|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2386962..2389626+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010116-T1 ID=KJC3_010116-T1|Name=KJC3_010116-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2665bp|location=Sequence derived from alignment at ch7:2386962..2389626+ (Aspergillus niger KJC3)
GATCAATCAGACTACTACTCAATTGAAACGGTGCTGAGCTTGTCTGCAAA
GGCAGGAACGATAACTCTGAATCTGCGTGCTTGACTGAGCGCGGTGACTG
CAGGCCCTCGATCCGAGCATGAACACCATGAGCTATTAGTTCACGCGATT
CCAGACCACATCAGACTAGCAACTCCTCCGCGCATCGCATACCGTCAACA
GCTTCCTGCCAGATCCACACCTCAAACATGCCCTCCGCAAACAAAGGCAA
AGGCAAAGGCCGCGAAGCTCGCCCCTCCCGAAGTCGCAACACTACCCCAA
ACTCCAGCTTCAGCGCCGGCCCGACCGCCTCCGCCCCGCTCCACAGCTAC
CTCGACAATGATGTCTCCAAGTTGATGATGACCGGCTCGACCATCCAGTA
TGGAGAACTACTTGAGCGCATGGGCGGAGTTGGCCCGATCCCCGATTCCA
AGTCACTCGAGTTGTTGATGGAACACCTCAAGACTTTGAGCCAGCTAGCC
GAAACGCGAGGCGACGCATGCAATGCCGGCATCAGAGAGCTATCACAGAA
GCGTAAGGAGGTCGTCGAAGAGCAGGAGTCAGCTGAGCGGGAAGGGGCTG
ATCGAGTGAAGATGAAGCGAGAAGCCGATGACGAGGAGGAAGAGAAGGTA
CTGAAGGGAGGCAAGCTGAAGAGGCGCAAGGAACGCGGGAGCAGTTCCAA
GGAGGAACGCCCGCTGACTCACGGTGCCCATGATGTTGCGCGACAGGACG
GTGCTGAGACCAAGGTTGAAGGAGGTGAGTCTATCATTCGCCGTTTTGCG
ATGAAGCGTTGCTACTTGAGCCTTTACATCCTGCCCATCCATTCCTGCCA
TGCTAATTCATGCAGCCGCATCACCAGCTTCCAAAAAGTCCAAGAACGCT
GCTTCCGAAGAGGCATCATCTTTATCCCCCCCATTGCGAAAGTCCCCCCA
GCCAGCTGCCGATGAAGACGCCGAGGATGCAGGGTCGCCTGGGTCGGACG
ATAGCTCTGATTCACACCAACCTGAGCCCGCGCCGGCCGTGCCACAGGTG
CAAGTGTTCGGTCCCAACCCGCTCAAATTTGACGACCCAACCATATATCA
CATCCGGGAAGTTACTCCAGACATGACCGATGAGGAGAAAAAGGCCATCT
ACAGCGTCGCCCGCTTCCCCTGGAGTGATTTGAGCCATCTGATGGCGGGC
TCCCCTCCGGATCGAGACTTCAGCAGCTCCAAGCCCGCGAGTCAAGTCAA
CGCCAATACGTTCCTAGCCTATATCGATCCATACGTCCGCCCGTTGACGG
AAGAAGACATAGCGTTTCTCAAAGAGAAGGTGAGCCTTCCGGTCGATCTC
GCTACGACCTAGCGCTAACAGACCCAGGGCGATCGCACGACCCCGTTCAT
CATGCCTCGACGCGGAAAGAAACACTACACCGACGTATGGGCTGAGGACG
ACGGACTCATGAATGTTGACCAGCCCAACGGCGATAAAGAGCGGCTACCG
CTCAACCAAGGCAGAGGAAACATCGACCAAGTGACCGACGAGACGGTCGA
AACCGACAAAGTCTCCGTCGGCCCTCTAGTCAGCCGACTCTACTCACTAC
TCCGCTACGAGCATCGAGCTCTCCCCGATGAAACCGCCCCCAACGCCAAC
GGCTCCGTCAACGGCGACATGGCGAACGGGCCCATGAACCCCGACTCCAT
GGACATCGACCACCCAACCGGCGAAGCCTCCAACGAAACCAAACCCCTCC
CCTCCGCAACCGCCTTCCCCGACTCCTCCCCGAACAACTTCAAAGTCCCC
GCCGCAAAGCTCGACCACGCCCAGCTAGACGAGCGTCTGAAAGCCGAACT
CCGCCACGTCGGCTTCCTCGGCCCAGACGACAACCCAGACTACGACGCCC
ACTACGACGATGACATCGCCCAACGCCTGCGTCTCCTCCAAAGCGAACTC
AAAAAGCAAATGATCATCAACAGCGCCCGCAAAACCCGTCTCCTCGACAT
CGCCCGCGAACGCATGGCCTACCAGGAGTACATGACCATCCACGACGACT
TGGACTCCCAGGTCCAGCAGGCCTACCTAAAACGCACCCGCACCCTTGGA
AAAAGCAAAAAGGGCTCCCAGGCCAAACACCGTCCCGGTGGCGCCGGCGG
CGGCAGCCATGTCGTCAGTGCTGCAGGTGTTGGCCGCCCCGCGATTGGTG
ATGTTGCCCGGACGCTTATGGATCGACGTAAGCGGTGGCGCGATTGTATC
GGACTTGTCTTCAAGGATAGCAAGACTAGTGTGCCTGGGAAAAATGAGTC
GGTCTTCGAGCCGTCTTTGATGGCTGAGATTGAGAAGGCCGAGGTGGAAG
GGTGGGATGAGGAACAGGATTGATCGATCGATCGAAACCTGTTACCATTC
TGCCCGATTATCCCGGTTTCTGATTCGATGTACATATTGTGGTTCTTTTT
CTGGCTTCCTTATTTGGCTGATATCTTAGCGACGGTTGAGTAGGTGATCT
ACCCTTTGGTTTAATTTTGGGTTTAAGGCGTTGAGGAAGGATGACTGGAT
GGATGGATGGATATGATCGGGACGTTTTCCAAGACGTAAATATAGCCAGC
ATATCAGCTGGGAAGATCTCTGGATTCATATATACAGAATAGGTATTAAC
GAGGACTATTAGCAC back to topCoding sequence (CDS) from alignment at ch7:2386962..2389626+ >KJC3_010116-T1 ID=KJC3_010116-T1|Name=KJC3_010116-T1|organism=Aspergillus niger KJC3|type=CDS|length=6021bp|location=Sequence derived from alignment at ch7:2386962..2389626+ (Aspergillus niger KJC3)
ATGCCCTCCGCAAACAAAGGCAAAGGCAAAGGCCGCGAAGCTCGCCCCTC
CCGAAGTCGCAACACTACCCCAAACTCCAGCTTCAGCGCCGGCCCGACCG
CCTCCGCCCCGCTCCACAGCTACCTCGACAATGATGTCTCCAAGTTGATG
ATGACCGGCTCGACCATCCAGTATGGAGAACTACTTGAGCGCATGGGCGG
AGTTGGCCCGATCCCCGATTCCAAGTCACTCGAGTTGTTGATGGAACACC
TCAAGACTTTGAGCCAGCTAGCCGAAACGCGAGGCGACGCATGCAATGCC
GGCATCAGAGAGCTATCACAGAAGCGTAAGGAGGTCGTCGAAGAGCAGGA
GTCAGCTGAGCGGGAAGGGGCTGATCGAGTGAAGATGAAGCGAGAAGCCG
ATGACGAGGAGGAAGAGAAGGTACTGAAGGGAGGCAAGCTGAAGAGGCGC
AAGGAACGCGGGAGCAGTTCCAAGGAGGAACGCCCGCTGACTCACGGTGC
CCATGATGTTGCGCGACAGGACGGTGCTGAGACCAAGGTTGAAGGAGCCG
CATCACCAGCTTCCAAAAAGTCCAAGAACGCTGCTTCCGAAGAGGCATCA
TCTTTATCCCCCCCATTGCGAAAGTCCCCCCAGCCAGCTGCCGATGAAGA
CGCCGAGGATGCAGGGTCGCCTGGGTCGGACGATAGCTCTGATTCACACC
AACCTGAGCCCGCGCCGGCCGTGCCACAGGTGCAAGTGTTCGGTCCCAAC
CCGCTCAAATTTGACGACCCAACCATATATCACATCCGGGAAGTTACTCC
AGACATGACCGATGAGGAGAAAAAGGCCATCTACAGCGTCGCCCGCTTCC
CCTGGAGTGATTTGAGCCATCTGATGGCGGGCTCCCCTCCGGATCGAGAC
TTCAGCAGCTCCAAGCCCGCGAGTCAAGTCAACGCCAATACGTTCCTAGC
CTATATCGATCCATACGTCCGCCCGTTGACGGAAGAAGACATAGCGTTTC
TCAAAGAGAAGGGCGATCGCACGACCCCGTTCATCATGCCTCGACGCGGA
AAGAAACACTACACCGACGTATGGGCTGAGGACGACGGACTCATGAATGT
TGACCAGCCCAACGGCGATAAAGAGCGGCTACCGCTCAACCAAGGCAGAG
GAAACATCGACCAAGTGACCGACGAGACGGTCGAAACCGACAAAGTCTCC
GTCGGCCCTCTAGTCAGCCGACTCTACTCACTACTCCGCTACGAGCATCG
AGCTCTCCCCGATGAAACCGCCCCCAACGCCAACGGCTCCGTCAACGGCG
ACATGGCGAACGGGCCCATGAACCCCGACTCCATGGACATCGACCACCCA
ACCGGCGAAGCCTCCAACGAAACCAAACCCCTCCCCTCCGCAACCGCCTT
CCCCGACTCCTCCCCGAACAACTTCAAAGTCCCCGCCGCAAAGCTCGACC
ACGCCCAGCTAGACGAGCGTCTGAAAGCCGAACTCCGCCACGTCGGCTTC
CTCGGCCCAGACGACAACCCAGACTACGACGCCCACTACGACGATGACAT
CGCCCAACGCCTGCGTCTCCTCCAAAGCGAACTCAAAAAGCAAATGATCA
TCAACAGCGCCCGCAAAACCCGTCTCCTCGACATCGCCCGCGAACGCATG
GCCTACCAGGAGTACATGACCATCCACGACGACTTGGACTCCCAGGTCCA
GCAGGCCTACCTAAAACGCACCCGCACCCTTGGAAAAAGCAAAAAGGGCT
CCCAGGCCAAACACCGTCCCGGTGGCGCCGGCGGCGGCAGCCATGTCGTC
AGTGCTGCAGGTGTTGGCCGCCCCGCGATTGGTGATGTTGCCCGGACGCT
TATGGATCGACGTAAGCGGTGGCGCGATTGTATCGGACTTGTCTTCAAGG
ATAGCAAGACTAGTGTGCCTGGGAAAAATGAGTCGGTCTTCGAGCCGTCT
TTGATGGCTGAGATTGAGAAGGCCGAGGTGGAAGGGTGGGATGAGGAACA
GGATTGAATGCCCTCCGCAAACAAAGGCAAAGGCAAAGGCCGCGAAGCTC
GCCCCTCCCGAAGTCGCAACACTACCCCAAACTCCAGCTTCAGCGCCGGC
CCGACCGCCTCCGCCCCGCTCCACAGCTACCTCGACAATGATGTCTCCAA
GTTGATGATGACCGGCTCGACCATCCAGTATGGAGAACTACTTGAGCGCA
TGGGCGGAGTTGGCCCGATCCCCGATTCCAAGTCACTCGAGTTGTTGATG
GAACACCTCAAGACTTTGAGCCAGCTAGCCGAAACGCGAGGCGACGCATG
CAATGCCGGCATCAGAGAGCTATCACAGAAGCGTAAGGAGGTCGTCGAAG
AGCAGGAGTCAGCTGAGCGGGAAGGGGCTGATCGAGTGAAGATGAAGCGA
GAAGCCGATGACGAGGAGGAAGAGAAGGTACTGAAGGGAGGCAAGCTGAA
GAGGCGCAAGGAACGCGGGAGCAGTTCCAAGGAGGAACGCCCGCTGACTC
ACGGTGCCCATGATGTTGCGCGACAGGACGGTGCTGAGACCAAGGTTGAA
GGAGCCGCATCACCAGCTTCCAAAAAGTCCAAGAACGCTGCTTCCGAAGA
GGCATCATCTTTATCCCCCCCATTGCGAAAGTCCCCCCAGCCAGCTGCCG
ATGAAGACGCCGAGGATGCAGGGTCGCCTGGGTCGGACGATAGCTCTGAT
TCACACCAACCTGAGCCCGCGCCGGCCGTGCCACAGGTGCAAGTGTTCGG
TCCCAACCCGCTCAAATTTGACGACCCAACCATATATCACATCCGGGAAG
TTACTCCAGACATGACCGATGAGGAGAAAAAGGCCATCTACAGCGTCGCC
CGCTTCCCCTGGAGTGATTTGAGCCATCTGATGGCGGGCTCCCCTCCGGA
TCGAGACTTCAGCAGCTCCAAGCCCGCGAGTCAAGTCAACGCCAATACGT
TCCTAGCCTATATCGATCCATACGTCCGCCCGTTGACGGAAGAAGACATA
GCGTTTCTCAAAGAGAAGGGCGATCGCACGACCCCGTTCATCATGCCTCG
ACGCGGAAAGAAACACTACACCGACGTATGGGCTGAGGACGACGGACTCA
TGAATGTTGACCAGCCCAACGGCGATAAAGAGCGGCTACCGCTCAACCAA
GGCAGAGGAAACATCGACCAAGTGACCGACGAGACGGTCGAAACCGACAA
AGTCTCCGTCGGCCCTCTAGTCAGCCGACTCTACTCACTACTCCGCTACG
AGCATCGAGCTCTCCCCGATGAAACCGCCCCCAACGCCAACGGCTCCGTC
AACGGCGACATGGCGAACGGGCCCATGAACCCCGACTCCATGGACATCGA
CCACCCAACCGGCGAAGCCTCCAACGAAACCAAACCCCTCCCCTCCGCAA
CCGCCTTCCCCGACTCCTCCCCGAACAACTTCAAAGTCCCCGCCGCAAAG
CTCGACCACGCCCAGCTAGACGAGCGTCTGAAAGCCGAACTCCGCCACGT
CGGCTTCCTCGGCCCAGACGACAACCCAGACTACGACGCCCACTACGACG
ATGACATCGCCCAACGCCTGCGTCTCCTCCAAAGCGAACTCAAAAAGCAA
ATGATCATCAACAGCGCCCGCAAAACCCGTCTCCTCGACATCGCCCGCGA
ACGCATGGCCTACCAGGAGTACATGACCATCCACGACGACTTGGACTCCC
AGGTCCAGCAGGCCTACCTAAAACGCACCCGCACCCTTGGAAAAAGCAAA
AAGGGCTCCCAGGCCAAACACCGTCCCGGTGGCGCCGGCGGCGGCAGCCA
TGTCGTCAGTGCTGCAGGTGTTGGCCGCCCCGCGATTGGTGATGTTGCCC
GGACGCTTATGGATCGACGTAAGCGGTGGCGCGATTGTATCGGACTTGTC
TTCAAGGATAGCAAGACTAGTGTGCCTGGGAAAAATGAGTCGGTCTTCGA
GCCGTCTTTGATGGCTGAGATTGAGAAGGCCGAGGTGGAAGGGTGGGATG
AGGAACAGGATTGAATGCCCTCCGCAAACAAAGGCAAAGGCAAAGGCCGC
GAAGCTCGCCCCTCCCGAAGTCGCAACACTACCCCAAACTCCAGCTTCAG
CGCCGGCCCGACCGCCTCCGCCCCGCTCCACAGCTACCTCGACAATGATG
TCTCCAAGTTGATGATGACCGGCTCGACCATCCAGTATGGAGAACTACTT
GAGCGCATGGGCGGAGTTGGCCCGATCCCCGATTCCAAGTCACTCGAGTT
GTTGATGGAACACCTCAAGACTTTGAGCCAGCTAGCCGAAACGCGAGGCG
ACGCATGCAATGCCGGCATCAGAGAGCTATCACAGAAGCGTAAGGAGGTC
GTCGAAGAGCAGGAGTCAGCTGAGCGGGAAGGGGCTGATCGAGTGAAGAT
GAAGCGAGAAGCCGATGACGAGGAGGAAGAGAAGGTACTGAAGGGAGGCA
AGCTGAAGAGGCGCAAGGAACGCGGGAGCAGTTCCAAGGAGGAACGCCCG
CTGACTCACGGTGCCCATGATGTTGCGCGACAGGACGGTGCTGAGACCAA
GGTTGAAGGAGCCGCATCACCAGCTTCCAAAAAGTCCAAGAACGCTGCTT
CCGAAGAGGCATCATCTTTATCCCCCCCATTGCGAAAGTCCCCCCAGCCA
GCTGCCGATGAAGACGCCGAGGATGCAGGGTCGCCTGGGTCGGACGATAG
CTCTGATTCACACCAACCTGAGCCCGCGCCGGCCGTGCCACAGGTGCAAG
TGTTCGGTCCCAACCCGCTCAAATTTGACGACCCAACCATATATCACATC
CGGGAAGTTACTCCAGACATGACCGATGAGGAGAAAAAGGCCATCTACAG
CGTCGCCCGCTTCCCCTGGAGTGATTTGAGCCATCTGATGGCGGGCTCCC
CTCCGGATCGAGACTTCAGCAGCTCCAAGCCCGCGAGTCAAGTCAACGCC
AATACGTTCCTAGCCTATATCGATCCATACGTCCGCCCGTTGACGGAAGA
AGACATAGCGTTTCTCAAAGAGAAGGGCGATCGCACGACCCCGTTCATCA
TGCCTCGACGCGGAAAGAAACACTACACCGACGTATGGGCTGAGGACGAC
GGACTCATGAATGTTGACCAGCCCAACGGCGATAAAGAGCGGCTACCGCT
CAACCAAGGCAGAGGAAACATCGACCAAGTGACCGACGAGACGGTCGAAA
CCGACAAAGTCTCCGTCGGCCCTCTAGTCAGCCGACTCTACTCACTACTC
CGCTACGAGCATCGAGCTCTCCCCGATGAAACCGCCCCCAACGCCAACGG
CTCCGTCAACGGCGACATGGCGAACGGGCCCATGAACCCCGACTCCATGG
ACATCGACCACCCAACCGGCGAAGCCTCCAACGAAACCAAACCCCTCCCC
TCCGCAACCGCCTTCCCCGACTCCTCCCCGAACAACTTCAAAGTCCCCGC
CGCAAAGCTCGACCACGCCCAGCTAGACGAGCGTCTGAAAGCCGAACTCC
GCCACGTCGGCTTCCTCGGCCCAGACGACAACCCAGACTACGACGCCCAC
TACGACGATGACATCGCCCAACGCCTGCGTCTCCTCCAAAGCGAACTCAA
AAAGCAAATGATCATCAACAGCGCCCGCAAAACCCGTCTCCTCGACATCG
CCCGCGAACGCATGGCCTACCAGGAGTACATGACCATCCACGACGACTTG
GACTCCCAGGTCCAGCAGGCCTACCTAAAACGCACCCGCACCCTTGGAAA
AAGCAAAAAGGGCTCCCAGGCCAAACACCGTCCCGGTGGCGCCGGCGGCG
GCAGCCATGTCGTCAGTGCTGCAGGTGTTGGCCGCCCCGCGATTGGTGAT
GTTGCCCGGACGCTTATGGATCGACGTAAGCGGTGGCGCGATTGTATCGG
ACTTGTCTTCAAGGATAGCAAGACTAGTGTGCCTGGGAAAAATGAGTCGG
TCTTCGAGCCGTCTTTGATGGCTGAGATTGAGAAGGCCGAGGTGGAAGGG
TGGGATGAGGAACAGGATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010116-T1.utr5p1 | KJC3_010116-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010116-T1.utr3p1 | KJC3_010116-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261EMF |
| DBxref | InterPro:IPR019340 |
| DBxref | PFAM:PF10198 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2386962..2389626 + |
|
