You are here

Home

KJC3_010128-T1, KJC3_010128-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010128-T1
Unique NameKJC3_010128-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2420817..2421219-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010128-T1 ID=KJC3_010128-T1|Name=KJC3_010128-T1|organism=Aspergillus niger KJC3|type=mRNA|length=403bp|location=Sequence derived from alignment at ch7:2420817..2421219- (Aspergillus niger KJC3)
ATGTCTTTCCTCTTCGGCGGCGCCCCCAAGCTTTCCTCGGAACAGAAGAT
TGCTGCGGCTGAGACGGAAGTTGAGATGGTCACCGACATGTTCAGCCGGT
AAGATTCAATTATTATCATCCTGTCTATCCATTTATAACGCTCATATTCC
TTTCCTGCCAAACATTTGCCTATTCCCCGGACACTTTTTATACTTAACTA
ACCCACTCATGACCACCAGTCTCACCGAGTCCTGCATCAAGAAGTGCATT
CCCAACGACTACCGCGAAGGTGACCTGAACAAGGGCGAGTCCGTCTGCAT
TGACCGCTGTGTTGGCAAGTTCTTCGAAGTCAACATGAAGGTCAGCGAGA
AGATGCAGGGTGAGGCGAACCAGAAGGGCGGCATGGGTGGTTTCGGCATG
TAA
back to top

Coding sequence (CDS) from alignment at ch7:2420817..2421219-

>KJC3_010128-T1 ID=KJC3_010128-T1|Name=KJC3_010128-T1|organism=Aspergillus niger KJC3|type=CDS|length=564bp|location=Sequence derived from alignment at ch7:2420817..2421219- (Aspergillus niger KJC3)
TCTCACCGAGTCCTGCATCAAGAAGTGCATTCCCAACGACTACCGCGAAG
GTGACCTGAACAAGGGCGAGTCCGTCTGCATTGACCGCTGTGTTGGCAAG
TTCTTCGAAGTCAACATGAAGGTCAGCGAGAAGATGCAGGGTGAGGCGAA
CCAGAAGGGCGGCATGGGTGGTTTCGGCATGTAAATGTCTTTCCTCTTCG
GCGGCGCCCCCAAGCTTTCCTCGGAACAGAAGATTGCTGCGGCTGAGACG
GAAGTTGAGATGGTCACCGACATGTTCAGCCGTCTCACCGAGTCCTGCAT
CAAGAAGTGCATTCCCAACGACTACCGCGAAGGTGACCTGAACAAGGGCG
AGTCCGTCTGCATTGACCGCTGTGTTGGCAAGTTCTTCGAAGTCAACATG
AAGGTCAGCGAGAAGATGCAGGGTGAGGCGAACCAGAAGGGCGGCATGGG
TGGTTTCGGCATGTAAATGTCTTTCCTCTTCGGCGGCGCCCCCAAGCTTT
CCTCGGAACAGAAGATTGCTGCGGCTGAGACGGAAGTTGAGATGGTCACC
GACATGTTCAGCCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIM10KJC3_010128Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010128-T1KJC3_010128-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010128-T1.cdsKJC3_010128-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010128-T1.exon2KJC3_010128-T1.exon2Aspergillus niger KJC3exon
KJC3_010128-T1.exon1KJC3_010128-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR035427
DBxrefInterPro:IPR004217
DBxrefPFAM:PF02953
Productprotein transporter tim10
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2420817..2421219 -
Powered by Drupal