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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2493816..2497013+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010153-T1 ID=KJC3_010153-T1|Name=KJC3_010153-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3198bp|location=Sequence derived from alignment at ch7:2493816..2497013+ (Aspergillus niger KJC3)
CATCTCAATCCCACCTAGCACTGCCAACACATTGCACCTGCGAAACTCTT
TCGACGCGTCTTCTTCTTCTGGCGCTCTTTGAGCTGCCAATCTTTGAAGA
AGGCGTAAGTCCATCTCTTGGCCGCATACCTGACGCTCTTCTCCTTTTCT
TGGACCTACTAAACTACTATACTACGCCTCTTTCCTACTACTACACCATG
TGTTCTATATCATGACAATCATCGTCCTACTAAGGACACCCTTCATTTCC
GCCCTCTGGGTCGATCAGTGCTACTATTGATCGATAACGAGAGTGCATCT
TCTATTTTACTCTTTGATTGATGCAATTATTCTTCATTCTTCTCTTCCCT
AACAATCAACCCATCTTGAATACCCTCATAATACTACTTACCGCCACCAT
TTCATCGAGTCACACTATACTACCACCGCCAACCCTCCACCTAACCTTTT
GACACCGCACCTCAACACCTTCCACCTACTTGTTCCTGTCTTCCCTCTTA
CTATTAATATACCTAATCTTCGAAGGGATGGCGCACTTGCGTGGTGGTGA
AAGAACATTTGCCTCAATACATAACCTACTGAAGATGCTACTCTCACCTC
ATCAGTCCAGCAAGTCTGCCCCTCAGGAAGCTGACATGGTCGAGGACATT
GATGAGCCCCCTGATCATCGGTTTCTGAACACGTCGATGAACAACATGGA
CGACGGTGTCGTTTACGTCAAGTCCACCGCCGCCATGACTGACCGGAAGG
AGTCCCTCCTCACCCGCGCCCTCAAGAGCAGCCCCCCTCCAAGCCCAGCC
GATCGTCATTCACCATCTCAGGAGCACTCCTTCTACCGCTCCTACACCTA
TACCAACATCAGCGGCATCTCTACAGCCGAGTTGACCAGCGATGGTGGCC
TCACAAGCCCCTCTCTATCCAATACACCCAGCCCGCCTCTGCCCTCTCAC
TTGTCCAACAACACGTCTTCGATGGGTGATAAGAGAAAGGCGGAGGCGGT
GGAAGTGGGCGAGTCGGCTGTCGAGGCGAACCTGGGACGCAAGCGGTGTA
TCAGCTTCGCCTGCGGACGCAAAGCCGAGGAGCAGAAGCCACAGAACCCT
TCACCACAGCGTCCAGTCACGAAGATCCATGACGCCAGCGTTACACCAAC
TGAGCCTAAGCGGAGGACCGTTCTCACCTTTGTTTGCCCGGCACGGGATC
CCGAAACTCGCCGGGAGAGGTCGCCACTTCGCGGTGGCTGCAGGCCGCGT
CCCCGCGGGTCGCCTGCTCCCATGGCGCGCAAGGCTTCCCCGGAGAAGGC
TGCTCCCTCACCGGTGAGCAAGGCTTCCCAGGAGCAGAAGATTGATCGCC
GGGGTGTCCCGACCAAGGGGTTGGGTAAGTTCGAAGAGTCCGAGGCTACT
CGCTTTCACGAATTTGCCAGCTCCGTCGAGGAAGATGACGAGTGGGTAAC
GAAGTCCGGAGAGTATTCGGAGAAGATTACGCTTAATGACTGTATGAAGA
AAGAGAATGCTATTAGGAAGCTGGGAGAGGAAGCGGAGGAAGAGGCGCTC
GAAGAAGATGACGAAGATGATGTTGAGGACTCCGATGACGACTCGACCGT
TCACGATTTCTCTTCTGATGACGGAAATGAATCGGATAATGAAGCTGGTT
TTGCAGAGTCAGACGAGAGTGATGATGGTTCGGAATACGATTTTTGGGCT
CCGACCAGCACTACTGCTGCCACCAGCCCTCAAAATGCCGACATCGCTCG
CCACCCTTTCAGTCGCCGCGACTCGAACACGTCTTTCGATTCTGCCAACG
ATGTGCAGCAGCAGCAAAGATGGTCGCCTGTCTTATCTGCCAAGACAACT
AGCCGATCGCCCATGAAGATCCCAAAGTTGCGTCCTGGCACACCTAACCT
TCCCGACAGTACGGACTTCGTCTGCGGAACTTTCGACGAAGACCGGCCTC
TGGAGGCTGCCTACAAGTCTTGCATCGAGCAGCGCCGTCTTTCCAAGCAA
ATTGTCATCCCTCAAGATATCGATCCCAGCTTTCCCACTTCGGATCCTGA
AGATGAGGAGGATGAGGAGGATGATATTGAGGAATCTGTGATGGATGAAG
GACCTCGGGGACGGACTGGTAGAGACTCTGCGCAGAAGCCTTCTCCTCGT
ACGTCTCCCAGACGTATGGTCTCACCTCCGCCTCGCCGTCAGGGTCGTTC
CTCGCCAAAGCGTCTTCGCTCTCCGCCGCCGCCGATGAAGCTGCGGTCTT
CCAAGGATGACCTGGCATCTGCGGATGAGGCCCCTGCTGTGCCGTCGCGG
GGACTGAACATCAGTGAACTGGTGCAACGTCCCGCGATGTCTCGTACCAA
GTCCCTGCCTCGGACGCCCAACCCTTTCTTCACTAGTTTGGACAAGTCTC
ACCGCTGGTCTGGCATTGTCCCTGTTTACGAATCGCCGGAGCGCGAGTCG
TCACGCACCCGTGAGGTGCACACCAGAGGTCCCATCGATATTGTTGAGGG
TCTCGAGAAGAAACGCCAGAAACGAAAGGAGAAGTTCTGGCGTCAGCATT
GCCGCAAAGCTGCCAAGGAGCAGATGGTACGGCGACCGATCCCCGGAAAA
GGTGCTGAACGGATGAAGGAGCTTGGCCTCGAAGTTGCTGAGAGGTGCAG
AGCTTACGGCGTTGGAGAGAACGCCCAGCTCGTCCTATCTGTTTAGACCT
CAAATTCCGCGTGGGATTCGATAAATTCTTGTACATAGTTCGAATTTTTC
TTATCACCCTTTCAGTCGTCCACTTTCATGACCAGCGGACCGACGTGGTG
TACAAATTCCAATTGAGCGTTGTTCGCTACACCCCTTGTCTTCGATGTTG
CTATTCTTGTCCTCACAACGTGTCCATCGGATTTCTATTCGCACGGAGGG
TCCCGTCTGCATTTACAGGGGTGGCTACCTTTGATTCTTCCTTTTTCGCC
CGTCCCCCTTTCTTTTCGCTCTTCTTCTCATTATACATAGCTTGTTTATT
CCTTCTTTTCTTCATTGTTCACGTCCGCGCTGCTGAGCGGCGGATTTGAC
GTTTCGGTCGGCATCATTGCTCGGTTAGCCTGGGTTGCATGGAGGCGGTT
TGCTGCGCGTATACCCCCGTTTGCTTTCGTTATCGAATTTGTAGATACAG
AGCGAATGACATGTGTCATTGAATATGCCAACGTATGATGAACTACTC back to topCoding sequence (CDS) from alignment at ch7:2493816..2497013+ >KJC3_010153-T1 ID=KJC3_010153-T1|Name=KJC3_010153-T1|organism=Aspergillus niger KJC3|type=CDS|length=2169bp|location=Sequence derived from alignment at ch7:2493816..2497013+ (Aspergillus niger KJC3)
ATGGCGCACTTGCGTGGTGGTGAAAGAACATTTGCCTCAATACATAACCT
ACTGAAGATGCTACTCTCACCTCATCAGTCCAGCAAGTCTGCCCCTCAGG
AAGCTGACATGGTCGAGGACATTGATGAGCCCCCTGATCATCGGTTTCTG
AACACGTCGATGAACAACATGGACGACGGTGTCGTTTACGTCAAGTCCAC
CGCCGCCATGACTGACCGGAAGGAGTCCCTCCTCACCCGCGCCCTCAAGA
GCAGCCCCCCTCCAAGCCCAGCCGATCGTCATTCACCATCTCAGGAGCAC
TCCTTCTACCGCTCCTACACCTATACCAACATCAGCGGCATCTCTACAGC
CGAGTTGACCAGCGATGGTGGCCTCACAAGCCCCTCTCTATCCAATACAC
CCAGCCCGCCTCTGCCCTCTCACTTGTCCAACAACACGTCTTCGATGGGT
GATAAGAGAAAGGCGGAGGCGGTGGAAGTGGGCGAGTCGGCTGTCGAGGC
GAACCTGGGACGCAAGCGGTGTATCAGCTTCGCCTGCGGACGCAAAGCCG
AGGAGCAGAAGCCACAGAACCCTTCACCACAGCGTCCAGTCACGAAGATC
CATGACGCCAGCGTTACACCAACTGAGCCTAAGCGGAGGACCGTTCTCAC
CTTTGTTTGCCCGGCACGGGATCCCGAAACTCGCCGGGAGAGGTCGCCAC
TTCGCGGTGGCTGCAGGCCGCGTCCCCGCGGGTCGCCTGCTCCCATGGCG
CGCAAGGCTTCCCCGGAGAAGGCTGCTCCCTCACCGGTGAGCAAGGCTTC
CCAGGAGCAGAAGATTGATCGCCGGGGTGTCCCGACCAAGGGGTTGGGTA
AGTTCGAAGAGTCCGAGGCTACTCGCTTTCACGAATTTGCCAGCTCCGTC
GAGGAAGATGACGAGTGGGTAACGAAGTCCGGAGAGTATTCGGAGAAGAT
TACGCTTAATGACTGTATGAAGAAAGAGAATGCTATTAGGAAGCTGGGAG
AGGAAGCGGAGGAAGAGGCGCTCGAAGAAGATGACGAAGATGATGTTGAG
GACTCCGATGACGACTCGACCGTTCACGATTTCTCTTCTGATGACGGAAA
TGAATCGGATAATGAAGCTGGTTTTGCAGAGTCAGACGAGAGTGATGATG
GTTCGGAATACGATTTTTGGGCTCCGACCAGCACTACTGCTGCCACCAGC
CCTCAAAATGCCGACATCGCTCGCCACCCTTTCAGTCGCCGCGACTCGAA
CACGTCTTTCGATTCTGCCAACGATGTGCAGCAGCAGCAAAGATGGTCGC
CTGTCTTATCTGCCAAGACAACTAGCCGATCGCCCATGAAGATCCCAAAG
TTGCGTCCTGGCACACCTAACCTTCCCGACAGTACGGACTTCGTCTGCGG
AACTTTCGACGAAGACCGGCCTCTGGAGGCTGCCTACAAGTCTTGCATCG
AGCAGCGCCGTCTTTCCAAGCAAATTGTCATCCCTCAAGATATCGATCCC
AGCTTTCCCACTTCGGATCCTGAAGATGAGGAGGATGAGGAGGATGATAT
TGAGGAATCTGTGATGGATGAAGGACCTCGGGGACGGACTGGTAGAGACT
CTGCGCAGAAGCCTTCTCCTCGTACGTCTCCCAGACGTATGGTCTCACCT
CCGCCTCGCCGTCAGGGTCGTTCCTCGCCAAAGCGTCTTCGCTCTCCGCC
GCCGCCGATGAAGCTGCGGTCTTCCAAGGATGACCTGGCATCTGCGGATG
AGGCCCCTGCTGTGCCGTCGCGGGGACTGAACATCAGTGAACTGGTGCAA
CGTCCCGCGATGTCTCGTACCAAGTCCCTGCCTCGGACGCCCAACCCTTT
CTTCACTAGTTTGGACAAGTCTCACCGCTGGTCTGGCATTGTCCCTGTTT
ACGAATCGCCGGAGCGCGAGTCGTCACGCACCCGTGAGGTGCACACCAGA
GGTCCCATCGATATTGTTGAGGGTCTCGAGAAGAAACGCCAGAAACGAAA
GGAGAAGTTCTGGCGTCAGCATTGCCGCAAAGCTGCCAAGGAGCAGATGG
TACGGCGACCGATCCCCGGAAAAGGTGCTGAACGGATGAAGGAGCTTGGC
CTCGAAGTTGCTGAGAGGTGCAGAGCTTACGGCGTTGGAGAGAACGCCCA
GCTCGTCCTATCTGTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010153-T1.utr5p1 | KJC3_010153-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010153-T1.utr3p1 | KJC3_010153-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018853 |
| DBxref | PFAM:PF10446 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2493816..2497013 + |
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