCATCAAGAAGG
ATGAGCTCTCCAAGTTGATCAAGCAAGTCTTGCGGTGCTTTCCCATGCTC
TGCTACTTTCAAGGCTATCATGATATCGTTCAAGTCCTGCTATTAGTGCT
TGGTGGCCAAAATAGTGCTGCTGCTGTTGCACAAATTTCCCTTCTCCGGA
TAAGAGATTACATGTTGCCGTCCCTTTCGCCGGCGCTGAAACATCTAGAG
CTGATCCCTGCGATCATCGAAAAGGCCGATCCTGCATTACGACGTCATCT
CGCCGAAATCAAACCATTCTTTGCACTCGCTGCGACTCTAACAATGTACT
CGCACGATATTCAAGAATATAGTGACATTGCACGCCTTTTTGACTTTCTG
CTGGCCCAGGAACCGGTAGTCTCCATATACCTTTTTGCGGCCATCATCCT
CTCGCGCAAGAAAGAATTACTTGAGTTTTCAGTCGATGAAACCGATATGT
TGCATTTTACCCTGTCCAAGCTTCCAAATCCCTTGGATCTTGAGGGTCTG
ATATCCCGCGCGATGCAGCTTTTCGAAGCTCACCCACCGGAAAGTCTACC
ATTTGGGGCCTGGAAGCGCATTCCAGAGTGCAGTGTGCTCAAGTCTTCAC
GGGACCTTGTCAGGATCCAAGCACCTGATGAGACAGTCGGCCTCTTCGCG
AAACAAGTACGGCATCTACGTTACGAGGAGCGGAAGGAGAAGACCGTTGC
TTTCTTGTGGAATCACAGACGGACTATCGGCTCCGTGGCTGTGACGATAT
TTATTGGTGCTATGTCGTTCTGGATCAAGAAGAGGGGATTTGACAATACG
ATATGGTCGTATGTCAGTAGATTCCATGGGGCTTTGCAGGCCCGAGGTTA
CATTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010058KJC3_010058Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010058-T1KJC3_010058-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010058-T1.utr5p1KJC3_010058-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010058-T1.exon1KJC3_010058-T1.exon1Aspergillus niger KJC3exon
KJC3_010058-T1.exon2KJC3_010058-T1.exon2Aspergillus niger KJC3exon
KJC3_010058-T1.exon3KJC3_010058-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010058-T1.cdsKJC3_010058-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010058-T1.utr3p1KJC3_010058-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092642UD
DBxrefInterPro:IPR035969
DBxrefInterPro:IPR000195
DBxrefPFAM:PF00566
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2219126..2220898 +
Powered by Drupal