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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2587822..2588757+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010184-T3 ID=KJC3_010184-T3|Name=KJC3_010184-T3|organism=Aspergillus niger KJC3|type=mRNA|length=936bp|location=Sequence derived from alignment at ch7:2587822..2588757+ (Aspergillus niger KJC3)
ATTAACTCCCCCGTTCCCTCTTCAGCTTCACCACAACCACCACCACCACC
ACCACCAAAGATATAAACAAAAGAGAGAGAGAAAAGAAAAGAAAATGACC
TCTCCCCTCCCACCCCACACCCAACCCACCACCGCCACAACCACAACCAC
AACAACAACAACACCACAAGGAAATATGCACAACCACCTCCCCCGCATCA
CCATCAAATACTGCACCCAATGTAAATGGTTACTGCGCGCTGCATACGTG
AGTTTCCCACCCCCCTGCGTACCTTACATGTCCATCCGTATACATACATA
CATACACACGCACACACACATATATATATATATATATACACTAATGTAAA
TTGATTAATTAATTGATATGTGGAACAGTTCGCCCAAGAACTCCTCTCCA
CATTCAGCACCCAACTCGGCGAAGTAGCTCTCGTTCCTGCTACCGGGGGT
GTGTTTACTGTTACGATGTATCATTCTTCTTCTACTTCTACTTCTTCGAC
GGGTACGCAAGGGGAAGAGGTAGGTACAGGTACAGGTACTGGAGGTGAGG
ATGTTGATATCACTGGGACTATTCTCTGGGATAGGAAGACGAATGGGGGG
TTTCCTGGTATGTATCTTTCCTTTTTTTGTAATTCTATTGTATGGGTAGA
GATGGGATTGGGTAGGTGACTAATGGGCAATTGGCTATTTCTGTAGAAGT
CAAAGTGCTGAAAAGTCTGGTGAGGAATGTCGTCGATCCGAGTAGGGATT
TGGGACATACGGATCGGGCTTTGAGGGCTGCGAATGTGCCGGTGCAGAGT
CGGGATGGGGATGAAAAGGTCGTGGGGAAGAGTCAGGAGCAGGAGTCTAC
TACTGCTGCTGCTGCTACTGCTACGAAAGGAGAAGAGAAGTGTGAGGAGT
GTCAGTGACCGTCTACTTCCGTCAATGATAGAAGAA back to topCoding sequence (CDS) from alignment at ch7:2587822..2588757+ >KJC3_010184-T3 ID=KJC3_010184-T3|Name=KJC3_010184-T3|organism=Aspergillus niger KJC3|type=CDS|length=1296bp|location=Sequence derived from alignment at ch7:2587822..2588757+ (Aspergillus niger KJC3)
ATGACCTCTCCCCTCCCACCCCACACCCAACCCACCACCGCCACAACCAC
AACCACAACAACAACAACACCACAAGGAAATATGCACAACCACCTCCCCC
GCATCACCATCAAATACTGCACCCAATGTAAATGGTTACTGCGCGCTGCA
TACTTCGCCCAAGAACTCCTCTCCACATTCAGCACCCAACTCGGCGAAGT
AGCTCTCGTTCCTGCTACCGGGGGTGTGTTTACTGTTACGATGTATCATT
CTTCTTCTACTTCTACTTCTTCGACGGGTACGCAAGGGGAAGAGGTAGGT
ACAGGTACAGGTACTGGAGGTGAGGATGTTGATATCACTGGGACTATTCT
CTGGGATAGGAAGACGAATGGGGGGTTTCCTGGAATGTCGTCGATCCGAG
TAGGGATTTGGGACATACGGATCGGGCTTTGAATGACCTCTCCCCTCCCA
CCCCACACCCAACCCACCACCGCCACAACCACAACCACAACAACAACAAC
ACCACAAGGAAATATGCACAACCACCTCCCCCGCATCACCATCAAATACT
GCACCCAATGTAAATGGTTACTGCGCGCTGCATACTTCGCCCAAGAACTC
CTCTCCACATTCAGCACCCAACTCGGCGAAGTAGCTCTCGTTCCTGCTAC
CGGGGGTGTGTTTACTGTTACGATGTATCATTCTTCTTCTACTTCTACTT
CTTCGACGGGTACGCAAGGGGAAGAGGTAGGTACAGGTACAGGTACTGGA
GGTGAGGATGTTGATATCACTGGGACTATTCTCTGGGATAGGAAGACGAA
TGGGGGGTTTCCTGGAATGTCGTCGATCCGAGTAGGGATTTGGGACATAC
GGATCGGGCTTTGAATGACCTCTCCCCTCCCACCCCACACCCAACCCACC
ACCGCCACAACCACAACCACAACAACAACAACACCACAAGGAAATATGCA
CAACCACCTCCCCCGCATCACCATCAAATACTGCACCCAATGTAAATGGT
TACTGCGCGCTGCATACTTCGCCCAAGAACTCCTCTCCACATTCAGCACC
CAACTCGGCGAAGTAGCTCTCGTTCCTGCTACCGGGGGTGTGTTTACTGT
TACGATGTATCATTCTTCTTCTACTTCTACTTCTTCGACGGGTACGCAAG
GGGAAGAGGTAGGTACAGGTACAGGTACTGGAGGTGAGGATGTTGATATC
ACTGGGACTATTCTCTGGGATAGGAAGACGAATGGGGGGTTTCCTGGAAT
GTCGTCGATCCGAGTAGGGATTTGGGACATACGGATCGGGCTTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010184-T3.utr5p1 | KJC3_010184-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010184-T3.utr3p1 | KJC3_010184-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR011893 |
| DBxref | PFAM:PF10262 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2587822..2588757 + |
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