|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2339056..2341182- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010100-T1 ID=KJC3_010100-T1|Name=KJC3_010100-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2127bp|location=Sequence derived from alignment at ch7:2339056..2341182- (Aspergillus niger KJC3)
TGCCAATGTCTGGGCAATTAAATCATTCAACAAAGGAGAGTTGAGTTTGG
GATGATAGTAATGGTGTATCACTACTTACTACTAAAAGTACTACAGGTAT
AGACGCACGAGCAAATTCCCCGACTGGCTTGTTCCGATGATCCCTCTTTC
CTTCTATCAGGGTTTGGAATTGATGGACCGGACTATCAATTACTTGCTAT
TCTCTCAGTAGAATTCTCATTATTGTTATTATAATATTATTATTATCTCT
TGTTATGGAGATAAACAGTGGTATTAATCCAACGCCCCGCCGAGGCTGAG
AGAATTGTCGTCATCCGGTCCGCCCGCCCAGAGAAGTGAACCCGCCCGCT
TGCGTCTTCGCGACTTTCTTTCTCTCTGTCCGTGTCTTTATCGCAGGTAC
TCCAGATACTAATAAATATATTAACTCCCCCCATCGTCTCCGCTGTTCCC
GGACTGTCCCCTGCTCTGCCCTGCCAGTTCTTCTCCACCTCCCTCTTCTC
CATCCTCTCCCCTACTACTCTTCTCTCCTCCCCTCCCTCTTTCTCTCTCA
TATTGCTTATCACACTTGCTTATCATGCCACTCACCATCCTCTCTCAAAC
ACAACTCCGCTCCCTCCTCCTGTCGCTCTCTCGCGACCAGATCATTGAGC
TCCAGCAGAACCTCTCCAATGCTCTGCGGGACTACTCCACTGGTAGCCAA
GAAAAGGGCTGTGCGGCTGCCTACCAACCCACGCGCACGGCCATCACCCG
TCAGAATGGCTGCACCACCTTGTTCATGCCCGCTAGCACGGGCAACACCC
TGGGCATGAAGATGATCTCCTTACAAGATAACAGTCAGGCCGGCTGCTCC
GTCGACCCAGCCTTAGACTTGTCCTCCGCAGCCTCCCGGACCACCACCAC
CTCCTCCTCCAGCCGAGTCAACCAGCGCAAGTCCATGTCCTCCATCTCCT
CCGAAGGCAGCGAGCAATCCATGTCCTCCCAAGAAGACGACGACCACACC
TCCTCCTCTCCCTCCTCCAGCAGCAAATCGCTCACCCCCGGCTGCGTGAA
CCAGCAACCCATCGATACCGGAATGTCCAACACCATGGGTGCCTGGCCCG
CCGCCGGCTCCCGTGATACCTCCCCGCAAGGATCAGTGACATTGATTGAC
GAGACGAGCCTACCCTTTGGATTGATCAACGCTCATGAACTTACCCCCTT
TCGCACCGCCTTGACCGCCACCATGACCCTCAACAAACGTAAGCGCGTGC
GAACCGTGGTGGTGTTCGGGGCGGGCAAGCAGGCATACTGGCACATTCGG
CTGGCGCTGATCCTGCGCGGAGAGGGCATCAAACGGGTGTATATTATCAA
CCGATCCTTTGACCGCGCGGCCCAGCTGCTGCGGGATATCTACAGCCCCG
AGAACGCCAGCTGGCGCGGCGATGTGAAATTCTCCGCTGTCAGCACGGAC
TTTGTCGAGTACGACCGCATCCTGCACGATGCGCTGCTCAAGGCAGATGC
GATCTTCTGCTGCACGCCCTCGACGGAACCGCTCTTCCCTGCACAAATCC
TCACATCGCGCGACGGACGCCGAAAGGGCCGTCTGATCAGCGCGATTGGA
TCATATCGGCCACACATGACCGAGCTGCCACCTGAGTTGCTGCGCGACGA
GGTGACGGTGCACAGCTCGCATCGGCATTTCCACAAGCATGTGCGACGGA
GTGGCGTAGTGGTGGTGGACAGTTTGGATGCGGCGCTGAAGGAAGCCGGC
GAGATTGTGCAGGCGGGCATCCGGCCGCATCAGGTGGTGGAATTGGGCGA
GCTGCTGATTGTGCGGGATGCGTCGCGCGGGGAGGGCGACAACAGCGAAG
ATGGCAAGAGTCTTCGGGATTGGGTGGAGCGCGGGAATGTGATCTTCAAG
AGCGTGGGGATGGGCTTGATGGATCTGGTGACGGGCGGCGATCTGGTGCG
GTTGGCGCGGGAGAAGGGAGTGGGCACGACGCTGGAGGAATTCTGATTGC
TTTCTTTCTTTTCTTTCTTTCTTTTCATGTAGTAATTACTGGAGAACTAT
CACGATGCGGGCACCGGGAAGCAGGTAATTGCTGGACTATGATATCCATA
TTCAATTCATGCTACTTTTATCTTTCT back to topCoding sequence (CDS) from alignment at ch7:2339056..2341182- >KJC3_010100-T1 ID=KJC3_010100-T1|Name=KJC3_010100-T1|organism=Aspergillus niger KJC3|type=CDS|length=1422bp|location=Sequence derived from alignment at ch7:2339056..2341182- (Aspergillus niger KJC3)
ATGCCACTCACCATCCTCTCTCAAACACAACTCCGCTCCCTCCTCCTGTC
GCTCTCTCGCGACCAGATCATTGAGCTCCAGCAGAACCTCTCCAATGCTC
TGCGGGACTACTCCACTGGTAGCCAAGAAAAGGGCTGTGCGGCTGCCTAC
CAACCCACGCGCACGGCCATCACCCGTCAGAATGGCTGCACCACCTTGTT
CATGCCCGCTAGCACGGGCAACACCCTGGGCATGAAGATGATCTCCTTAC
AAGATAACAGTCAGGCCGGCTGCTCCGTCGACCCAGCCTTAGACTTGTCC
TCCGCAGCCTCCCGGACCACCACCACCTCCTCCTCCAGCCGAGTCAACCA
GCGCAAGTCCATGTCCTCCATCTCCTCCGAAGGCAGCGAGCAATCCATGT
CCTCCCAAGAAGACGACGACCACACCTCCTCCTCTCCCTCCTCCAGCAGC
AAATCGCTCACCCCCGGCTGCGTGAACCAGCAACCCATCGATACCGGAAT
GTCCAACACCATGGGTGCCTGGCCCGCCGCCGGCTCCCGTGATACCTCCC
CGCAAGGATCAGTGACATTGATTGACGAGACGAGCCTACCCTTTGGATTG
ATCAACGCTCATGAACTTACCCCCTTTCGCACCGCCTTGACCGCCACCAT
GACCCTCAACAAACGTAAGCGCGTGCGAACCGTGGTGGTGTTCGGGGCGG
GCAAGCAGGCATACTGGCACATTCGGCTGGCGCTGATCCTGCGCGGAGAG
GGCATCAAACGGGTGTATATTATCAACCGATCCTTTGACCGCGCGGCCCA
GCTGCTGCGGGATATCTACAGCCCCGAGAACGCCAGCTGGCGCGGCGATG
TGAAATTCTCCGCTGTCAGCACGGACTTTGTCGAGTACGACCGCATCCTG
CACGATGCGCTGCTCAAGGCAGATGCGATCTTCTGCTGCACGCCCTCGAC
GGAACCGCTCTTCCCTGCACAAATCCTCACATCGCGCGACGGACGCCGAA
AGGGCCGTCTGATCAGCGCGATTGGATCATATCGGCCACACATGACCGAG
CTGCCACCTGAGTTGCTGCGCGACGAGGTGACGGTGCACAGCTCGCATCG
GCATTTCCACAAGCATGTGCGACGGAGTGGCGTAGTGGTGGTGGACAGTT
TGGATGCGGCGCTGAAGGAAGCCGGCGAGATTGTGCAGGCGGGCATCCGG
CCGCATCAGGTGGTGGAATTGGGCGAGCTGCTGATTGTGCGGGATGCGTC
GCGCGGGGAGGGCGACAACAGCGAAGATGGCAAGAGTCTTCGGGATTGGG
TGGAGCGCGGGAATGTGATCTTCAAGAGCGTGGGGATGGGCTTGATGGAT
CTGGTGACGGGCGGCGATCTGGTGCGGTTGGCGCGGGAGAAGGGAGTGGG
CACGACGCTGGAGGAATTCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010100-T1.utr3p1 | KJC3_010100-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010100-T1.utr5p1 | KJC3_010100-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR003462 |
| DBxref | PFAM:PF01488 |
| DBxref | PFAM:PF02423 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2339056..2341182 - |
|
