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KJC3_010184-T1, KJC3_010184-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010184-T1
Unique NameKJC3_010184-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2587822..2588757+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010184-T1 ID=KJC3_010184-T1|Name=KJC3_010184-T1|organism=Aspergillus niger KJC3|type=mRNA|length=936bp|location=Sequence derived from alignment at ch7:2587822..2588757+ (Aspergillus niger KJC3)
ATTAACTCCCCCGTTCCCTCTTCAGCTTCACCACAACCACCACCACCACC
ACCACCAAAGATATAAACAAAAGAGAGAGAGAAAAGAAAAGAAAATGACC
TCTCCCCTCCCACCCCACACCCAACCCACCACCGCCACAACCACAACCAC
AACAACAACAACACCACAAGGAAATATGCACAACCACCTCCCCCGCATCA
CCATCAAATACTGCACCCAATGTAAATGGTTACTGCGCGCTGCATACGTG
AGTTTCCCACCCCCCTGCGTACCTTACATGTCCATCCGTATACATACATA
CATACACACGCACACACACATATATATATATATATATACACTAATGTAAA
TTGATTAATTAATTGATATGTGGAACAGTTCGCCCAAGAACTCCTCTCCA
CATTCAGCACCCAACTCGGCGAAGTAGCTCTCGTTCCTGCTACCGGGGGT
GTGTTTACTGTTACGATGTATCATTCTTCTTCTACTTCTACTTCTTCGAC
GGGTACGCAAGGGGAAGAGGTAGGTACAGGTACAGGTACTGGAGGTGAGG
ATGTTGATATCACTGGGACTATTCTCTGGGATAGGAAGACGAATGGGGGG
TTTCCTGGTATGTATCTTTCCTTTTTTTGTAATTCTATTGTATGGGTAGA
GATGGGATTGGGTAGGTGACTAATGGGCAATTGGCTATTTCTGTAGAAGT
CAAAGTGCTGAAAAGTCTGGTGAGGAATGTCGTCGATCCGAGTAGGGATT
TGGGACATACGGATCGGGCTTTGAGGGCTGCGAATGTGCCGGTGCAGAGT
CGGGATGGGGATGAAAAGGTCGTGGGGAAGAGTCAGGAGCAGGAGTCTAC
TACTGCTGCTGCTGCTACTGCTACGAAAGGAGAAGAGAAGTGTGAGGAGT
GTCAGTGACCGTCTACTTCCGTCAATGATAGAAGAA
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Coding sequence (CDS) from alignment at ch7:2587822..2588757+

>KJC3_010184-T1 ID=KJC3_010184-T1|Name=KJC3_010184-T1|organism=Aspergillus niger KJC3|type=CDS|length=1782bp|location=Sequence derived from alignment at ch7:2587822..2588757+ (Aspergillus niger KJC3)
ATGACCTCTCCCCTCCCACCCCACACCCAACCCACCACCGCCACAACCAC
AACCACAACAACAACAACACCACAAGGAAATATGCACAACCACCTCCCCC
GCATCACCATCAAATACTGCACCCAATGTAAATGGTTACTGCGCGCTGCA
TACTTCGCCCAAGAACTCCTCTCCACATTCAGCACCCAACTCGGCGAAGT
AGCTCTCGTTCCTGCTACCGGGGGTGTGTTTACTGTTACGATGTATCATT
CTTCTTCTACTTCTACTTCTTCGACGGGTACGCAAGGGGAAGAGGTAGGT
ACAGGTACAGGTACTGGAGGTGAGGATGTTGATATCACTGGGACTATTCT
CTGGGATAGGAAGACGAATGGGGGGTTTCCTGAAGTCAAAGTGCTGAAAA
GTCTGGTGAGGAATGTCGTCGATCCGAGTAGGGATTTGGGACATACGGAT
CGGGCTTTGAGGGCTGCGAATGTGCCGGTGCAGAGTCGGGATGGGGATGA
AAAGGTCGTGGGGAAGAGTCAGGAGCAGGAGTCTACTACTGCTGCTGCTG
CTACTGCTACGAAAGGAGAAGAGAAGTGTGAGGAGTGTCAGTGAATGACC
TCTCCCCTCCCACCCCACACCCAACCCACCACCGCCACAACCACAACCAC
AACAACAACAACACCACAAGGAAATATGCACAACCACCTCCCCCGCATCA
CCATCAAATACTGCACCCAATGTAAATGGTTACTGCGCGCTGCATACTTC
GCCCAAGAACTCCTCTCCACATTCAGCACCCAACTCGGCGAAGTAGCTCT
CGTTCCTGCTACCGGGGGTGTGTTTACTGTTACGATGTATCATTCTTCTT
CTACTTCTACTTCTTCGACGGGTACGCAAGGGGAAGAGGTAGGTACAGGT
ACAGGTACTGGAGGTGAGGATGTTGATATCACTGGGACTATTCTCTGGGA
TAGGAAGACGAATGGGGGGTTTCCTGAAGTCAAAGTGCTGAAAAGTCTGG
TGAGGAATGTCGTCGATCCGAGTAGGGATTTGGGACATACGGATCGGGCT
TTGAGGGCTGCGAATGTGCCGGTGCAGAGTCGGGATGGGGATGAAAAGGT
CGTGGGGAAGAGTCAGGAGCAGGAGTCTACTACTGCTGCTGCTGCTACTG
CTACGAAAGGAGAAGAGAAGTGTGAGGAGTGTCAGTGAATGACCTCTCCC
CTCCCACCCCACACCCAACCCACCACCGCCACAACCACAACCACAACAAC
AACAACACCACAAGGAAATATGCACAACCACCTCCCCCGCATCACCATCA
AATACTGCACCCAATGTAAATGGTTACTGCGCGCTGCATACTTCGCCCAA
GAACTCCTCTCCACATTCAGCACCCAACTCGGCGAAGTAGCTCTCGTTCC
TGCTACCGGGGGTGTGTTTACTGTTACGATGTATCATTCTTCTTCTACTT
CTACTTCTTCGACGGGTACGCAAGGGGAAGAGGTAGGTACAGGTACAGGT
ACTGGAGGTGAGGATGTTGATATCACTGGGACTATTCTCTGGGATAGGAA
GACGAATGGGGGGTTTCCTGAAGTCAAAGTGCTGAAAAGTCTGGTGAGGA
ATGTCGTCGATCCGAGTAGGGATTTGGGACATACGGATCGGGCTTTGAGG
GCTGCGAATGTGCCGGTGCAGAGTCGGGATGGGGATGAAAAGGTCGTGGG
GAAGAGTCAGGAGCAGGAGTCTACTACTGCTGCTGCTGCTACTGCTACGA
AAGGAGAAGAGAAGTGTGAGGAGTGTCAGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010184KJC3_010184Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010184-T1.utr5p1KJC3_010184-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010184-T1.exon1KJC3_010184-T1.exon1Aspergillus niger KJC3exon
KJC3_010184-T1.exon2KJC3_010184-T1.exon2Aspergillus niger KJC3exon
KJC3_010184-T1.exon3KJC3_010184-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010184-T1.cdsKJC3_010184-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010184-T1KJC3_010184-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR011893
DBxrefPFAM:PF10262
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2587822..2588757 +
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