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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2524595..2526901+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010160-T1 ID=KJC3_010160-T1|Name=KJC3_010160-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2307bp|location=Sequence derived from alignment at ch7:2524595..2526901+ (Aspergillus niger KJC3)
ATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAA
GTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGC
TTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGC
AGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTC
GAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGG
ATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTG
GACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGT
TCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGA
CCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCC
AAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAA
GGGTAAGTTGCATTTCAAACCAGGCAAGCGTGACAGGTATTAACAATAAT
ATTTTGCCAGATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTT
GAACGTGGACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCG
GTGCTAAGCGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTC
CCTGATGCTGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCA
AACGGGCAATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGA
CTTCCTTTGTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACACC
TTGGGCCAGCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCA
ACCCCCTATCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCC
AATTCAGCCAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACC
GCCACGATTCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAA
TGTTGGAAATGCCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGA
CCTTTGGCCAGCAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATG
GTGGCCAACGCGACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAA
CCGCATTGCACTTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACG
ATGGCCAGGGTAAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGC
CTGGCCAGCCCGGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCT
GTTGAACACTCAGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGA
TGGCGGGTCGTCGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGT
GCTGGCGGACTTGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTT
CTTGGCAGCATATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTG
CACTTGGTATCGGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCA
GACCACTCGGAAGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAG
CTCGAAGCCGCCGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTC
CCAGCTGGCTGAGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAG
GACTTGAAATGGACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGA
CCGCGGCGTCAATGCTCTTGGTGCCAGAAACAAAATGCTCAAGGTGAGTT
ACATAAACTCTCCAAGGTGTTTAGACATCATGCTAATCTTTGTAGGTTTT
TGAACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGACAACATTGCGT
GATGAAGTGCAGCCATTCATTCATTCGACTTGACTTAACGTTTCTGCTTA
CATTCTCTCTATTGCATTAATTGACTAGATTGGCTTTGGGCATAAGTGGC
AGGATCCGAAATGAACCTATGAGCGATCTCATCGGAAATGAATCTTGGGA
GGAAGTTGTCTAGTAATGGGATTCGAACGCCATTGGGGCAGTTGGATGAG
TGACCGACTTGACTGACTTATTGACTTATTGTTTGTATGGATGTATTCAC
ATGTTCATGTAGACGTGCGTGGGGCTGTGTCTCAGCATGTCGTGTTATGA
CGGCTAGGATGTTAATGGTATAATCATCATGGCTTTGGTAAATATAATTG
TTTGCAG back to topCoding sequence (CDS) from alignment at ch7:2524595..2526901+ >KJC3_010160-T1 ID=KJC3_010160-T1|Name=KJC3_010160-T1|organism=Aspergillus niger KJC3|type=CDS|length=5526bp|location=Sequence derived from alignment at ch7:2524595..2526901+ (Aspergillus niger KJC3)
ATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAA
GTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGC
TTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGC
AGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTC
GAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGG
ATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTG
GACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGT
TCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGA
CCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCC
AAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAA
GGATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTTGAACGTGG
ACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGGTGCTAAG
CGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTCCCTGATGC
TGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCAAACGGGCA
ATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGACTTCCTTT
GTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACACCTTGGGCCA
GCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCAACCCCCTA
TCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCCAATTCAGC
CAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACCGCCACGAT
TCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAATGTTGGAA
ATGCCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGACCTTTGGC
CAGCAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATGGTGGCCAA
CGCGACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAACCGCATTG
CACTTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACGATGGCCAG
GGTAAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGCCTGGCCAG
CCCGGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCTGTTGAACA
CTCAGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGATGGCGGGT
CGTCGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGTGCTGGCGG
ACTTGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTTCTTGGCAG
CATATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTGCACTTGGT
ATCGGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCAGACCACTC
GGAAGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAGCTCGAAGC
CGCCGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTCCCAGCTGG
CTGAGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAGGACTTGAA
ATGGACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGACCGCGGCG
TCAATGCTCTTGGTGCCAGAAACAAAATGCTCAAGGTTTTTGAACAAGTC
AGAGAAGCCAAAGCCGAGGGCAAGCTCGACAACATTGCGTGAATGGCCAG
CCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAAGTCCAGTC
TTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGCTTCGTGCA
TCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGCAGCATCCG
TCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTCGAACAACG
CGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGGATATTGAT
CAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTGGACCAGGA
TTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGTTCTCAGCG
AGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGACCACTCAG
GTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCCAAGAGCCA
TCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAAGGATGCCA
TGTCTAACCGCTTGAACGATGCCATGTCCAAGTTGAACGTGGACAGCTCC
CGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGGTGCTAAGCGCAACTC
CGGACTCGACTCGTCCACCATTAATGCCATGTTCCCTGATGCTGCTGCGG
CAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCAAACGGGCAATGCTCCT
CCCTCGAACCGGAACAGCGCTGTTTTCGATCGGACTTCCTTTGTGGCACC
CACCATTTCGGCCCCAGACAACAGCAACGACACCTTGGGCCAGCCTCCGG
TTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCAACCCCCTATCGCCCGT
CCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCCAATTCAGCCAGACTCC
TTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACCGCCACGATTCCTGCCC
CCGAGATTGATGCTCCTTTGCTCTCGCCGTACAATGTTGGAAATGCCAGC
TGGGCCTCCATGACCAACACCCCCATGACGGCGACCTTTGGCCAGCAGCC
GCAGCAGCCCCAGCAGAATTCGCAGGCCGATATGGTGGCCAACGCGACTG
CGATGAAGCTGGCCGCACTGTCGACCGTCAACAACCGCATTGCACTTGAT
GATGCTCGCAAGTACCGTCGGGCTCGCTCCAACGATGGCCAGGGTAAGAA
CTCGGCCAACAGCCACGCCATGTCTCAGGGTGGCCTGGCCAGCCCGGGCC
TCCCGGGCCACAGTCACCTTGTTGCCGGACAGCTGTTGAACACTCAGCAG
CTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGATGGCGGGTCGTCGCTC
CCGCCCGACGTCGCCTGGAATCGCCATGCAGGGTGCTGGCGGACTTGGTC
CGATGGGCTTCACTTCGCCGCAGAACAACGGCTTCTTGGCAGCATATGAC
CCGAACAACCCGCTCATGGGTAACGGCCTGGGTGCACTTGGTATCGGGCA
GTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCAGACCACTCGGAAGTGG
CTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAGCTCGAAGCCGCCGGAG
GACCCCACGGACCCTAACCTCTTGAAGGACATTCCCAGCTGGCTGAGATC
GCTGCGGCTGCACAAGTACACGGAAAACCTGAAGGACTTGAAATGGACGG
AGCTGGTCGAATTGAACGACAAGGCGCTGGAAGACCGCGGCGTCAATGCT
CTTGGTGCCAGAAACAAAATGCTCAAGGTTTTTGAACAAGTCAGAGAAGC
CAAAGCCGAGGGCAAGCTCGACAACATTGCGTGAATGGCCAGCCATATCA
TCGGCAACCGCAACAGCACGCCTGAAGCCTCCAAGTCCAGTCTTCGTCCT
CCATCGTCGTCTCGGAATCTAGGATCGCACCAGCTTCGTGCATCGGCCGA
TATGTCGGGCTTCCCATCTCCTCTGTCATCCCGCAGCATCCGTCCTTCCT
CGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTCGAACAACGCGGAGGAT
CCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGGATATTGATCAGTACGA
GACTACATTGGAAGAAATGGCCGCTGCCACGCTGGACCAGGATTTCAAGG
ATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGTTCTCAGCGAGGCGGAG
AGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGACCACTCAGGTGCAGAT
TCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCCAAGAGCCATCCCATGT
CGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAAGGATGCCATGTCTAAC
CGCTTGAACGATGCCATGTCCAAGTTGAACGTGGACAGCTCCCGGAGCTC
CCTCGGTCGCCCCCCGCCGTCCCCCGGTGCTAAGCGCAACTCCGGACTCG
ACTCGTCCACCATTAATGCCATGTTCCCTGATGCTGCTGCGGCAATTGCA
AAGAAGAAGGCCGAGTTCACCCAGCAAACGGGCAATGCTCCTCCCTCGAA
CCGGAACAGCGCTGTTTTCGATCGGACTTCCTTTGTGGCACCCACCATTT
CGGCCCCAGACAACAGCAACGACACCTTGGGCCAGCCTCCGGTTTCACCC
TGGGCCCAGCGCGGATCTGAGCCGCAACCCCCTATCGCCCGTCCCAAGTC
TTCGTCCGGTCATCAGCCCATGGGCCAATTCAGCCAGACTCCTTCGAGCC
TGCGCTCTCCGCTCCCTACCCAAACCGCCACGATTCCTGCCCCCGAGATT
GATGCTCCTTTGCTCTCGCCGTACAATGTTGGAAATGCCAGCTGGGCCTC
CATGACCAACACCCCCATGACGGCGACCTTTGGCCAGCAGCCGCAGCAGC
CCCAGCAGAATTCGCAGGCCGATATGGTGGCCAACGCGACTGCGATGAAG
CTGGCCGCACTGTCGACCGTCAACAACCGCATTGCACTTGATGATGCTCG
CAAGTACCGTCGGGCTCGCTCCAACGATGGCCAGGGTAAGAACTCGGCCA
ACAGCCACGCCATGTCTCAGGGTGGCCTGGCCAGCCCGGGCCTCCCGGGC
CACAGTCACCTTGTTGCCGGACAGCTGTTGAACACTCAGCAGCTGGCGGC
TTTGCAGGCACAGCAACAGGCTGCGATGGCGGGTCGTCGCTCCCGCCCGA
CGTCGCCTGGAATCGCCATGCAGGGTGCTGGCGGACTTGGTCCGATGGGC
TTCACTTCGCCGCAGAACAACGGCTTCTTGGCAGCATATGACCCGAACAA
CCCGCTCATGGGTAACGGCCTGGGTGCACTTGGTATCGGGCAGTTTGGCC
TGGGAGGTCCTGAGGGCTACCTCTCAGACCACTCGGAAGTGGCTCGCGGC
CGGTCCCCGCGTGGTCGTCGCGGTAGCTCGAAGCCGCCGGAGGACCCCAC
GGACCCTAACCTCTTGAAGGACATTCCCAGCTGGCTGAGATCGCTGCGGC
TGCACAAGTACACGGAAAACCTGAAGGACTTGAAATGGACGGAGCTGGTC
GAATTGAACGACAAGGCGCTGGAAGACCGCGGCGTCAATGCTCTTGGTGC
CAGAAACAAAATGCTCAAGGTTTTTGAACAAGTCAGAGAAGCCAAAGCCG
AGGGCAAGCTCGACAACATTGCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0043488 | regulation of mRNA stability |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003729 | mRNA binding |
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010160-T1.utr3p1 | KJC3_010160-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037635 |
| DBxref | InterPro:IPR013761 |
| DBxref | InterPro:IPR001660 |
| DBxref | PFAM:PF07647 |
| Product | Flap-structured DNA-binding and RNA-binding protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2524595..2526901 + |
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