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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2456469..2458140+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010142-T1 ID=KJC3_010142-T1|Name=KJC3_010142-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1672bp|location=Sequence derived from alignment at ch7:2456469..2458140+ (Aspergillus niger KJC3)
CTCACCACCGTATAAATTGAGCTAGTATTCGTAGCTAGCCATGACTCACG
CCATTTCAAGCAACTATACATCAGCACTAGCACCAAGGTACCTTCACCAT
CACATAAACATTCACAGCCTACCCCAACCAGGACCAGATCATCTACCACC
ACCACCACCACCACAACAACATGACCACCAAAATCTACCACACCAACAAC
CTCACCATCTCCCTCTCCCACCACCCAACAACACCCGGCCACACCATCGC
AACCCTAACCAATACCACCACCCCCAAGACCACACTCTTCGCCCTCCCCA
AGTCCACCTTCATCTCCACCCTCGTCACCCTCCGCACCATCATCCCCTCC
CTCAAATCAACCTACCACACCCCCCGCATCGCCTTAATAACCTCCGGCAA
CACCACCCTTTTCCTCCTCCCCCTCCACGGCCTCACCTCAACCTGGACCC
CGATAACCAGTCCCGAAACAACCTTCAACGACCCTCAATCCTCCTCCCAC
CCCCAAAGCTACATAACATCCAAATCCGGCCCCCGCATGCCCTCCGCCCA
CCTAACCCACATAGCCGACATTATCACCACCCACACCCCATCCACCCCCA
ACTACACCTTCCACGGCCCTTCCTCAGACACCAACCTCTTCGCGAACATA
ATTCGGGGCACCGAGCACCCTCAATGGCGTATCTGGGAGGATGAGTCCCG
TGTAGCCTTTCTAACGCCTTATCCGAACACGCCCGGGTTCACGGTGCTAG
TGCCGCGAACACATTTGGGGAGTGATATATTTGCCCTTGGGGAGGAAGAC
TTTGAAGGATTGATGGGCGCGGCGTGGACGGTTGGACGGGTGTTGATGGA
GGCGCTGGGAGTGGGGAGATGTGGGATGGTGTTTGAGGGGTTGGAGGTGG
ATTATGCACATGTCAAGCTGGTTCCTGTCTATGGGGACGGGGAGGATGAT
GGTGGGGAGAGGGAGGTTTTTCGTGAGGTGTATCCTGGGTATGTGAGTTC
TTTGCCTGGGCCGGAGGTGGGGGATGTGGGGGAGTTGGTGAGGAGGGCTG
GGGAGATTCGTCAATTGATTGCTGCGCAGGAGTAGGGAGGAGATGGGGGT
GTGGTTGTGGGTTTGTTTGATTTAATTAATTGATATAAGGATCGGGGTGG
GTTTTCATCGAGTCTCGTTTTCATTGACAAGCACTATATTACACAAAACG
CATTTCTTCACGGAACTAGGGCTCTCCATTAATTGTTGATGGGCACAAGT
GCACGGCATAATTTAGCGATAATTGTTCCATCCTATTCTGCAGATAGATT
TGGACCAATTGTAGAAGCACAAGATCGGCATGTGCCTTCCCCACTACCAG
CACACACAAGAAAGAGGCAAGGGACACCAGGGGTATATGTATCGAAGGGC
AAAAGGTTGGATGATGGATTCGCTGGCCTCGCTTGATCCCTGCGCTGCTG
ATCTCGCGCGCGACCCCGAATCATTCGACACGAGCCAGACATATCACGTA
TAATAGGACCAGGAGACAGCAACGGGGCGAGAGTACAAGTCGCATTTCAG
CGGCTTATGAGGAGAACTTGCGGGTGATCTTGGCAATGACTGGATATGCG
CGTTAGAGGCCACTTCACCACCCAGAAGACAACCCGGAAAGCACACTTAC
CGTGGAGACCAACGACGGAGAA back to topCoding sequence (CDS) from alignment at ch7:2456469..2458140+ >KJC3_010142-T1 ID=KJC3_010142-T1|Name=KJC3_010142-T1|organism=Aspergillus niger KJC3|type=CDS|length=915bp|location=Sequence derived from alignment at ch7:2456469..2458140+ (Aspergillus niger KJC3)
ATGACCACCAAAATCTACCACACCAACAACCTCACCATCTCCCTCTCCCA
CCACCCAACAACACCCGGCCACACCATCGCAACCCTAACCAATACCACCA
CCCCCAAGACCACACTCTTCGCCCTCCCCAAGTCCACCTTCATCTCCACC
CTCGTCACCCTCCGCACCATCATCCCCTCCCTCAAATCAACCTACCACAC
CCCCCGCATCGCCTTAATAACCTCCGGCAACACCACCCTTTTCCTCCTCC
CCCTCCACGGCCTCACCTCAACCTGGACCCCGATAACCAGTCCCGAAACA
ACCTTCAACGACCCTCAATCCTCCTCCCACCCCCAAAGCTACATAACATC
CAAATCCGGCCCCCGCATGCCCTCCGCCCACCTAACCCACATAGCCGACA
TTATCACCACCCACACCCCATCCACCCCCAACTACACCTTCCACGGCCCT
TCCTCAGACACCAACCTCTTCGCGAACATAATTCGGGGCACCGAGCACCC
TCAATGGCGTATCTGGGAGGATGAGTCCCGTGTAGCCTTTCTAACGCCTT
ATCCGAACACGCCCGGGTTCACGGTGCTAGTGCCGCGAACACATTTGGGG
AGTGATATATTTGCCCTTGGGGAGGAAGACTTTGAAGGATTGATGGGCGC
GGCGTGGACGGTTGGACGGGTGTTGATGGAGGCGCTGGGAGTGGGGAGAT
GTGGGATGGTGTTTGAGGGGTTGGAGGTGGATTATGCACATGTCAAGCTG
GTTCCTGTCTATGGGGACGGGGAGGATGATGGTGGGGAGAGGGAGGTTTT
TCGTGAGGTGTATCCTGGGTATGTGAGTTCTTTGCCTGGGCCGGAGGTGG
GGGATGTGGGGGAGTTGGTGAGGAGGGCTGGGGAGATTCGTCAATTGATT
GCTGCGCAGGAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010142-T1.utr5p1 | KJC3_010142-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010142-T1.utr3p1 | KJC3_010142-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011146 |
| DBxref | InterPro:IPR036265 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2456469..2458140 + |
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