You are here

KJC3_010107-T1, KJC3_010107-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010107-T1
Unique NameKJC3_010107-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2357467..2358107-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010107-T1 ID=KJC3_010107-T1|Name=KJC3_010107-T1|organism=Aspergillus niger KJC3|type=mRNA|length=641bp|location=Sequence derived from alignment at ch7:2357467..2358107- (Aspergillus niger KJC3)
ATGCCCGGCACTTGCGAGGTTTGCGTCTCGGAGCCTTCGAAGTACCGATG CCCAACATGTGGGCTCATGAGGTATGATTGTGCTCTAAGCCTTTTCTTTT GAGAAGGGAGGAACATACCCGTGCTAATTGCCACCCTCCTAGTTGCTCTC TGGCTTGCACCCAGTCCCATAAAATCTACTGCGCACCTAAAGCACCATCG CCAAAACCGACCGGTCCAACGGTCGACATCCAACAGCCTCCCGGCGAATT GAATGAGCATGCGGCCAGCGAGATAACACCTAAAGCTCAGAATGGCCTCG ATATTAAAGCCTTAGGAAGCTCAACCGAACTCAAAGATTTACTCGATCGG TTCCCTTCGCTTCGTGAGGAGCTGTACGATATCTACAAGACTACTTTGGA AGATGCATGGGTGGAGACACAACGCTTTGGAGGTCGGGGTCGACATCACG GGAGAGGCAAAGGGCCGCACCGTCATAATGGACCGTGGACCCGTGAGAAG GGCTTCAACCGGGGAGTGGGAAGGGTGAGGAGGCTACGGGAAAGATGCGA GGAGGGCCTGGAGACTGGAAAAAAAGCGGAGGGATACGTGCGCTTCATGT CCCTGGTCACTGGTAATGAGCTTCCACGCGAGACCATGTGA
back to top

Coding sequence (CDS) from alignment at ch7:2357467..2358107-

>KJC3_010107-T1 ID=KJC3_010107-T1|Name=KJC3_010107-T1|organism=Aspergillus niger KJC3|type=CDS|length=1140bp|location=Sequence derived from alignment at ch7:2357467..2358107- (Aspergillus niger KJC3)
TTGCTCTCTGGCTTGCACCCAGTCCCATAAAATCTACTGCGCACCTAAAG
CACCATCGCCAAAACCGACCGGTCCAACGGTCGACATCCAACAGCCTCCC
GGCGAATTGAATGAGCATGCGGCCAGCGAGATAACACCTAAAGCTCAGAA
TGGCCTCGATATTAAAGCCTTAGGAAGCTCAACCGAACTCAAAGATTTAC
TCGATCGGTTCCCTTCGCTTCGTGAGGAGCTGTACGATATCTACAAGACT
ACTTTGGAAGATGCATGGGTGGAGACACAACGCTTTGGAGGTCGGGGTCG
ACATCACGGGAGAGGCAAAGGGCCGCACCGTCATAATGGACCGTGGACCC
GTGAGAAGGGCTTCAACCGGGGAGTGGGAAGGGTGAGGAGGCTACGGGAA
AGATGCGAGGAGGGCCTGGAGACTGGAAAAAAAGCGGAGGGATACGTGCG
CTTCATGTCCCTGGTCACTGGTAATGAGCTTCCACGCGAGACCATGTGAA
TGCCCGGCACTTGCGAGGTTTGCGTCTCGGAGCCTTCGAAGTACCGATGC
CCAACATGTGGGCTCATGAGTTGCTCTCTGGCTTGCACCCAGTCCCATAA
AATCTACTGCGCACCTAAAGCACCATCGCCAAAACCGACCGGTCCAACGG
TCGACATCCAACAGCCTCCCGGCGAATTGAATGAGCATGCGGCCAGCGAG
ATAACACCTAAAGCTCAGAATGGCCTCGATATTAAAGCCTTAGGAAGCTC
AACCGAACTCAAAGATTTACTCGATCGGTTCCCTTCGCTTCGTGAGGAGC
TGTACGATATCTACAAGACTACTTTGGAAGATGCATGGGTGGAGACACAA
CGCTTTGGAGGTCGGGGTCGACATCACGGGAGAGGCAAAGGGCCGCACCG
TCATAATGGACCGTGGACCCGTGAGAAGGGCTTCAACCGGGGAGTGGGAA
GGGTGAGGAGGCTACGGGAAAGATGCGAGGAGGGCCTGGAGACTGGAAAA
AAAGCGGAGGGATACGTGCGCTTCATGTCCCTGGTCACTGGTAATGAGCT
TCCACGCGAGACCATGTGAATGCCCGGCACTTGCGAGGTTTGCGTCTCGG
AGCCTTCGAAGTACCGATGCCCAACATGTGGGCTCATGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010107KJC3_010107Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010107-T1KJC3_010107-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010107-T1.cdsKJC3_010107-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010107-T1.exon2KJC3_010107-T1.exon2Aspergillus niger KJC3exon
KJC3_010107-T1.exon1KJC3_010107-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR007529
DBxrefPFAM:PF04438
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2357467..2358107 -