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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2324255..2326529- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010093-T1 ID=KJC3_010093-T1|Name=KJC3_010093-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2275bp|location=Sequence derived from alignment at ch7:2324255..2326529- (Aspergillus niger KJC3) GCCATCTCTCACAGCATAGCATTCAGAATTCATTTTGAGGGTGCCTACTT
GTCACTAGCCTATTTTAAGTCTTAGCAAACATATCTACAGCAAAGAATGT
TGATACACGGGTCACGTTGATGGCCTCACGCACTTCTACAGATTGCCGCG
GCGATAGATTGGACGGGGCGCACAATGTCTAGAATCGCCATGGCGATTCC
TTCATGCAACCACCACCACCTGGCCTTCCTAGAGCATTCCCTTGTTGTTG
TTTAGATCAGTAAATGTGTGAATCTTCCTCTATACCTTCGTGAATCTTGA
CAACTCACTTTGACTGACACACGTGACGGCAGAGATTTTTACGTCATTCT
TGTGATTTATCTACTTTAGCCACAGAAGACAGTCTTAACCTGGGCCACAA
TATGCTTGCAGAGCTTCCTCCAGAGATTATACAGCTTATTACAAGCTATT
TGCCATCTGCCAGCGCGCTTGTGAATCTGTCAAGGACCTGTTGGCGCCTA
CACCACGTTGTCGCTGCTCAAGATTGGCGAATCTTCAGATCCTTCGTCGA
GACCAAGTTTCCTGGTGTGGAAACGCCCGAAATCTGGCGAGAGGCCGCTC
AGGCACTCACATCTCGCTCTCGAGCATTAGACAAACACGCAGTCGTCGGA
AGATTTGTCGTACCTGCCTCAGAAGCAGTCAAGGTCGGATCCCATAGTTC
AACACGACGTGACAATCCTACTCATGGATATCGCCCTGCTTTGGACTCGT
ATGAAGTCTGGAATAGCTCTTCGTGGAACGACCGGAAGGAGGTGCTCGCC
TGGGGCGCGGCAGATGAACTAGTCCTGCGCATCACTGAGCCTGGCCCCAA
TTCAAAGGGGAAGTGGGTGGTCTTCAATGATCTCGATCACATCAGTAGCC
ATGATGACATCTGTGGTGTCCATATTCTACGTCCTGGACACCCTTCCAAG
GAGCCCCAGACTGAACATATAGTCGTTGCAAGAGCGCGCGGAGAGCTTTT
CCATCTCTCTATCGACCCTAACAGCGCCTGCCATATGTACAAGCAGCGGT
TCATGACCTCCGGAGGAGGCATAGAGAGAACAGATATGAGTGACGGAAAG
GACCCTATCTTATCTGCCCACTTAAGCGACGGATCGATATCTTTCTTCAG
CACCACTTCTGGAGAGGCGGAAGTCTACCCATTTGCTCGTCTCAATGCCG
ATTCTAGCAACAATGCAACCATCAGCTCTCGCCACAAGTATTCCAAGTTC
CTTTCGCCCTCTCTATTCGCAGTCGGCACAGGACGCATCCACGATGCAAT
TACTATCTCCGCCATCACGCCACAAGGTCTATCACCAAGTCGTGAGCTCA
ATGTGGAGCTGGTAGATTTCGAAAGACTTAATCTCGATACGACCATCAGA
TCCAACGTCAACGCCATTGCTCCACTCGATCCCACCGGACAAGTCTTCCT
CGCAGCCTGGGGTGATCGAGCTATCAGGTACAACCACCCCATCCCCACTA
TTCCACGCTCTATGCTAACACCCTCAGACTGCACGACCTCCGCTCAAACG
AAGAATACGAAAAGACCTACCGTGATACCACGGACCAGAATCCCATCTAC
TGCATCCACCCCTTCGGCCACGACCGCTTCGTCGTCGGCGCCGGCGGTGA
CGCCCTAGTCAAGATCTTCGATTTACGCATGCCCAAACATGACACATACA
GCTATCGTGATGCACGCCCCTCCCGAACCCTTCCCAAGAACAACGAACCA
ATCGTAGACAGCCTCTCAAGCCTCTCCCTCACCCCAACCAACAATAGCAT
CGCCTTCCCCCGCAAAGACATCTCCATCTTCCTCTCCGCCCACCCGCCCT
CCAGCCGGCCCCAAGGCCGTCGCCGCCACAACACCCGCTCCTACCGTGGT
GCAATCTACAGCATGACTTCGCCCTCCCCTTCCTCACCAACTATCTACAC
TGGCGTCGCGGATGGCGTCGTTCGCCTTGACTTCGCCTCTACGGACGACC
TCCTCGGCCCTTGTCAGGATTGGTACCGGGAGCCACTTCTGCTCTCTAAC
GATGTGCGTCTCGACAACACGGTTGCACACACCCGCTCTGCCGACAAAGT
CCTGGATTTATCGGGCTACGAGCGCCCTGAGGATACTACTGCTTCTATTA
CTTTGCGCACGCAGCAGCCGTTTGTGTTTGTCGGGGTGGAGGATGGTCTT
GCGGAGGAGATCACGGGGTGGGATCGGAGGTGGGAGAGGTTGGAGAAACC
GGGGGCGTGGAGACGGGCTGATTGA back to topCoding sequence (CDS) from alignment at ch7:2324255..2326529- >KJC3_010093-T1 ID=KJC3_010093-T1|Name=KJC3_010093-T1|organism=Aspergillus niger KJC3|type=CDS|length=3648bp|location=Sequence derived from alignment at ch7:2324255..2326529- (Aspergillus niger KJC3) ACTGCACGACCTCCGCTCAAACGAAGAATACGAAAAGACCTACCGTGATA CCACGGACCAGAATCCCATCTACTGCATCCACCCCTTCGGCCACGACCGC TTCGTCGTCGGCGCCGGCGGTGACGCCCTAGTCAAGATCTTCGATTTACG CATGCCCAAACATGACACATACAGCTATCGTGATGCACGCCCCTCCCGAA CCCTTCCCAAGAACAACGAACCAATCGTAGACAGCCTCTCAAGCCTCTCC CTCACCCCAACCAACAATAGCATCGCCTTCCCCCGCAAAGACATCTCCAT CTTCCTCTCCGCCCACCCGCCCTCCAGCCGGCCCCAAGGCCGTCGCCGCC ACAACACCCGCTCCTACCGTGGTGCAATCTACAGCATGACTTCGCCCTCC CCTTCCTCACCAACTATCTACACTGGCGTCGCGGATGGCGTCGTTCGCCT TGACTTCGCCTCTACGGACGACCTCCTCGGCCCTTGTCAGGATTGGTACC GGGAGCCACTTCTGCTCTCTAACGATGTGCGTCTCGACAACACGGTTGCA CACACCCGCTCTGCCGACAAAGTCCTGGATTTATCGGGCTACGAGCGCCC TGAGGATACTACTGCTTCTATTACTTTGCGCACGCAGCAGCCGTTTGTGT TTGTCGGGGTGGAGGATGGTCTTGCGGAGGAGATCACGGGGTGGGATCGG AGGTGGGAGAGGTTGGAGAAACCGGGGGCGTGGAGACGGGCTGATTGAAT GCTTGCAGAGCTTCCTCCAGAGATTATACAGCTTATTACAAGCTATTTGC CATCTGCCAGCGCGCTTGTGAATCTGTCAAGGACCTGTTGGCGCCTACAC CACGTTGTCGCTGCTCAAGATTGGCGAATCTTCAGATCCTTCGTCGAGAC CAAGTTTCCTGGTGTGGAAACGCCCGAAATCTGGCGAGAGGCCGCTCAGG CACTCACATCTCGCTCTCGAGCATTAGACAAACACGCAGTCGTCGGAAGA TTTGTCGTACCTGCCTCAGAAGCAGTCAAGGTCGGATCCCATAGTTCAAC ACGACGTGACAATCCTACTCATGGATATCGCCCTGCTTTGGACTCGTATG AAGTCTGGAATAGCTCTTCGTGGAACGACCGGAAGGAGGTGCTCGCCTGG GGCGCGGCAGATGAACTAGTCCTGCGCATCACTGAGCCTGGCCCCAATTC AAAGGGGAAGTGGGTGGTCTTCAATGATCTCGATCACATCAGTAGCCATG ATGACATCTGTGGTGTCCATATTCTACGTCCTGGACACCCTTCCAAGGAG CCCCAGACTGAACATATAGTCGTTGCAAGAGCGCGCGGAGAGCTTTTCCA TCTCTCTATCGACCCTAACAGCGCCTGCCATATGTACAAGCAGCGGTTCA TGACCTCCGGAGGAGGCATAGAGAGAACAGATATGAGTGACGGAAAGGAC CCTATCTTATCTGCCCACTTAAGCGACGGATCGATATCTTTCTTCAGCAC CACTTCTGGAGAGGCGGAAGTCTACCCATTTGCTCGTCTCAATGCCGATT CTAGCAACAATGCAACCATCAGCTCTCGCCACAAGTATTCCAAGTTCCTT TCGCCCTCTCTATTCGCAGTCGGCACAGGACGCATCCACGATGCAATTAC TATCTCCGCCATCACGCCACAAGGTCTATCACCAAGTCGTGAGCTCAATG TGGAGCTGGTAGATTTCGAAAGACTTAATCTCGATACGACCATCAGATCC AACGTCAACGCCATTGCTCCACTCGATCCCACCGGACAAGTCTTCCTCGC AGCCTGGGGTGATCGAGCTATCAGACTGCACGACCTCCGCTCAAACGAAG AATACGAAAAGACCTACCGTGATACCACGGACCAGAATCCCATCTACTGC ATCCACCCCTTCGGCCACGACCGCTTCGTCGTCGGCGCCGGCGGTGACGC CCTAGTCAAGATCTTCGATTTACGCATGCCCAAACATGACACATACAGCT ATCGTGATGCACGCCCCTCCCGAACCCTTCCCAAGAACAACGAACCAATC GTAGACAGCCTCTCAAGCCTCTCCCTCACCCCAACCAACAATAGCATCGC CTTCCCCCGCAAAGACATCTCCATCTTCCTCTCCGCCCACCCGCCCTCCA GCCGGCCCCAAGGCCGTCGCCGCCACAACACCCGCTCCTACCGTGGTGCA ATCTACAGCATGACTTCGCCCTCCCCTTCCTCACCAACTATCTACACTGG CGTCGCGGATGGCGTCGTTCGCCTTGACTTCGCCTCTACGGACGACCTCC TCGGCCCTTGTCAGGATTGGTACCGGGAGCCACTTCTGCTCTCTAACGAT GTGCGTCTCGACAACACGGTTGCACACACCCGCTCTGCCGACAAAGTCCT GGATTTATCGGGCTACGAGCGCCCTGAGGATACTACTGCTTCTATTACTT TGCGCACGCAGCAGCCGTTTGTGTTTGTCGGGGTGGAGGATGGTCTTGCG GAGGAGATCACGGGGTGGGATCGGAGGTGGGAGAGGTTGGAGAAACCGGG GGCGTGGAGACGGGCTGATTGAATGCTTGCAGAGCTTCCTCCAGAGATTA TACAGCTTATTACAAGCTATTTGCCATCTGCCAGCGCGCTTGTGAATCTG TCAAGGACCTGTTGGCGCCTACACCACGTTGTCGCTGCTCAAGATTGGCG AATCTTCAGATCCTTCGTCGAGACCAAGTTTCCTGGTGTGGAAACGCCCG AAATCTGGCGAGAGGCCGCTCAGGCACTCACATCTCGCTCTCGAGCATTA GACAAACACGCAGTCGTCGGAAGATTTGTCGTACCTGCCTCAGAAGCAGT CAAGGTCGGATCCCATAGTTCAACACGACGTGACAATCCTACTCATGGAT ATCGCCCTGCTTTGGACTCGTATGAAGTCTGGAATAGCTCTTCGTGGAAC GACCGGAAGGAGGTGCTCGCCTGGGGCGCGGCAGATGAACTAGTCCTGCG CATCACTGAGCCTGGCCCCAATTCAAAGGGGAAGTGGGTGGTCTTCAATG ATCTCGATCACATCAGTAGCCATGATGACATCTGTGGTGTCCATATTCTA CGTCCTGGACACCCTTCCAAGGAGCCCCAGACTGAACATATAGTCGTTGC AAGAGCGCGCGGAGAGCTTTTCCATCTCTCTATCGACCCTAACAGCGCCT GCCATATGTACAAGCAGCGGTTCATGACCTCCGGAGGAGGCATAGAGAGA ACAGATATGAGTGACGGAAAGGACCCTATCTTATCTGCCCACTTAAGCGA CGGATCGATATCTTTCTTCAGCACCACTTCTGGAGAGGCGGAAGTCTACC CATTTGCTCGTCTCAATGCCGATTCTAGCAACAATGCAACCATCAGCTCT CGCCACAAGTATTCCAAGTTCCTTTCGCCCTCTCTATTCGCAGTCGGCAC AGGACGCATCCACGATGCAATTACTATCTCCGCCATCACGCCACAAGGTC TATCACCAAGTCGTGAGCTCAATGTGGAGCTGGTAGATTTCGAAAGACTT AATCTCGATACGACCATCAGATCCAACGTCAACGCCATTGCTCCACTCGA TCCCACCGGACAAGTCTTCCTCGCAGCCTGGGGTGATCGAGCTATCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_010093-T1.utr5p1 | KJC3_010093-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036322 |
DBxref | InterPro:IPR036047 |
DBxref | InterPro:IPR001810 |
DBxref | PFAM:PF12937 |
DBxref | PFAM:PF00646 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:2324255..2326529 - |
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