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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2655880..2657597- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010200-T1 ID=KJC3_010200-T1|Name=KJC3_010200-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1718bp|location=Sequence derived from alignment at ch7:2655880..2657597- (Aspergillus niger KJC3)
CATTGTGCATCTTTCTCCTGCATCCTAACCGTTGCAGCTCTGACCTCCTG
GACGTCCGCGTCCCACCCAACCCTATGGCGAGCAATATCCCCGCTAGCTT
GAGATCCGCAGACATTGGGCGATACGCGTTGCGGGCAGCTCAGCTCGAAC
GCGCGAAGCCCGTTGTCGCCTACTGGTGTAAGTGCTGTTGATTGCGCATG
CTGCTGCTCAAACAGAAGCCACATGAACTGACTAACGGTTGCTTCTCAAT
TACAGGTAACTTCTGGATTGTTAATCAGATTATCGGACGGGGACTGCACA
CTTCTGACGACGATGTCAAGCAATACACAACGGACCTGGTGGACAAGTTG
GAGCAGGTACGTCGGGCGCACGACACCCCCGCTGCGATGGCGCGCAGTCC
CTGGAGACTTACACCTCTTCTCTCTGAGTTCAGTTCAAGAGTGAGAATGT
CGATAATGATGCGGTAACCGATGCGGTGGCAGCCAATGCCTACGTGGAGC
AGTTCGGATTGGAGGTCCTTGGCCGTGCGGAGGCGACTATGAAGGCCAAT
AAAGTGACCAAGTGGGTTGTTTTCGTGGGAGACTATCCGCACCACCGCTG
ACCCGTAATTAGACAGACGGCCGACACATTCCAAGCCGCTGCTACGTTTC
TCGAATTGTGTCAGATTTGGACCAACCCTCCGGAACCTGAGATCGCCGCG
AAGATCAAGTTTTGCAAGTACCATGCCGTGAGGATCATAAAGGCTATCAA
GGCGGGAGAGGATCCTAATGCGTCCAACCCGGCACCTACTGAAGAAGATG
AACTCGAAAGTGAACTTAGGGGTATGGAGGCAAAGCAGGACGATCCCGAA
GTGCAGGCCATCGTGGGATCGTCAGCCGCACCACCTGGGCAGCCTTCTGT
TGAAGAGGTCCCTGATGAGTCTACACAACCCTCACAATCACCCCTTAGTC
TCCCGCAACCTCCGACCACGTTTGCCGATGCTCCAGCTGCTCACTACGGT
GCAGACCCCATGTCTACTTCGAACATGGAGGACGATGCGGAGACAGGCGC
ACCGCTGAACCTTCCCTCGGCTCCAGAGACTTTCACTTCACCTGCTCCCT
CCGTGCCCAACCTCCCAGATACGCCCGCGGATATTGGTGCAAAACCTCCG
CAAGCTCGTGCTGACTCGTTCCACTCTTTCCCTCCCCCGTCATCCATTCC
GCCTTCGAGCCCGTCGGCAGCATCTCACGATGCAAGCTCGTTCTACACCA
GACCGACAAGCGGTGTCGCTCCGCCTCCACCGTTTGTACAGTCTTCCTCT
GCGACAGCACCTGTAGTTTCTCGCCCTACTCCTCAAAGTATCCCGTCATC
CACACCACCTCCACCTGCACCTGCCGCTTCTAGTTCCAGTGGGGTGAACG
CTCAGTCACTTGACGATCAAGCTATAGCTCTTGCTCAGAAGCATGCCCGC
TGGGCCGTGTCAGCCTTGACATTCGACGACGTCAACACCGCGATTAAAGA
GCTGAAGAATTCACTGCGTTATCTCGGTGCAGAGTGAAATGATGTGAGAT
GAGTGTCTGGGACTGACGTATTTGAAAGCTGAGAAGCATAGAAAAACCCT
AACCTGACTAAGCCATGAATATCAAGACCATATTATGACAAGAGCTCATG
CTACATCCAACCTGATAGTGTACAGTAATGATGATGGACCACTTCATATC
TTTTCAACAATGTAGTTC back to topCoding sequence (CDS) from alignment at ch7:2655880..2657597- >KJC3_010200-T1 ID=KJC3_010200-T1|Name=KJC3_010200-T1|organism=Aspergillus niger KJC3|type=CDS|length=5028bp|location=Sequence derived from alignment at ch7:2655880..2657597- (Aspergillus niger KJC3)
ACAGACGGCCGACACATTCCAAGCCGCTGCTACGTTTCTCGAATTGTGTC
AGATTTGGACCAACCCTCCGGAACCTGAGATCGCCGCGAAGATCAAGTTT
TGCAAGTACCATGCCGTGAGGATCATAAAGGCTATCAAGGCGGGAGAGGA
TCCTAATGCGTCCAACCCGGCACCTACTGAAGAAGATGAACTCGAAAGTG
AACTTAGGGGTATGGAGGCAAAGCAGGACGATCCCGAAGTGCAGGCCATC
GTGGGATCGTCAGCCGCACCACCTGGGCAGCCTTCTGTTGAAGAGGTCCC
TGATGAGTCTACACAACCCTCACAATCACCCCTTAGTCTCCCGCAACCTC
CGACCACGTTTGCCGATGCTCCAGCTGCTCACTACGGTGCAGACCCCATG
TCTACTTCGAACATGGAGGACGATGCGGAGACAGGCGCACCGCTGAACCT
TCCCTCGGCTCCAGAGACTTTCACTTCACCTGCTCCCTCCGTGCCCAACC
TCCCAGATACGCCCGCGGATATTGGTGCAAAACCTCCGCAAGCTCGTGCT
GACTCGTTCCACTCTTTCCCTCCCCCGTCATCCATTCCGCCTTCGAGCCC
GTCGGCAGCATCTCACGATGCAAGCTCGTTCTACACCAGACCGACAAGCG
GTGTCGCTCCGCCTCCACCGTTTGTACAGTCTTCCTCTGCGACAGCACCT
GTAGTTTCTCGCCCTACTCCTCAAAGTATCCCGTCATCCACACCACCTCC
ACCTGCACCTGCCGCTTCTAGTTCCAGTGGGGTGAACGCTCAGTCACTTG
ACGATCAAGCTATAGCTCTTGCTCAGAAGCATGCCCGCTGGGCCGTGTCA
GCCTTGACATTCGACGACGTCAACACCGCGATTAAAGAGCTGAAGAATTC
ACTGCGTTATCTCGGTGCAGAGTGATTCAAGAGTGAGAATGTCGATAATG
ATGCGGTAACCGATGCGGTGGCAGCCAATGCCTACGTGGAGCAGTTCGGA
TTGGAGGTCCTTGGCCGTGCGGAGGCGACTATGAAGGCCAATAAAGTGAC
CAAGTAACTTCTGGATTGTTAATCAGATTATCGGACGGGGACTGCACACT
TCTGACGACGATGTCAAGCAATACACAACGGACCTGGTGGACAAGTTGGA
GCAGATGGCGAGCAATATCCCCGCTAGCTTGAGATCCGCAGACATTGGGC
GATACGCGTTGCGGGCAGCTCAGCTCGAACGCGCGAAGCCCGTTGTCGCC
TACTGGTACAGACGGCCGACACATTCCAAGCCGCTGCTACGTTTCTCGAA
TTGTGTCAGATTTGGACCAACCCTCCGGAACCTGAGATCGCCGCGAAGAT
CAAGTTTTGCAAGTACCATGCCGTGAGGATCATAAAGGCTATCAAGGCGG
GAGAGGATCCTAATGCGTCCAACCCGGCACCTACTGAAGAAGATGAACTC
GAAAGTGAACTTAGGGGTATGGAGGCAAAGCAGGACGATCCCGAAGTGCA
GGCCATCGTGGGATCGTCAGCCGCACCACCTGGGCAGCCTTCTGTTGAAG
AGGTCCCTGATGAGTCTACACAACCCTCACAATCACCCCTTAGTCTCCCG
CAACCTCCGACCACGTTTGCCGATGCTCCAGCTGCTCACTACGGTGCAGA
CCCCATGTCTACTTCGAACATGGAGGACGATGCGGAGACAGGCGCACCGC
TGAACCTTCCCTCGGCTCCAGAGACTTTCACTTCACCTGCTCCCTCCGTG
CCCAACCTCCCAGATACGCCCGCGGATATTGGTGCAAAACCTCCGCAAGC
TCGTGCTGACTCGTTCCACTCTTTCCCTCCCCCGTCATCCATTCCGCCTT
CGAGCCCGTCGGCAGCATCTCACGATGCAAGCTCGTTCTACACCAGACCG
ACAAGCGGTGTCGCTCCGCCTCCACCGTTTGTACAGTCTTCCTCTGCGAC
AGCACCTGTAGTTTCTCGCCCTACTCCTCAAAGTATCCCGTCATCCACAC
CACCTCCACCTGCACCTGCCGCTTCTAGTTCCAGTGGGGTGAACGCTCAG
TCACTTGACGATCAAGCTATAGCTCTTGCTCAGAAGCATGCCCGCTGGGC
CGTGTCAGCCTTGACATTCGACGACGTCAACACCGCGATTAAAGAGCTGA
AGAATTCACTGCGTTATCTCGGTGCAGAGTGATTCAAGAGTGAGAATGTC
GATAATGATGCGGTAACCGATGCGGTGGCAGCCAATGCCTACGTGGAGCA
GTTCGGATTGGAGGTCCTTGGCCGTGCGGAGGCGACTATGAAGGCCAATA
AAGTGACCAAGTAACTTCTGGATTGTTAATCAGATTATCGGACGGGGACT
GCACACTTCTGACGACGATGTCAAGCAATACACAACGGACCTGGTGGACA
AGTTGGAGCAGATGGCGAGCAATATCCCCGCTAGCTTGAGATCCGCAGAC
ATTGGGCGATACGCGTTGCGGGCAGCTCAGCTCGAACGCGCGAAGCCCGT
TGTCGCCTACTGGTACAGACGGCCGACACATTCCAAGCCGCTGCTACGTT
TCTCGAATTGTGTCAGATTTGGACCAACCCTCCGGAACCTGAGATCGCCG
CGAAGATCAAGTTTTGCAAGTACCATGCCGTGAGGATCATAAAGGCTATC
AAGGCGGGAGAGGATCCTAATGCGTCCAACCCGGCACCTACTGAAGAAGA
TGAACTCGAAAGTGAACTTAGGGGTATGGAGGCAAAGCAGGACGATCCCG
AAGTGCAGGCCATCGTGGGATCGTCAGCCGCACCACCTGGGCAGCCTTCT
GTTGAAGAGGTCCCTGATGAGTCTACACAACCCTCACAATCACCCCTTAG
TCTCCCGCAACCTCCGACCACGTTTGCCGATGCTCCAGCTGCTCACTACG
GTGCAGACCCCATGTCTACTTCGAACATGGAGGACGATGCGGAGACAGGC
GCACCGCTGAACCTTCCCTCGGCTCCAGAGACTTTCACTTCACCTGCTCC
CTCCGTGCCCAACCTCCCAGATACGCCCGCGGATATTGGTGCAAAACCTC
CGCAAGCTCGTGCTGACTCGTTCCACTCTTTCCCTCCCCCGTCATCCATT
CCGCCTTCGAGCCCGTCGGCAGCATCTCACGATGCAAGCTCGTTCTACAC
CAGACCGACAAGCGGTGTCGCTCCGCCTCCACCGTTTGTACAGTCTTCCT
CTGCGACAGCACCTGTAGTTTCTCGCCCTACTCCTCAAAGTATCCCGTCA
TCCACACCACCTCCACCTGCACCTGCCGCTTCTAGTTCCAGTGGGGTGAA
CGCTCAGTCACTTGACGATCAAGCTATAGCTCTTGCTCAGAAGCATGCCC
GCTGGGCCGTGTCAGCCTTGACATTCGACGACGTCAACACCGCGATTAAA
GAGCTGAAGAATTCACTGCGTTATCTCGGTGCAGAGTGATTCAAGAGTGA
GAATGTCGATAATGATGCGGTAACCGATGCGGTGGCAGCCAATGCCTACG
TGGAGCAGTTCGGATTGGAGGTCCTTGGCCGTGCGGAGGCGACTATGAAG
GCCAATAAAGTGACCAAGTAACTTCTGGATTGTTAATCAGATTATCGGAC
GGGGACTGCACACTTCTGACGACGATGTCAAGCAATACACAACGGACCTG
GTGGACAAGTTGGAGCAGATGGCGAGCAATATCCCCGCTAGCTTGAGATC
CGCAGACATTGGGCGATACGCGTTGCGGGCAGCTCAGCTCGAACGCGCGA
AGCCCGTTGTCGCCTACTGGTACAGACGGCCGACACATTCCAAGCCGCTG
CTACGTTTCTCGAATTGTGTCAGATTTGGACCAACCCTCCGGAACCTGAG
ATCGCCGCGAAGATCAAGTTTTGCAAGTACCATGCCGTGAGGATCATAAA
GGCTATCAAGGCGGGAGAGGATCCTAATGCGTCCAACCCGGCACCTACTG
AAGAAGATGAACTCGAAAGTGAACTTAGGGGTATGGAGGCAAAGCAGGAC
GATCCCGAAGTGCAGGCCATCGTGGGATCGTCAGCCGCACCACCTGGGCA
GCCTTCTGTTGAAGAGGTCCCTGATGAGTCTACACAACCCTCACAATCAC
CCCTTAGTCTCCCGCAACCTCCGACCACGTTTGCCGATGCTCCAGCTGCT
CACTACGGTGCAGACCCCATGTCTACTTCGAACATGGAGGACGATGCGGA
GACAGGCGCACCGCTGAACCTTCCCTCGGCTCCAGAGACTTTCACTTCAC
CTGCTCCCTCCGTGCCCAACCTCCCAGATACGCCCGCGGATATTGGTGCA
AAACCTCCGCAAGCTCGTGCTGACTCGTTCCACTCTTTCCCTCCCCCGTC
ATCCATTCCGCCTTCGAGCCCGTCGGCAGCATCTCACGATGCAAGCTCGT
TCTACACCAGACCGACAAGCGGTGTCGCTCCGCCTCCACCGTTTGTACAG
TCTTCCTCTGCGACAGCACCTGTAGTTTCTCGCCCTACTCCTCAAAGTAT
CCCGTCATCCACACCACCTCCACCTGCACCTGCCGCTTCTAGTTCCAGTG
GGGTGAACGCTCAGTCACTTGACGATCAAGCTATAGCTCTTGCTCAGAAG
CATGCCCGCTGGGCCGTGTCAGCCTTGACATTCGACGACGTCAACACCGC
GATTAAAGAGCTGAAGAATTCACTGCGTTATCTCGGTGCAGAGTGATTCA
AGAGTGAGAATGTCGATAATGATGCGGTAACCGATGCGGTGGCAGCCAAT
GCCTACGTGGAGCAGTTCGGATTGGAGGTCCTTGGCCGTGCGGAGGCGAC
TATGAAGGCCAATAAAGTGACCAAGTAACTTCTGGATTGTTAATCAGATT
ATCGGACGGGGACTGCACACTTCTGACGACGATGTCAAGCAATACACAAC
GGACCTGGTGGACAAGTTGGAGCAGATGGCGAGCAATATCCCCGCTAGCT
TGAGATCCGCAGACATTGGGCGATACGCGTTGCGGGCAGCTCAGCTCGAA
CGCGCGAAGCCCGTTGTCGCCTACTGGT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010200-T1.utr3p1 | KJC3_010200-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010200-T1.utr5p1 | KJC3_010200-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR039431 |
| DBxref | InterPro:IPR023175 |
| DBxref | InterPro:IPR041212 |
| DBxref | PFAM:PF18097 |
| DBxref | PFAM:PF04652 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2655880..2657597 - |
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