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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2369803..2373398+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010110-T1 ID=KJC3_010110-T1|Name=KJC3_010110-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3596bp|location=Sequence derived from alignment at ch7:2369803..2373398+ (Aspergillus niger KJC3)
CTTCTCTCCGTCTTGCGACGTCCACTTCCCCGCTTTCAAACACTTCATCA
ACACATTCATCTCAGCTCAGCTCCTGTTAAGTCTTTCTCACTCGAGAATT
ACTGACACTTTCATGGCCAGTCTACTTCGCGCCTTGCTATACGCCGTCTT
CCAATTCGTATTACAGACATCATGGCTGCGCCAGCCGGCAAATCTACTGC
GCAGGCGACCAAGCCTGTGACTTCGTCGACTCCGACCAGTAACGTGTCCG
CCAGGCTTGAGAAAACTCACCCTGGCGTTCGCCGGTCCACCCCTGACTCT
GAGGCTTTGGCTTCCTCTGATGACGATGGAGACCATTCACAGCAGGTGGC
AACCTCTACGACCATGCCAGCACCCAAGCCTGCTCGCCGCACGTCATGGC
TAAATGAAGTGCCAGCTACCGCGACCAGAAAGGCATCATTGACCACTAGT
GGTCCCTTGTCCACAGGCGCCTCTAACCCAAGCAGTCCTGCTACCGACCA
ATCTGGATGGCCGAACACGAGCCCCGGTATTGGTAACTCTATTCCCTGGA
ATCACGTAGGGAACAGTTCCTTTCCCTGGGCTGCTGGTATCTGGAATACC
GAGTCTCGGAAGGAGCCTCCACCACGGCTTGCGGAGATCGTCCCATCCCC
GACCATGTCCAATCCTTCTACTGCGAGCAATTACTTTACGGAAGAAATAC
TGAGCCCTACGACTCGTACGACCGCTGGCGACTCGGCCATCCCGTTCTCA
ATTCCTCTGCATCCGACTCCAAAAACCTATCGGTCGCAGTCATACTCGGT
AGGTCAGTTGGATCCTGAGTTCCTGAGCTTCATGGCGAACAAGTCCTCAA
AGCCATACTCTGGCGGCCGTCCTCGTAACGGCAACCAATTCTCCGCCTTA
CAGCATCGGTCATCGCGGCCTAGCCTTCTCGGTGAGCTGGGTCATGACCC
CGCTACTCTTGGACGTGTGCGCGAGGACGATGACGATGACGCTGGCAGCC
CGGATGGTTCGGACGGTAGCTTTAGCAACTATGCAGCCAACCAAGCCCGA
ACCATCGAACAACTTTCGAGGGAAAATGCTCTCCTACGCCAAGCAGCAGG
GCAGATGGACAACTCAATGAGAGATCGTACCATGTCGTCTGCATCCGCAG
CTAGCGGATATGCCATCGGAAGTGGCATCCATAATTTGCACCGTATTCGC
GGCAGTGTCCCCGAGGAGACCGACCTGGCGGTAGAAGATCTTGACGAGGT
TGGCGATATCCCTGGTTACAATAACATTCATAGTAGCGGTCGGAGAAGAC
TCTCTGAGCATTCAGCGAACCTCGAGAAGCAGCTCCCTCCTTACACGTCG
TACCAGAATCGTACCCTGGAAAACGTCCGCAAGGCTCATTGGCAAACCTC
TCTTGACTTTGGTAGCATTGCGGATATCCCTCAGAGTCGGCGCCACTCCT
TTGCGGACATTCCTATGCGACACGCTTCTGTCTCAGGGGAATCCCAGGCA
GCCGCCAGTACTAGAGCTGGAATGGGTGATAGAGAAGAGGATTATGCGAA
CATTGTTGACGGCCCTCTTTCAAATGTTCAAGGCCAGAATCGTGAGTATC
CTCGTTTTCATGTGGCCCCTCGTCCCGAGGAACATGAAATGGAGACGGAG
TATTTACGAGCTCGTCGATTTGCAGAAGCCTATTTTGCTCGCGACCCAGT
TCTCCGCGCCGCAGACGGCCCCGCTTCGATGGCCACGTCCCTCCACCAAG
CATACACGATGCCGAACGCCTACGGCCGCCACCAGCCTGGCCTCGCGCAT
TCGCACCAGAACCAGCTCCTGTATATCGTCACGTTCAAATGCCATCGGGC
GGATGTCTTCTATATCCAGGAAGATACCGGTCTTCAGGTGAAACCCGGTG
ATCTCGTCATCGTCGAAGCGGACCGCGGTACGGATCTTGGCACTATACAG
CACGCTAACGTATCTATGCAAAGAGCCCGGGAGCTGAAACAGCAGTATGC
TGAGGAACATTACAAGTGCTTGATGATGTTCTCTAGACAGGGCCAGAATG
GGGCCGCGAACGTGGTCAATGCTCCTAGTGGTGTACCCGGCTTGAATAAC
AGAAGCGCCATTGGTGGCATGGGTCCACATGGTCCGCATGGGATGCAGGA
CTCTGCTGCCGACATCAAGCCTAAATTGATCAAGAGGCTTGCCCAAAATC
ATGAAATCTTAACTCTACGTGAAAAGGAAGGAAATGAAGCGAAGGCGAAG
CGAGTTTGCCAGCAGAAGGTTACCGAGCATCGACTGAATATGGAAATTCT
CGATGCCGAATTCCAAATGTGAGTTCAAATGTAACGTTCGGCGCACTCAT
TCACCTGCTAACAAGACCTTTTTAATTAGGGACTGGAAGAAGCTCACCTT
CTACTACTTTGCGGATTCCTACATCAATTTCAATTCGCTTGTTACTGATC
TTTTCAAGATCTATAAGACCCGGATTTGGATGTCTGCTATCAATCCAGCT
TCGTTTGTCACGCCTCCCAGCGCTGGCTTGTCGGCCCCAAACCCTCTAGC
TTATAATCACGACGCACAAGCGGATCGCCCACTTGACGGCAGAATCTACG
GTCATCCTCGTGATGCCATGGGCACGGGACGAGACATCGGCGCCAACCAG
ATGGGAATGTTGCGCAATGCCTATGTCGACTCGTATCAGCCGTTCAGCCA
AGCCTCTCGCCAACCAGAGCTAGGTGGACTCGCTTCTGTGGATCCCTTTA
CTCCCTATTCGGCGAACAATTATGGCTCTCTGGATTCGGGATACGTTGAT
TACGGCGCAGGGACGGGCGCAAGCTCCGGACCATCCCGTCTACATGCTGC
CCCGAGCGAATGGATAAACAGCCGTTTCCAGGGGTTGTCCCTGAATTCCT
GAGGAATACCATGCGGTTTCTCTGTACAAATTGATGCAATACCGCTGTAC
ATCGAAAGCAGCTTTTATTTCTTTTTACCCCCTATCATCTTCTTCCGCCG
CCTATGCAAAACCCATTCTCCTGTCTTCCCAACCCCAAGAAGGGACCATC
CGCTCCGCTTTCATGTATTCAGATTTCACATTTCCTACTGTTCTTCTCGT
TGACTTCGCTCTTTTACACTATCACTACATCTCTCTTTTCTAATGTGTTT
CTTACAAGAGATTAGAAATCATGTGCAACGGATCAAAAGGAAAGACTCAT
GACCTGTCGTTAGTGCTGATAATTAATCATAGACTTCAGCTTTGATGGTA
TGAAGGCTTAGGCATGTTCGTCTCGGGCTATGCTGCAAGCAATCAGATCA
TTACCAATTCAATGGATCGGTTTTTTTTTTAAATTGTCTCCTAATTGCTA
ATTGTGTATTATGTTATTGCCGAATCGGCCCATATGTTCCATCTGGGTGA
TTTTGAAGTCTCCGTATATAGGCTTGTCGACATAGGATCAAGGCACCTTG
CACTTTCACGTGGAGCATGTCTGTCAAACTCTCGTTGATCGATACCTGAC
GACAGTATCACTTTCCGTCCGGTTTTGGACGGCGCAAGAGCCATATCTTC
ATAGCCTACAATGATTAGAAAAGATACATTCTTTTTTTTTCTTTTG back to topCoding sequence (CDS) from alignment at ch7:2369803..2373398+ >KJC3_010110-T1 ID=KJC3_010110-T1|Name=KJC3_010110-T1|organism=Aspergillus niger KJC3|type=CDS|length=5340bp|location=Sequence derived from alignment at ch7:2369803..2373398+ (Aspergillus niger KJC3)
ATGGCTGCGCCAGCCGGCAAATCTACTGCGCAGGCGACCAAGCCTGTGAC
TTCGTCGACTCCGACCAGTAACGTGTCCGCCAGGCTTGAGAAAACTCACC
CTGGCGTTCGCCGGTCCACCCCTGACTCTGAGGCTTTGGCTTCCTCTGAT
GACGATGGAGACCATTCACAGCAGGTGGCAACCTCTACGACCATGCCAGC
ACCCAAGCCTGCTCGCCGCACGTCATGGCTAAATGAAGTGCCAGCTACCG
CGACCAGAAAGGCATCATTGACCACTAGTGGTCCCTTGTCCACAGGCGCC
TCTAACCCAAGCAGTCCTGCTACCGACCAATCTGGATGGCCGAACACGAG
CCCCGGTATTGGTAACTCTATTCCCTGGAATCACGTAGGGAACAGTTCCT
TTCCCTGGGCTGCTGGTATCTGGAATACCGAGTCTCGGAAGGAGCCTCCA
CCACGGCTTGCGGAGATCGTCCCATCCCCGACCATGTCCAATCCTTCTAC
TGCGAGCAATTACTTTACGGAAGAAATACTGAGCCCTACGACTCGTACGA
CCGCTGGCGACTCGGCCATCCCGTTCTCAATTCCTCTGCATCCGACTCCA
AAAACCTATCGGTCGCAGTCATACTCGGTAGGTCAGTTGGATCCTGAGTT
CCTGAGCTTCATGGCGAACAAGTCCTCAAAGCCATACTCTGGCGGCCGTC
CTCGTAACGGCAACCAATTCTCCGCCTTACAGCATCGGTCATCGCGGCCT
AGCCTTCTCGGTGAGCTGGGTCATGACCCCGCTACTCTTGGACGTGTGCG
CGAGGACGATGACGATGACGCTGGCAGCCCGGATGGTTCGGACGGTAGCT
TTAGCAACTATGCAGCCAACCAAGCCCGAACCATCGAACAACTTTCGAGG
GAAAATGCTCTCCTACGCCAAGCAGCAGGGCAGATGGACAACTCAATGAG
AGATCGTACCATGTCGTCTGCATCCGCAGCTAGCGGATATGCCATCGGAA
GTGGCATCCATAATTTGCACCGTATTCGCGGCAGTGTCCCCGAGGAGACC
GACCTGGCGGTAGAAGATCTTGACGAGGTTGGCGATATCCCTGGTTACAA
TAACATTCATAGTAGCGGTCGGAGAAGACTCTCTGAGCATTCAGCGAACC
TCGAGAAGCAGCTCCCTCCTTACACGTCGTACCAGAATCGTACCCTGGAA
AACGTCCGCAAGGCTCATTGGCAAACCTCTCTTGACTTTGGTAGCATTGC
GGATATCCCTCAGAGTCGGCGCCACTCCTTTGCGGACATTCCTATGCGAC
ACGCTTCTGTCTCAGGGGAATCCCAGGCAGCCGCCAGTACTAGAGCTGGA
ATGGGTGATAGAGAAGAGGATTATGCGAACATTGTTGACGGCCCTCTTTC
AAATGTTCAAGGCCAGAATCGTGAGTATCCTCGTTTTCATGTGGCCCCTC
GTCCCGAGGAACATGAAATGGAGACGGAGTATTTACGAGCTCGTCGATTT
GCAGAAGCCTATTTTGCTCGCGACCCAGTTCTCCGCGCCGCAGACGGCCC
CGCTTCGATGGCCACGTCCCTCCACCAAGCATACACGATGCCGAACGCCT
ACGGCCGCCACCAGCCTGGCCTCGCGCATTCGCACCAGAACCAGCTCCTG
TATATCGTCACGTTCAAATGCCATCGGGCGGATGTCTTCTATATCCAGGA
AGATACCGGTCTTCAGGTGAAACCCGGTGATCTCGTCATCGTCGAAGCGG
ACCGCGGTACGGATCTTGGCACTATACAGCACGCTAACGTATCTATGCAA
AGAGCCCGGGAGCTGAAACAGCAGTATGCTGAGGAACATTACAAGTGCTT
GATGATGTTCTCTAGACAGGGCCAGAATGGGGCCGCGAACGTGGTCAATG
CTCCTAGTGGTGTACCCGGCTTGAATAACAGAAGCGCCATTGGTGGCATG
GGTCCACATGGTCCGCATGGGATGCAGGACTCTGCTGCCGACATCAAGCC
TAAATTGATCAAGAGGCTTGCCCAAAATCATGAAATCTTAACTCTACGTG
AAAAGGAAGGAAATGAAGCGAAGGCGAAGCGAGTTTGCCAGCAGAAGGTT
ACCGAGCATCGACTGAATATGGAAATTCTCGATGCCGAATTCCAAATGGA
CTGGAAGAAGCTCACCTTCTACTACTTTGCGGATTCCTACATCAATTTCA
ATTCGCTTGTTACTGATCTTTTCAAGATCTATAAGACCCGGATTTGGATG
TCTGCTATCAATCCAGCTTCGTTTGTCACGCCTCCCAGCGCTGGCTTGTC
GGCCCCAAACCCTCTAGCTTATAATCACGACGCACAAGCGGATCGCCCAC
TTGACGGCAGAATCTACGGTCATCCTCGTGATGCCATGGGCACGGGACGA
GACATCGGCGCCAACCAGATGGGAATGTTGCGCAATGCCTATGTCGACTC
GTATCAGCCGTTCAGCCAAGCCTCTCGCCAACCAGAGCTAGGTGGACTCG
CTTCTGTGGATCCCTTTACTCCCTATTCGGCGAACAATTATGGCTCTCTG
GATTCGGGATACGTTGATTACGGCGCAGGGACGGGCGCAAGCTCCGGACC
ATCCCGTCTACATGCTGCCCCGAGCGAATGGATAAACAGCCGTTTCCAGG
GGTTGTCCCTGAATTCCTGAATGGCTGCGCCAGCCGGCAAATCTACTGCG
CAGGCGACCAAGCCTGTGACTTCGTCGACTCCGACCAGTAACGTGTCCGC
CAGGCTTGAGAAAACTCACCCTGGCGTTCGCCGGTCCACCCCTGACTCTG
AGGCTTTGGCTTCCTCTGATGACGATGGAGACCATTCACAGCAGGTGGCA
ACCTCTACGACCATGCCAGCACCCAAGCCTGCTCGCCGCACGTCATGGCT
AAATGAAGTGCCAGCTACCGCGACCAGAAAGGCATCATTGACCACTAGTG
GTCCCTTGTCCACAGGCGCCTCTAACCCAAGCAGTCCTGCTACCGACCAA
TCTGGATGGCCGAACACGAGCCCCGGTATTGGTAACTCTATTCCCTGGAA
TCACGTAGGGAACAGTTCCTTTCCCTGGGCTGCTGGTATCTGGAATACCG
AGTCTCGGAAGGAGCCTCCACCACGGCTTGCGGAGATCGTCCCATCCCCG
ACCATGTCCAATCCTTCTACTGCGAGCAATTACTTTACGGAAGAAATACT
GAGCCCTACGACTCGTACGACCGCTGGCGACTCGGCCATCCCGTTCTCAA
TTCCTCTGCATCCGACTCCAAAAACCTATCGGTCGCAGTCATACTCGGTA
GGTCAGTTGGATCCTGAGTTCCTGAGCTTCATGGCGAACAAGTCCTCAAA
GCCATACTCTGGCGGCCGTCCTCGTAACGGCAACCAATTCTCCGCCTTAC
AGCATCGGTCATCGCGGCCTAGCCTTCTCGGTGAGCTGGGTCATGACCCC
GCTACTCTTGGACGTGTGCGCGAGGACGATGACGATGACGCTGGCAGCCC
GGATGGTTCGGACGGTAGCTTTAGCAACTATGCAGCCAACCAAGCCCGAA
CCATCGAACAACTTTCGAGGGAAAATGCTCTCCTACGCCAAGCAGCAGGG
CAGATGGACAACTCAATGAGAGATCGTACCATGTCGTCTGCATCCGCAGC
TAGCGGATATGCCATCGGAAGTGGCATCCATAATTTGCACCGTATTCGCG
GCAGTGTCCCCGAGGAGACCGACCTGGCGGTAGAAGATCTTGACGAGGTT
GGCGATATCCCTGGTTACAATAACATTCATAGTAGCGGTCGGAGAAGACT
CTCTGAGCATTCAGCGAACCTCGAGAAGCAGCTCCCTCCTTACACGTCGT
ACCAGAATCGTACCCTGGAAAACGTCCGCAAGGCTCATTGGCAAACCTCT
CTTGACTTTGGTAGCATTGCGGATATCCCTCAGAGTCGGCGCCACTCCTT
TGCGGACATTCCTATGCGACACGCTTCTGTCTCAGGGGAATCCCAGGCAG
CCGCCAGTACTAGAGCTGGAATGGGTGATAGAGAAGAGGATTATGCGAAC
ATTGTTGACGGCCCTCTTTCAAATGTTCAAGGCCAGAATCGTGAGTATCC
TCGTTTTCATGTGGCCCCTCGTCCCGAGGAACATGAAATGGAGACGGAGT
ATTTACGAGCTCGTCGATTTGCAGAAGCCTATTTTGCTCGCGACCCAGTT
CTCCGCGCCGCAGACGGCCCCGCTTCGATGGCCACGTCCCTCCACCAAGC
ATACACGATGCCGAACGCCTACGGCCGCCACCAGCCTGGCCTCGCGCATT
CGCACCAGAACCAGCTCCTGTATATCGTCACGTTCAAATGCCATCGGGCG
GATGTCTTCTATATCCAGGAAGATACCGGTCTTCAGGTGAAACCCGGTGA
TCTCGTCATCGTCGAAGCGGACCGCGGTACGGATCTTGGCACTATACAGC
ACGCTAACGTATCTATGCAAAGAGCCCGGGAGCTGAAACAGCAGTATGCT
GAGGAACATTACAAGTGCTTGATGATGTTCTCTAGACAGGGCCAGAATGG
GGCCGCGAACGTGGTCAATGCTCCTAGTGGTGTACCCGGCTTGAATAACA
GAAGCGCCATTGGTGGCATGGGTCCACATGGTCCGCATGGGATGCAGGAC
TCTGCTGCCGACATCAAGCCTAAATTGATCAAGAGGCTTGCCCAAAATCA
TGAAATCTTAACTCTACGTGAAAAGGAAGGAAATGAAGCGAAGGCGAAGC
GAGTTTGCCAGCAGAAGGTTACCGAGCATCGACTGAATATGGAAATTCTC
GATGCCGAATTCCAAATGGACTGGAAGAAGCTCACCTTCTACTACTTTGC
GGATTCCTACATCAATTTCAATTCGCTTGTTACTGATCTTTTCAAGATCT
ATAAGACCCGGATTTGGATGTCTGCTATCAATCCAGCTTCGTTTGTCACG
CCTCCCAGCGCTGGCTTGTCGGCCCCAAACCCTCTAGCTTATAATCACGA
CGCACAAGCGGATCGCCCACTTGACGGCAGAATCTACGGTCATCCTCGTG
ATGCCATGGGCACGGGACGAGACATCGGCGCCAACCAGATGGGAATGTTG
CGCAATGCCTATGTCGACTCGTATCAGCCGTTCAGCCAAGCCTCTCGCCA
ACCAGAGCTAGGTGGACTCGCTTCTGTGGATCCCTTTACTCCCTATTCGG
CGAACAATTATGGCTCTCTGGATTCGGGATACGTTGATTACGGCGCAGGG
ACGGGCGCAAGCTCCGGACCATCCCGTCTACATGCTGCCCCGAGCGAATG
GATAAACAGCCGTTTCCAGGGGTTGTCCCTGAATTCCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010110-T1.utr5p1 | KJC3_010110-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010110-T1.utr3p1 | KJC3_010110-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007557 |
| DBxref | PFAM:PF04468 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2369803..2373398 + |
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