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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2555027..2557164+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010173-T1 ID=KJC3_010173-T1|Name=KJC3_010173-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2138bp|location=Sequence derived from alignment at ch7:2555027..2557164+ (Aspergillus niger KJC3)
CCTGTTTCCCCAAGGACTGTCTGCTTGTTGATCGTCCTAAGTCGTGCGCA
AATCGCGACTTCCCGTCCTTGTTCATTCTCTCAATCCGACTTGGTCCGCG
TATGTTTGCCCTCGTCTTCATTCTTCCCTATCCATTGATCCTTCCTCGAA
CTATTCAGCTTACATACGGTTCTCTCCAACAGGCTTCATTCCCGCGGGCA
CTAGCTGGTCTTTAGTCGGACCAACGATCCTTTGTCTATATCCCCAAACA
CTCCTTCGTATTCATGTCGATCAATTAGAGAAATGCCGGCGAAATCGCGA
TTCACAAGGCTAGATGCCTTTGCTAAAACAGTGGAGGATGCGCGCGTCCG
TACCACATCCGGAGGTGTCATCACCATAGCCTCGTTGCTGGTCATCCTGT
GGCTTGTGTGGGGTGAATGGGCGGATTACAGGCGGGTGGTTGTTATGCCC
GAATTGGTGGTTGATAAATCAAGAGGTAAGAATGGCTTAGCGATTGCTGG
ACGGCCAGGCACGACTCGATGGCTAATGAACCCTTCGTACAGGCGAGAAG
ATGGAGATTCACCTAAACGTGACCTTCCCTCGTCTTCCCTGTGAGCTCCT
GACTCTGGACGTTATGGATGTCTCTGGCGAGCAACAGACCGGTGTTGTCC
ACGGTATCAACAAGGTGCGCCTTACTTCTGCCGCAGAAGGAGGCCGCGTC
ATCGACGTCAAGGCCCTGGAGCTGTAAGTTGCAATCTCAATCCGCTCTTG
TCAATGCCAATTGCACCGCTAACGCTGAATCCCCTAGTCACTCCAAGGAT
GAGAGTGCCAAGCACCTCGACCCCGATTACTGTGGTGAATGTTACGGCGC
GACTGCTCCCGCCGGTGCAAGCAAACCTGGATGCTGCAACACCTGCGACG
AAGTTCGTGAGGCCTACGCACAGCAGCAATGGGCATTCGGAAAGGGCGAA
AACGTTGAGCAGTGTGAGCTTGAGGGCTACGCGGAGCGCATCGATGCGCA
ACGCCGCGAGGGCTGCCGCCTTGAGGGTGTCCTCCGTGTGAACAAGGTGG
TCGGCAACTTCCACATTGCTCCGGGTCGCAGTTTCACCAGCGGAAACATG
CACGTCCATGACCTCGCGAACTTCTTCGACGCCGATCTACCTGATGCTGA
GAAACACACCATGACTCACGAGATCCACCAGCTGCGGTTCGGACCTCAGC
TTCCTGACGAGCTCTCTGATCGCTGGCAATGGACTGACCACCACCACACC
AACCCTCTGGACGGTACCAAGCAGGAGACAAACGAGCCCGGATACAACTA
CATGTACTTCGTGAAGGTGGTGTCGACCTCTTACCTCCCCCTGGGCTGGG
ATCCGCTGTTCTCGTCCTCCATCCACTCCGCTTACGACCAGGCCCCTCTT
GGCTCCCATGGCATTGCCTACGGTGCGGAGGGCAGCATCGAAACCCACCA
ATACTCTGTGACCTCGCACAAGCGCTCGCTGATGGGCGGAGACGCCTCCG
ACGAGGGCCACAAGGAGCGTCTGCACGCTGCCAACGGCATTCCAGGCGTC
TTCGTCAACTACGACATCTCCCCCATGAAAGTCATCAACCGCGAGGCCCG
TCCCAAGACCTTCACTGGTTTCTTGACTGGGGTGTGCGCCATCATCGGTG
GTACCCTGACCGTCGCGGCAGCCCTAGACCGTGGTCTCTACGAGGGTGTC
AGTAGGATGAAGAAGCTCCACTCGAACTGAGCGTAGAGCAAGCAAATACC
CGAAAAAAAAATAGTGAAACAGAACAAATAAAACCACAACCCGCTAAACA
CAAAAGAAAATACAAAGAAAGAAAACAAACAGACAGAACCCATGGAGAGC
GTTGTATGGAGTACAGGGAAAGAAGACAGACAGACAGACAGGGGACGAAA
GGGCAAGAAAGGACGGATGAAAGGGAGAACTCCGGAAGTTCAGGCGTTAC
ATTTTTCAGTCACCTACATTGATTGCATTTTTTGACCCATTTTATTTTTG
GTCGGGGGAAAACTCATTGATACACCTTTTCATCTACATCATTGGATTTT
TGGTTTACTTGGTGTTTCAATAAGCCATAGCACGTATAACAGCACGCGAG
ATCTAGCCATTGCATGGGTACTACCTACCTACAGACAG back to topCoding sequence (CDS) from alignment at ch7:2555027..2557164+ >KJC3_010173-T1 ID=KJC3_010173-T1|Name=KJC3_010173-T1|organism=Aspergillus niger KJC3|type=CDS|length=3951bp|location=Sequence derived from alignment at ch7:2555027..2557164+ (Aspergillus niger KJC3)
ATGCCGGCGAAATCGCGATTCACAAGGCTAGATGCCTTTGCTAAAACAGT
GGAGGATGCGCGCGTCCGTACCACATCCGGAGGTGTCATCACCATAGCCT
CGTTGCTGGTCATCCTGTGGCTTGTGTGGGGTGAATGGGCGGATTACAGG
CGGGTGGTTGTTATGCCCGAATTGGTGGTTGATAAATCAAGAGGCGAGAA
GATGGAGATTCACCTAAACGTGACCTTCCCTCGTCTTCCCTGTGAGCTCC
TGACTCTGGACGTTATGGATGTCTCTGGCGAGCAACAGACCGGTGTTGTC
CACGGTATCAACAAGGTGCGCCTTACTTCTGCCGCAGAAGGAGGCCGCGT
CATCGACGTCAAGGCCCTGGAGCTTCACTCCAAGGATGAGAGTGCCAAGC
ACCTCGACCCCGATTACTGTGGTGAATGTTACGGCGCGACTGCTCCCGCC
GGTGCAAGCAAACCTGGATGCTGCAACACCTGCGACGAAGTTCGTGAGGC
CTACGCACAGCAGCAATGGGCATTCGGAAAGGGCGAAAACGTTGAGCAGT
GTGAGCTTGAGGGCTACGCGGAGCGCATCGATGCGCAACGCCGCGAGGGC
TGCCGCCTTGAGGGTGTCCTCCGTGTGAACAAGGTGGTCGGCAACTTCCA
CATTGCTCCGGGTCGCAGTTTCACCAGCGGAAACATGCACGTCCATGACC
TCGCGAACTTCTTCGACGCCGATCTACCTGATGCTGAGAAACACACCATG
ACTCACGAGATCCACCAGCTGCGGTTCGGACCTCAGCTTCCTGACGAGCT
CTCTGATCGCTGGCAATGGACTGACCACCACCACACCAACCCTCTGGACG
GTACCAAGCAGGAGACAAACGAGCCCGGATACAACTACATGTACTTCGTG
AAGGTGGTGTCGACCTCTTACCTCCCCCTGGGCTGGGATCCGCTGTTCTC
GTCCTCCATCCACTCCGCTTACGACCAGGCCCCTCTTGGCTCCCATGGCA
TTGCCTACGGTGCGGAGGGCAGCATCGAAACCCACCAATACTCTGTGACC
TCGCACAAGCGCTCGCTGATGGGCGGAGACGCCTCCGACGAGGGCCACAA
GGAGCGTCTGCACGCTGCCAACGGCATTCCAGGCGTCTTCGTCAACTACG
ACATCTCCCCCATGAAAGTCATCAACCGCGAGGCCCGTCCCAAGACCTTC
ACTGGTTTCTTGACTGGGGTGTGCGCCATCATCGGTGGTACCCTGACCGT
CGCGGCAGCCCTAGACCGTGGTCTCTACGAGGGTGTCAGTAGGATGAAGA
AGCTCCACTCGAACTGAATGCCGGCGAAATCGCGATTCACAAGGCTAGAT
GCCTTTGCTAAAACAGTGGAGGATGCGCGCGTCCGTACCACATCCGGAGG
TGTCATCACCATAGCCTCGTTGCTGGTCATCCTGTGGCTTGTGTGGGGTG
AATGGGCGGATTACAGGCGGGTGGTTGTTATGCCCGAATTGGTGGTTGAT
AAATCAAGAGGCGAGAAGATGGAGATTCACCTAAACGTGACCTTCCCTCG
TCTTCCCTGTGAGCTCCTGACTCTGGACGTTATGGATGTCTCTGGCGAGC
AACAGACCGGTGTTGTCCACGGTATCAACAAGGTGCGCCTTACTTCTGCC
GCAGAAGGAGGCCGCGTCATCGACGTCAAGGCCCTGGAGCTTCACTCCAA
GGATGAGAGTGCCAAGCACCTCGACCCCGATTACTGTGGTGAATGTTACG
GCGCGACTGCTCCCGCCGGTGCAAGCAAACCTGGATGCTGCAACACCTGC
GACGAAGTTCGTGAGGCCTACGCACAGCAGCAATGGGCATTCGGAAAGGG
CGAAAACGTTGAGCAGTGTGAGCTTGAGGGCTACGCGGAGCGCATCGATG
CGCAACGCCGCGAGGGCTGCCGCCTTGAGGGTGTCCTCCGTGTGAACAAG
GTGGTCGGCAACTTCCACATTGCTCCGGGTCGCAGTTTCACCAGCGGAAA
CATGCACGTCCATGACCTCGCGAACTTCTTCGACGCCGATCTACCTGATG
CTGAGAAACACACCATGACTCACGAGATCCACCAGCTGCGGTTCGGACCT
CAGCTTCCTGACGAGCTCTCTGATCGCTGGCAATGGACTGACCACCACCA
CACCAACCCTCTGGACGGTACCAAGCAGGAGACAAACGAGCCCGGATACA
ACTACATGTACTTCGTGAAGGTGGTGTCGACCTCTTACCTCCCCCTGGGC
TGGGATCCGCTGTTCTCGTCCTCCATCCACTCCGCTTACGACCAGGCCCC
TCTTGGCTCCCATGGCATTGCCTACGGTGCGGAGGGCAGCATCGAAACCC
ACCAATACTCTGTGACCTCGCACAAGCGCTCGCTGATGGGCGGAGACGCC
TCCGACGAGGGCCACAAGGAGCGTCTGCACGCTGCCAACGGCATTCCAGG
CGTCTTCGTCAACTACGACATCTCCCCCATGAAAGTCATCAACCGCGAGG
CCCGTCCCAAGACCTTCACTGGTTTCTTGACTGGGGTGTGCGCCATCATC
GGTGGTACCCTGACCGTCGCGGCAGCCCTAGACCGTGGTCTCTACGAGGG
TGTCAGTAGGATGAAGAAGCTCCACTCGAACTGAATGCCGGCGAAATCGC
GATTCACAAGGCTAGATGCCTTTGCTAAAACAGTGGAGGATGCGCGCGTC
CGTACCACATCCGGAGGTGTCATCACCATAGCCTCGTTGCTGGTCATCCT
GTGGCTTGTGTGGGGTGAATGGGCGGATTACAGGCGGGTGGTTGTTATGC
CCGAATTGGTGGTTGATAAATCAAGAGGCGAGAAGATGGAGATTCACCTA
AACGTGACCTTCCCTCGTCTTCCCTGTGAGCTCCTGACTCTGGACGTTAT
GGATGTCTCTGGCGAGCAACAGACCGGTGTTGTCCACGGTATCAACAAGG
TGCGCCTTACTTCTGCCGCAGAAGGAGGCCGCGTCATCGACGTCAAGGCC
CTGGAGCTTCACTCCAAGGATGAGAGTGCCAAGCACCTCGACCCCGATTA
CTGTGGTGAATGTTACGGCGCGACTGCTCCCGCCGGTGCAAGCAAACCTG
GATGCTGCAACACCTGCGACGAAGTTCGTGAGGCCTACGCACAGCAGCAA
TGGGCATTCGGAAAGGGCGAAAACGTTGAGCAGTGTGAGCTTGAGGGCTA
CGCGGAGCGCATCGATGCGCAACGCCGCGAGGGCTGCCGCCTTGAGGGTG
TCCTCCGTGTGAACAAGGTGGTCGGCAACTTCCACATTGCTCCGGGTCGC
AGTTTCACCAGCGGAAACATGCACGTCCATGACCTCGCGAACTTCTTCGA
CGCCGATCTACCTGATGCTGAGAAACACACCATGACTCACGAGATCCACC
AGCTGCGGTTCGGACCTCAGCTTCCTGACGAGCTCTCTGATCGCTGGCAA
TGGACTGACCACCACCACACCAACCCTCTGGACGGTACCAAGCAGGAGAC
AAACGAGCCCGGATACAACTACATGTACTTCGTGAAGGTGGTGTCGACCT
CTTACCTCCCCCTGGGCTGGGATCCGCTGTTCTCGTCCTCCATCCACTCC
GCTTACGACCAGGCCCCTCTTGGCTCCCATGGCATTGCCTACGGTGCGGA
GGGCAGCATCGAAACCCACCAATACTCTGTGACCTCGCACAAGCGCTCGC
TGATGGGCGGAGACGCCTCCGACGAGGGCCACAAGGAGCGTCTGCACGCT
GCCAACGGCATTCCAGGCGTCTTCGTCAACTACGACATCTCCCCCATGAA
AGTCATCAACCGCGAGGCCCGTCCCAAGACCTTCACTGGTTTCTTGACTG
GGGTGTGCGCCATCATCGGTGGTACCCTGACCGTCGCGGCAGCCCTAGAC
CGTGGTCTCTACGAGGGTGTCAGTAGGATGAAGAAGCTCCACTCGAACTG
A back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010173-T1.utr5p1 | KJC3_010173-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010173-T1.utr3p1 | KJC3_010173-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012936 |
| DBxref | InterPro:IPR039542 |
| DBxref | PFAM:PF13850 |
| DBxref | PFAM:PF07970 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2555027..2557164 + |
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