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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2551758..2554738- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010172-T1 ID=KJC3_010172-T1|Name=KJC3_010172-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2981bp|location=Sequence derived from alignment at ch7:2551758..2554738- (Aspergillus niger KJC3)
CTCCATCTTCTTGCTTCTCTTCCTTCCCTCTCATAACACTCCTCCTCCAC
ATCGAGGTTCGCAGTTGCTTAACTGGGACCGTTCTCGATTTCTCGATTAT
CGCATCGAGTATCTCTCTCGCTTACACTCCTTCTTCCTATTCCTTCCTAC
GAAACCTCTTCGAATCGATCGTTGTATGTTTTATTGATCCGATCTCGAAC
TACTAAAGGCGAGCAGCGCTCGTTTCGCCTCCACAACACTCAACTTCTAC
CATTCTCTCCTTCGCCCTCTGTCTTCTTACGAAACCTTACTACGAAAAAA
AATCTCGCCTCTATCAGCATGAAGGGCGGAAAAGGATCTCGCGGTCGCTC
GGGGGGTTCGGATCGTGGGGGCATCCGCAAGCGGGGTGCTACGACCCGGG
TCGACCGAGAAGGTGATCTGATGATGGATGCTGGCTCTGCACGAAACCGT
GGAAAGAAGGTTCGTGGCGATTCTGGCCGGTCGCAGGCAGCGAACAAAGC
CATGGATGCGATCCAGAAGGCCATCTCCAGCAACTCAGACACTCAAGCGA
ACATCCGACAAGGAGGACGGGGAAGTGGTCTGGAACAGGTTATTGTTCGT
GGCTGGAAACAAAGCAAGGCAGCATCTAACCGCGACGGCGGTCTCGAATC
CCTCATCGCCTTCCTCGAGAAAAAACTCAGCCCACCCGACTCGAAAGCTG
GCACACGCGCAAGGATTACAAAGGTATGTGCAACACCAGAACTGGCGGTC
ACCGACATCAATTATCAGCTTCGTCCTCTCCGATGTGCTCTCGTTTGCAG
GGGTGGTGCGTTCAGAACGACGATCGGCACTTTCTTAGTCTCTCCTGGCG
TTTGTTCTTTTGGATGAATGGCGCGGCTCGCAAGGTCCCTTATGCCTTAC
TAACGTTCATTAGTCGCGGGTTGAAGGCGACGCTCTTATCGTCTCTATTC
GGCCAGAGTTGTTGGAAAGGATGCTTCAGCTCAATGGGTTTAGTTTTGCA
GGTGCCCCTCTTACCACCGAAAAGTATGACCCGTCTACTGGTGGGTTGCT
GGACCAGCCTATGCTGTCTGCTATGGCACAAAATGGCGGCACATCCTCTG
CTGCCGAGACCAAGGCGAAAATGACGACAATTCTCGGCAAGCGCTACACC
CAGCAGACAAAATTACTCGATCTTTCGAAATTGGGAACCGATCCGGATCT
CTTGGCTATGGGAATCTTTGGCAGCACATCCACCGAGTCGAAATTCTTCC
CGGCACTGATGAAGGTTTGGGAGCTGAATTTCGACAATGCCACTGCGCGT
CGAGAGGCAGTGGAGAGTGTCAGTCTCGCTCATAATCAGCTTGCCAACAT
CACAGCTGTGACGGCACTAGCATCGACAATTCCAGACCTGAAAAATCTGG
ATCTTTCCAACAATGAATTCAAAGATGCGCAATCCTTGATTGGATGGCGC
TGGAAATTCCGCAATCTCGAGTTTCTCGATCTCTCAAACACTCCGTTCAG
CGCCGACCCTACTTTCAAGGATACCATGTTGAAGTGGTATCCCAAGCTCC
GGTTCCTGAACAATGTCGAAGTCCGTACCGCAGAAGAAATAGCGGCGCAG
AAGAAGACGCCGATTCCTGTGCAACCACCGCACTTCCAGGACGACTCTCA
GATCGCAGAGAACTTTGTTAGGGCTTTCTTCGCGGGCTACGACAACGACC
GAAGCGGCATTCTCAACAGTGTCTACGACAACCACACGACGTTCACTCTC
AATGTGAATACATCGGCTCCCAGGGCCCAACAAACAGAAACAGCGCCCTG
GGATGCGTATATCAAGAAAAGCAGAAACCTTCTCAAGATCAGCCATCTTC
CTGCACGCATGTCTAGGGTATACACCGGTGCGGAGAAAATCCGCGAGTTG
TGGACTAGTCTTCCCGCGACTAGACATCCTGACATTGCGACGCGCCCGGA
AGAATGGCTTATCGAGTGCTACCCTATCCCGGGTCTTCCTGATATTTCCG
GGCAGAGCTCCACGGGTGTTGGTGGACTTCTCATCATGGTGCACGGGAAG
TTCGACGAGATTAATGGGGCCAAGGTTGAAACTCGCAGTTTCGATAGGAC
ATTCATCATCGGGCCCGGTGGTGGTATGGGCGGAATCAGGGTCGTCAGTG
ATATTCTCTGCTTGCGAGCCTATGGTGGACACGAGGCATGGATTCCTGAG
GTTCCACCAGCCGTACCCCAAGCTGCACCTCCAGCTGCACCAGCACCAGC
ACCCGCAGCCCCTGCAGCCCCTGCGGCACTACCAGTAGCCATTCCGGGTG
CTCCCGAAGGCTACGGCATGCCAGCGCCTGGAAAAGCAGACGCACAAGTC
CAGCAAGAGCAGCTAGTACTTCAGATGAGCTCTAATACTCGAATGACCCT
CCAGTACTCTGAGATGGCTTTGTCTGGAAACGGCTGGAATATGGAGGCTG
CACTGAAGAACTTTGAGGAACTTAAGGTAAGTTCGAAGTGTATTCTCCGT
CTACGATCATGCGCTAACAAGCTTTTGCAGGCGCAGGGAACATTGCCTCC
GGAGGCTTTTCTACCCGCAGCAGTGTAGTTTGACCAAGGAGGACAGGGCC
AAATACGAAAAGAACAAAAGAAAAATAAAAATAAAAATAAGAAGATATAC
CAAATGGACGGGGAACAACTTCTCGAGCGACTCTCTCCCAGACTTGTCTG
GTCTTCGCATCCCCGACTCTCGTCGGGAGGTTCCTGGTGGTGTTTGATCG
GAGTCAACTGTCTCTTTATTTGTGATTTGCTGATGCATGGCTTGGGCGAA
TGGCTTCGGAGCTCGTTACAATTGCTTTAATTTTCTTTCGTTGTACACTA
AAAGACTACGACCATTTTCATGTCCATATAGACGAGACCTGCAGTACAAG
GGGTGGTTTAATCATAACAGAAACCTAGGGTCGATTCTAGGGGGAGGAAT
GGCCTCCAAATTGATACCACTTGACCTATCC back to topCoding sequence (CDS) from alignment at ch7:2551758..2554738- >KJC3_010172-T1 ID=KJC3_010172-T1|Name=KJC3_010172-T1|organism=Aspergillus niger KJC3|type=CDS|length=6048bp|location=Sequence derived from alignment at ch7:2551758..2554738- (Aspergillus niger KJC3)
GCGCAGGGAACATTGCCTCCGGAGGCTTTTCTACCCGCAGCAGTGTAGTC
GCGGGTTGAAGGCGACGCTCTTATCGTCTCTATTCGGCCAGAGTTGTTGG
AAAGGATGCTTCAGCTCAATGGGTTTAGTTTTGCAGGTGCCCCTCTTACC
ACCGAAAAGTATGACCCGTCTACTGGTGGGTTGCTGGACCAGCCTATGCT
GTCTGCTATGGCACAAAATGGCGGCACATCCTCTGCTGCCGAGACCAAGG
CGAAAATGACGACAATTCTCGGCAAGCGCTACACCCAGCAGACAAAATTA
CTCGATCTTTCGAAATTGGGAACCGATCCGGATCTCTTGGCTATGGGAAT
CTTTGGCAGCACATCCACCGAGTCGAAATTCTTCCCGGCACTGATGAAGG
TTTGGGAGCTGAATTTCGACAATGCCACTGCGCGTCGAGAGGCAGTGGAG
AGTGTCAGTCTCGCTCATAATCAGCTTGCCAACATCACAGCTGTGACGGC
ACTAGCATCGACAATTCCAGACCTGAAAAATCTGGATCTTTCCAACAATG
AATTCAAAGATGCGCAATCCTTGATTGGATGGCGCTGGAAATTCCGCAAT
CTCGAGTTTCTCGATCTCTCAAACACTCCGTTCAGCGCCGACCCTACTTT
CAAGGATACCATGTTGAAGTGGTATCCCAAGCTCCGGTTCCTGAACAATG
TCGAAGTCCGTACCGCAGAAGAAATAGCGGCGCAGAAGAAGACGCCGATT
CCTGTGCAACCACCGCACTTCCAGGACGACTCTCAGATCGCAGAGAACTT
TGTTAGGGCTTTCTTCGCGGGCTACGACAACGACCGAAGCGGCATTCTCA
ACAGTGTCTACGACAACCACACGACGTTCACTCTCAATGTGAATACATCG
GCTCCCAGGGCCCAACAAACAGAAACAGCGCCCTGGGATGCGTATATCAA
GAAAAGCAGAAACCTTCTCAAGATCAGCCATCTTCCTGCACGCATGTCTA
GGGTATACACCGGTGCGGAGAAAATCCGCGAGTTGTGGACTAGTCTTCCC
GCGACTAGACATCCTGACATTGCGACGCGCCCGGAAGAATGGCTTATCGA
GTGCTACCCTATCCCGGGTCTTCCTGATATTTCCGGGCAGAGCTCCACGG
GTGTTGGTGGACTTCTCATCATGGTGCACGGGAAGTTCGACGAGATTAAT
GGGGCCAAGGTTGAAACTCGCAGTTTCGATAGGACATTCATCATCGGGCC
CGGTGGTGGTATGGGCGGAATCAGGGTCGTCAGTGATATTCTCTGCTTGC
GAGCCTATGGTGGACACGAGGCATGGATTCCTGAGGTTCCACCAGCCGTA
CCCCAAGCTGCACCTCCAGCTGCACCAGCACCAGCACCCGCAGCCCCTGC
AGCCCCTGCGGCACTACCAGTAGCCATTCCGGGTGCTCCCGAAGGCTACG
GCATGCCAGCGCCTGGAAAAGCAGACGCACAAGTCCAGCAAGAGCAGCTA
GTACTTCAGATGAGCTCTAATACTCGAATGACCCTCCAGTACTCTGAGAT
GGCTTTGTCTGGAAACGGCTGGAATATGGAGGCTGCACTGAAGAACTTTG
AGGAACTTAAGATGAAGGGCGGAAAAGGATCTCGCGGTCGCTCGGGGGGT
TCGGATCGTGGGGGCATCCGCAAGCGGGGTGCTACGACCCGGGTCGACCG
AGAAGGTGATCTGATGATGGATGCTGGCTCTGCACGAAACCGTGGAAAGA
AGGTTCGTGGCGATTCTGGCCGGTCGCAGGCAGCGAACAAAGCCATGGAT
GCGATCCAGAAGGCCATCTCCAGCAACTCAGACACTCAAGCGAACATCCG
ACAAGGAGGACGGGGAAGTGGTCTGGAACAGGTTATTGTTCGTGGCTGGA
AACAAAGCAAGGCAGCATCTAACCGCGACGGCGGTCTCGAATCCCTCATC
GCCTTCCTCGAGAAAAAACTCAGCCCACCCGACTCGAAAGCTGGCACACG
CGCAAGGATTACAAAGGCGCAGGGAACATTGCCTCCGGAGGCTTTTCTAC
CCGCAGCAGTGTAGTCGCGGGTTGAAGGCGACGCTCTTATCGTCTCTATT
CGGCCAGAGTTGTTGGAAAGGATGCTTCAGCTCAATGGGTTTAGTTTTGC
AGGTGCCCCTCTTACCACCGAAAAGTATGACCCGTCTACTGGTGGGTTGC
TGGACCAGCCTATGCTGTCTGCTATGGCACAAAATGGCGGCACATCCTCT
GCTGCCGAGACCAAGGCGAAAATGACGACAATTCTCGGCAAGCGCTACAC
CCAGCAGACAAAATTACTCGATCTTTCGAAATTGGGAACCGATCCGGATC
TCTTGGCTATGGGAATCTTTGGCAGCACATCCACCGAGTCGAAATTCTTC
CCGGCACTGATGAAGGTTTGGGAGCTGAATTTCGACAATGCCACTGCGCG
TCGAGAGGCAGTGGAGAGTGTCAGTCTCGCTCATAATCAGCTTGCCAACA
TCACAGCTGTGACGGCACTAGCATCGACAATTCCAGACCTGAAAAATCTG
GATCTTTCCAACAATGAATTCAAAGATGCGCAATCCTTGATTGGATGGCG
CTGGAAATTCCGCAATCTCGAGTTTCTCGATCTCTCAAACACTCCGTTCA
GCGCCGACCCTACTTTCAAGGATACCATGTTGAAGTGGTATCCCAAGCTC
CGGTTCCTGAACAATGTCGAAGTCCGTACCGCAGAAGAAATAGCGGCGCA
GAAGAAGACGCCGATTCCTGTGCAACCACCGCACTTCCAGGACGACTCTC
AGATCGCAGAGAACTTTGTTAGGGCTTTCTTCGCGGGCTACGACAACGAC
CGAAGCGGCATTCTCAACAGTGTCTACGACAACCACACGACGTTCACTCT
CAATGTGAATACATCGGCTCCCAGGGCCCAACAAACAGAAACAGCGCCCT
GGGATGCGTATATCAAGAAAAGCAGAAACCTTCTCAAGATCAGCCATCTT
CCTGCACGCATGTCTAGGGTATACACCGGTGCGGAGAAAATCCGCGAGTT
GTGGACTAGTCTTCCCGCGACTAGACATCCTGACATTGCGACGCGCCCGG
AAGAATGGCTTATCGAGTGCTACCCTATCCCGGGTCTTCCTGATATTTCC
GGGCAGAGCTCCACGGGTGTTGGTGGACTTCTCATCATGGTGCACGGGAA
GTTCGACGAGATTAATGGGGCCAAGGTTGAAACTCGCAGTTTCGATAGGA
CATTCATCATCGGGCCCGGTGGTGGTATGGGCGGAATCAGGGTCGTCAGT
GATATTCTCTGCTTGCGAGCCTATGGTGGACACGAGGCATGGATTCCTGA
GGTTCCACCAGCCGTACCCCAAGCTGCACCTCCAGCTGCACCAGCACCAG
CACCCGCAGCCCCTGCAGCCCCTGCGGCACTACCAGTAGCCATTCCGGGT
GCTCCCGAAGGCTACGGCATGCCAGCGCCTGGAAAAGCAGACGCACAAGT
CCAGCAAGAGCAGCTAGTACTTCAGATGAGCTCTAATACTCGAATGACCC
TCCAGTACTCTGAGATGGCTTTGTCTGGAAACGGCTGGAATATGGAGGCT
GCACTGAAGAACTTTGAGGAACTTAAGATGAAGGGCGGAAAAGGATCTCG
CGGTCGCTCGGGGGGTTCGGATCGTGGGGGCATCCGCAAGCGGGGTGCTA
CGACCCGGGTCGACCGAGAAGGTGATCTGATGATGGATGCTGGCTCTGCA
CGAAACCGTGGAAAGAAGGTTCGTGGCGATTCTGGCCGGTCGCAGGCAGC
GAACAAAGCCATGGATGCGATCCAGAAGGCCATCTCCAGCAACTCAGACA
CTCAAGCGAACATCCGACAAGGAGGACGGGGAAGTGGTCTGGAACAGGTT
ATTGTTCGTGGCTGGAAACAAAGCAAGGCAGCATCTAACCGCGACGGCGG
TCTCGAATCCCTCATCGCCTTCCTCGAGAAAAAACTCAGCCCACCCGACT
CGAAAGCTGGCACACGCGCAAGGATTACAAAGGCGCAGGGAACATTGCCT
CCGGAGGCTTTTCTACCCGCAGCAGTGTAGTCGCGGGTTGAAGGCGACGC
TCTTATCGTCTCTATTCGGCCAGAGTTGTTGGAAAGGATGCTTCAGCTCA
ATGGGTTTAGTTTTGCAGGTGCCCCTCTTACCACCGAAAAGTATGACCCG
TCTACTGGTGGGTTGCTGGACCAGCCTATGCTGTCTGCTATGGCACAAAA
TGGCGGCACATCCTCTGCTGCCGAGACCAAGGCGAAAATGACGACAATTC
TCGGCAAGCGCTACACCCAGCAGACAAAATTACTCGATCTTTCGAAATTG
GGAACCGATCCGGATCTCTTGGCTATGGGAATCTTTGGCAGCACATCCAC
CGAGTCGAAATTCTTCCCGGCACTGATGAAGGTTTGGGAGCTGAATTTCG
ACAATGCCACTGCGCGTCGAGAGGCAGTGGAGAGTGTCAGTCTCGCTCAT
AATCAGCTTGCCAACATCACAGCTGTGACGGCACTAGCATCGACAATTCC
AGACCTGAAAAATCTGGATCTTTCCAACAATGAATTCAAAGATGCGCAAT
CCTTGATTGGATGGCGCTGGAAATTCCGCAATCTCGAGTTTCTCGATCTC
TCAAACACTCCGTTCAGCGCCGACCCTACTTTCAAGGATACCATGTTGAA
GTGGTATCCCAAGCTCCGGTTCCTGAACAATGTCGAAGTCCGTACCGCAG
AAGAAATAGCGGCGCAGAAGAAGACGCCGATTCCTGTGCAACCACCGCAC
TTCCAGGACGACTCTCAGATCGCAGAGAACTTTGTTAGGGCTTTCTTCGC
GGGCTACGACAACGACCGAAGCGGCATTCTCAACAGTGTCTACGACAACC
ACACGACGTTCACTCTCAATGTGAATACATCGGCTCCCAGGGCCCAACAA
ACAGAAACAGCGCCCTGGGATGCGTATATCAAGAAAAGCAGAAACCTTCT
CAAGATCAGCCATCTTCCTGCACGCATGTCTAGGGTATACACCGGTGCGG
AGAAAATCCGCGAGTTGTGGACTAGTCTTCCCGCGACTAGACATCCTGAC
ATTGCGACGCGCCCGGAAGAATGGCTTATCGAGTGCTACCCTATCCCGGG
TCTTCCTGATATTTCCGGGCAGAGCTCCACGGGTGTTGGTGGACTTCTCA
TCATGGTGCACGGGAAGTTCGACGAGATTAATGGGGCCAAGGTTGAAACT
CGCAGTTTCGATAGGACATTCATCATCGGGCCCGGTGGTGGTATGGGCGG
AATCAGGGTCGTCAGTGATATTCTCTGCTTGCGAGCCTATGGTGGACACG
AGGCATGGATTCCTGAGGTTCCACCAGCCGTACCCCAAGCTGCACCTCCA
GCTGCACCAGCACCAGCACCCGCAGCCCCTGCAGCCCCTGCGGCACTACC
AGTAGCCATTCCGGGTGCTCCCGAAGGCTACGGCATGCCAGCGCCTGGAA
AAGCAGACGCACAAGTCCAGCAAGAGCAGCTAGTACTTCAGATGAGCTCT
AATACTCGAATGACCCTCCAGTACTCTGAGATGGCTTTGTCTGGAAACGG
CTGGAATATGGAGGCTGCACTGAAGAACTTTGAGGAACTTAAGATGAAGG
GCGGAAAAGGATCTCGCGGTCGCTCGGGGGGTTCGGATCGTGGGGGCATC
CGCAAGCGGGGTGCTACGACCCGGGTCGACCGAGAAGGTGATCTGATGAT
GGATGCTGGCTCTGCACGAAACCGTGGAAAGAAGGTTCGTGGCGATTCTG
GCCGGTCGCAGGCAGCGAACAAAGCCATGGATGCGATCCAGAAGGCCATC
TCCAGCAACTCAGACACTCAAGCGAACATCCGACAAGGAGGACGGGGAAG
TGGTCTGGAACAGGTTATTGTTCGTGGCTGGAAACAAAGCAAGGCAGCAT
CTAACCGCGACGGCGGTCTCGAATCCCTCATCGCCTTCCTCGAGAAAAAA
CTCAGCCCACCCGACTCGAAAGCTGGCACACGCGCAAGGATTACAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0051028 | mRNA transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010172-T1.utr3p1 | KJC3_010172-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010172-T1.utr5p1 | KJC3_010172-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263MNN |
| DBxref | InterPro:IPR009060 |
| DBxref | InterPro:IPR032710 |
| DBxref | InterPro:IPR018222 |
| DBxref | InterPro:IPR032675 |
| DBxref | InterPro:IPR002075 |
| DBxref | InterPro:IPR005637 |
| DBxref | PFAM:PF03943 |
| DBxref | PFAM:PF02136 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch7 | supercontig | ch7:2551758..2554738 - |
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