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KJC3_010125-T1, KJC3_010125-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010125-T1
Unique NameKJC3_010125-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2411298..2412497-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010125-T1 ID=KJC3_010125-T1|Name=KJC3_010125-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1200bp|location=Sequence derived from alignment at ch7:2411298..2412497- (Aspergillus niger KJC3)
ATGCTATCCCAACAGCAACAACCACAGCAACAGCAGGGCCTCCATCGCCC
TAGCCCCAGAGTACTCTCCACAAAACGCCTACATTCCCACCACCCAGACA
GCATCTCCTCCAGATACCGAGCCGGAAAAGCCAAACCCCGGTCTCGCGAA
CAATCTGTCGTCGCATCACGACGTCTCCATCGCAGCAGACACACCCCTGA
CACACCCCCAGATGGAAGGTTCTACATCCTTTCCCTATCAAACCCTCAGT
AAAAGAAAGGCACCCACTAACCAGAAGACCCAATTCAACAAAAAATAGCA
ATTCCTCCCTCTCGCAAGGCGTAATAACCCTCACCATTGGCCCAACCAAA
CGCCTCTTCGCAGCACACAAAGACATCCTCTGCGTCTCACCCTACTTCGC
AGCCCTCTGCAATCCTCCCAACAATGATGTCTCCTCCTCTTCCCCCTCTT
CTTCCCCTTCCTCCTCACCAAGCCCTACCGAATCCATGAGACAAATCGAC
CTTCCCGACGAACAACCCGAAATCTTCTCCTGCGTCCTCGAATACCTCTA
CCGCGGCGACTACTACCCCCGTCTTCGCCACGACAAAACCACCAACACAT
GGGACTTGGAAACCACCCCCTCATCGTCTACTAATACCAGAACGACCACT
AATAACAAAGACACCACCGACCCCAACGCCATCATCTTCCACCCAGCGGT
AGGAGCAGAGATCCTCCGCGACACAGCAGTATAGTATGTCAACCCTTTCT
TCCCCAAATTATCATCCAAAATCCCATCCTATTCTGACACAATAAATGTA
CTACATAGCTGCGCAGCCGAGAAATACTCCCTCGAGCATCTCAAGCGCCT
CGCCTTGAAGAAACAAGGCCTCCACTCCAACATCCCCTGCCACATTATCC
TAAGCAGTGCGCGGTACGCATACATGCACACTCCCGATACGGAGAGTAAA
CTGCGGGCGCATTATCTGGCGCTGATTATTCGGAGTCGGGGGACGTTTAA
GCGGAGTGGGACGATGCAGATGGAGATGGAACGTGGAGGGAAGTTGTTTT
TTGATTTGTTTGTGGCGATGTGTAATCATATGGTGAGTTTTAAAAACTTT
CCCCTTTGTCAAAGTGGAGGATGTGTGCGGGGTGGCTAATTCAGATGATT
GACTATAGGATGATCTTGAGGAGGCGGCGAGGGGTGAAGGGGCGTGTTAG
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Coding sequence (CDS) from alignment at ch7:2411298..2412497-

>KJC3_010125-T1 ID=KJC3_010125-T1|Name=KJC3_010125-T1|organism=Aspergillus niger KJC3|type=CDS|length=3876bp|location=Sequence derived from alignment at ch7:2411298..2412497- (Aspergillus niger KJC3)
GATGATCTTGAGGAGGCGGCGAGGGGTGAAGGGGCGTGTTAGCTGCGCAG
CCGAGAAATACTCCCTCGAGCATCTCAAGCGCCTCGCCTTGAAGAAACAA
GGCCTCCACTCCAACATCCCCTGCCACATTATCCTAAGCAGTGCGCGGTA
CGCATACATGCACACTCCCGATACGGAGAGTAAACTGCGGGCGCATTATC
TGGCGCTGATTATTCGGAGTCGGGGGACGTTTAAGCGGAGTGGGACGATG
CAGATGGAGATGGAACGTGGAGGGAAGTTGTTTTTTGATTTGTTTGTGGC
GATGTGTAATCATATGCAATTCCTCCCTCTCGCAAGGCGTAATAACCCTC
ACCATTGGCCCAACCAAACGCCTCTTCGCAGCACACAAAGACATCCTCTG
CGTCTCACCCTACTTCGCAGCCCTCTGCAATCCTCCCAACAATGATGTCT
CCTCCTCTTCCCCCTCTTCTTCCCCTTCCTCCTCACCAAGCCCTACCGAA
TCCATGAGACAAATCGACCTTCCCGACGAACAACCCGAAATCTTCTCCTG
CGTCCTCGAATACCTCTACCGCGGCGACTACTACCCCCGTCTTCGCCACG
ACAAAACCACCAACACATGGGACTTGGAAACCACCCCCTCATCGTCTACT
AATACCAGAACGACCACTAATAACAAAGACACCACCGACCCCAACGCCAT
CATCTTCCACCCAGCGGTAGGAGCAGAGATCCTCCGCGACACAGCAGTAT
AATGCTATCCCAACAGCAACAACCACAGCAACAGCAGGGCCTCCATCGCC
CTAGCCCCAGAGTACTCTCCACAAAACGCCTACATTCCCACCACCCAGAC
AGCATCTCCTCCAGATACCGAGCCGGAAAAGCCAAACCCCGGTCTCGCGA
ACAATCTGTCGTCGCATCACGACGTCTCCATCGCAGCAGACACACCCCTG
ACACACCCCCAGATGGAAGGATGATCTTGAGGAGGCGGCGAGGGGTGAAG
GGGCGTGTTAGCTGCGCAGCCGAGAAATACTCCCTCGAGCATCTCAAGCG
CCTCGCCTTGAAGAAACAAGGCCTCCACTCCAACATCCCCTGCCACATTA
TCCTAAGCAGTGCGCGGTACGCATACATGCACACTCCCGATACGGAGAGT
AAACTGCGGGCGCATTATCTGGCGCTGATTATTCGGAGTCGGGGGACGTT
TAAGCGGAGTGGGACGATGCAGATGGAGATGGAACGTGGAGGGAAGTTGT
TTTTTGATTTGTTTGTGGCGATGTGTAATCATATGCAATTCCTCCCTCTC
GCAAGGCGTAATAACCCTCACCATTGGCCCAACCAAACGCCTCTTCGCAG
CACACAAAGACATCCTCTGCGTCTCACCCTACTTCGCAGCCCTCTGCAAT
CCTCCCAACAATGATGTCTCCTCCTCTTCCCCCTCTTCTTCCCCTTCCTC
CTCACCAAGCCCTACCGAATCCATGAGACAAATCGACCTTCCCGACGAAC
AACCCGAAATCTTCTCCTGCGTCCTCGAATACCTCTACCGCGGCGACTAC
TACCCCCGTCTTCGCCACGACAAAACCACCAACACATGGGACTTGGAAAC
CACCCCCTCATCGTCTACTAATACCAGAACGACCACTAATAACAAAGACA
CCACCGACCCCAACGCCATCATCTTCCACCCAGCGGTAGGAGCAGAGATC
CTCCGCGACACAGCAGTATAATGCTATCCCAACAGCAACAACCACAGCAA
CAGCAGGGCCTCCATCGCCCTAGCCCCAGAGTACTCTCCACAAAACGCCT
ACATTCCCACCACCCAGACAGCATCTCCTCCAGATACCGAGCCGGAAAAG
CCAAACCCCGGTCTCGCGAACAATCTGTCGTCGCATCACGACGTCTCCAT
CGCAGCAGACACACCCCTGACACACCCCCAGATGGAAGGATGATCTTGAG
GAGGCGGCGAGGGGTGAAGGGGCGTGTTAGCTGCGCAGCCGAGAAATACT
CCCTCGAGCATCTCAAGCGCCTCGCCTTGAAGAAACAAGGCCTCCACTCC
AACATCCCCTGCCACATTATCCTAAGCAGTGCGCGGTACGCATACATGCA
CACTCCCGATACGGAGAGTAAACTGCGGGCGCATTATCTGGCGCTGATTA
TTCGGAGTCGGGGGACGTTTAAGCGGAGTGGGACGATGCAGATGGAGATG
GAACGTGGAGGGAAGTTGTTTTTTGATTTGTTTGTGGCGATGTGTAATCA
TATGCAATTCCTCCCTCTCGCAAGGCGTAATAACCCTCACCATTGGCCCA
ACCAAACGCCTCTTCGCAGCACACAAAGACATCCTCTGCGTCTCACCCTA
CTTCGCAGCCCTCTGCAATCCTCCCAACAATGATGTCTCCTCCTCTTCCC
CCTCTTCTTCCCCTTCCTCCTCACCAAGCCCTACCGAATCCATGAGACAA
ATCGACCTTCCCGACGAACAACCCGAAATCTTCTCCTGCGTCCTCGAATA
CCTCTACCGCGGCGACTACTACCCCCGTCTTCGCCACGACAAAACCACCA
ACACATGGGACTTGGAAACCACCCCCTCATCGTCTACTAATACCAGAACG
ACCACTAATAACAAAGACACCACCGACCCCAACGCCATCATCTTCCACCC
AGCGGTAGGAGCAGAGATCCTCCGCGACACAGCAGTATAATGCTATCCCA
ACAGCAACAACCACAGCAACAGCAGGGCCTCCATCGCCCTAGCCCCAGAG
TACTCTCCACAAAACGCCTACATTCCCACCACCCAGACAGCATCTCCTCC
AGATACCGAGCCGGAAAAGCCAAACCCCGGTCTCGCGAACAATCTGTCGT
CGCATCACGACGTCTCCATCGCAGCAGACACACCCCTGACACACCCCCAG
ATGGAAGGATGATCTTGAGGAGGCGGCGAGGGGTGAAGGGGCGTGTTAGC
TGCGCAGCCGAGAAATACTCCCTCGAGCATCTCAAGCGCCTCGCCTTGAA
GAAACAAGGCCTCCACTCCAACATCCCCTGCCACATTATCCTAAGCAGTG
CGCGGTACGCATACATGCACACTCCCGATACGGAGAGTAAACTGCGGGCG
CATTATCTGGCGCTGATTATTCGGAGTCGGGGGACGTTTAAGCGGAGTGG
GACGATGCAGATGGAGATGGAACGTGGAGGGAAGTTGTTTTTTGATTTGT
TTGTGGCGATGTGTAATCATATGCAATTCCTCCCTCTCGCAAGGCGTAAT
AACCCTCACCATTGGCCCAACCAAACGCCTCTTCGCAGCACACAAAGACA
TCCTCTGCGTCTCACCCTACTTCGCAGCCCTCTGCAATCCTCCCAACAAT
GATGTCTCCTCCTCTTCCCCCTCTTCTTCCCCTTCCTCCTCACCAAGCCC
TACCGAATCCATGAGACAAATCGACCTTCCCGACGAACAACCCGAAATCT
TCTCCTGCGTCCTCGAATACCTCTACCGCGGCGACTACTACCCCCGTCTT
CGCCACGACAAAACCACCAACACATGGGACTTGGAAACCACCCCCTCATC
GTCTACTAATACCAGAACGACCACTAATAACAAAGACACCACCGACCCCA
ACGCCATCATCTTCCACCCAGCGGTAGGAGCAGAGATCCTCCGCGACACA
GCAGTATAATGCTATCCCAACAGCAACAACCACAGCAACAGCAGGGCCTC
CATCGCCCTAGCCCCAGAGTACTCTCCACAAAACGCCTACATTCCCACCA
CCCAGACAGCATCTCCTCCAGATACCGAGCCGGAAAAGCCAAACCCCGGT
CTCGCGAACAATCTGTCGTCGCATCACGACGTCTCCATCGCAGCAGACAC
ACCCCTGACACACCCCCAGATGGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010125KJC3_010125Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010125-T1KJC3_010125-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010125-T1.cdsKJC3_010125-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010125-T1.exon4KJC3_010125-T1.exon4Aspergillus niger KJC3exon
KJC3_010125-T1.exon3KJC3_010125-T1.exon3Aspergillus niger KJC3exon
KJC3_010125-T1.exon2KJC3_010125-T1.exon2Aspergillus niger KJC3exon
KJC3_010125-T1.exon1KJC3_010125-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR011333
DBxrefInterPro:IPR000210
DBxrefPFAM:PF00651
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2411298..2412497 -
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