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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2655880..2657597- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010200-T2 ID=KJC3_010200-T2|Name=KJC3_010200-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1718bp|location=Sequence derived from alignment at ch7:2655880..2657597- (Aspergillus niger KJC3)
CATTGTGCATCTTTCTCCTGCATCCTAACCGTTGCAGCTCTGACCTCCTG
GACGTCCGCGTCCCACCCAACCCTATGGCGAGCAATATCCCCGCTAGCTT
GAGATCCGCAGACATTGGGCGATACGCGTTGCGGGCAGCTCAGCTCGAAC
GCGCGAAGCCCGTTGTCGCCTACTGGTGTAAGTGCTGTTGATTGCGCATG
CTGCTGCTCAAACAGAAGCCACATGAACTGACTAACGGTTGCTTCTCAAT
TACAGGTAACTTCTGGATTGTTAATCAGATTATCGGACGGGGACTGCACA
CTTCTGACGACGATGTCAAGCAATACACAACGGACCTGGTGGACAAGTTG
GAGCAGGTACGTCGGGCGCACGACACCCCCGCTGCGATGGCGCGCAGTCC
CTGGAGACTTACACCTCTTCTCTCTGAGTTCAGTTCAAGAGTGAGAATGT
CGATAATGATGCGGTAACCGATGCGGTGGCAGCCAATGCCTACGTGGAGC
AGTTCGGATTGGAGGTCCTTGGCCGTGCGGAGGCGACTATGAAGGCCAAT
AAAGTGACCAAGTGGGTTGTTTTCGTGGGAGACTATCCGCACCACCGCTG
ACCCGTAATTAGACAGACGGCCGACACATTCCAAGCCGCTGCTACGTTTC
TCGAATTGTGTCAGATTTGGACCAACCCTCCGGAACCTGAGATCGCCGCG
AAGATCAAGTTTTGCAAGTACCATGCCGTGAGGATCATAAAGGCTATCAA
GGCGGGAGAGGATCCTAATGCGTCCAACCCGGCACCTACTGAAGAAGATG
AACTCGAAAGTGAACTTAGGGGTATGGAGGCAAAGCAGGACGATCCCGAA
GTGCAGGCCATCGTGGGATCGTCAGCCGCACCACCTGGGCAGCCTTCTGT
TGAAGAGGTCCCTGATGAGTCTACACAACCCTCACAATCACCCCTTAGTC
TCCCGCAACCTCCGACCACGTTTGCCGATGCTCCAGCTGCTCACTACGGT
GCAGACCCCATGTCTACTTCGAACATGGAGGACGATGCGGAGACAGGCGC
ACCGCTGAACCTTCCCTCGGCTCCAGAGACTTTCACTTCACCTGCTCCCT
CCGTGCCCAACCTCCCAGATACGCCCGCGGATATTGGTGCAAAACCTCCG
CAAGCTCGTGCTGACTCGTTCCACTCTTTCCCTCCCCCGTCATCCATTCC
GCCTTCGAGCCCGTCGGCAGCATCTCACGATGCAAGCTCGTTCTACACCA
GACCGACAAGCGGTGTCGCTCCGCCTCCACCGTTTGTACAGTCTTCCTCT
GCGACAGCACCTGTAGTTTCTCGCCCTACTCCTCAAAGTATCCCGTCATC
CACACCACCTCCACCTGCACCTGCCGCTTCTAGTTCCAGTGGGGTGAACG
CTCAGTCACTTGACGATCAAGCTATAGCTCTTGCTCAGAAGCATGCCCGC
TGGGCCGTGTCAGCCTTGACATTCGACGACGTCAACACCGCGATTAAAGA
GCTGAAGAATTCACTGCGTTATCTCGGTGCAGAGTGAAATGATGTGAGAT
GAGTGTCTGGGACTGACGTATTTGAAAGCTGAGAAGCATAGAAAAACCCT
AACCTGACTAAGCCATGAATATCAAGACCATATTATGACAAGAGCTCATG
CTACATCCAACCTGATAGTGTACAGTAATGATGATGGACCACTTCATATC
TTTTCAACAATGTAGTTC back to topCoding sequence (CDS) from alignment at ch7:2655880..2657597- >KJC3_010200-T2 ID=KJC3_010200-T2|Name=KJC3_010200-T2|organism=Aspergillus niger KJC3|type=CDS|length=1896bp|location=Sequence derived from alignment at ch7:2655880..2657597- (Aspergillus niger KJC3)
ACAGACGGCCGACACATTCCAAGCCGCTGCTACGTTTCTCGAATTGTGTC
AGATTTGGACCAACCCTCCGGAACCTGAGATCGCCGCGAAGATCAAGTTT
TGCAAGTACCATGCCGTGAGGATCATAAAGGCTATCAAGGCGGGAGAGGA
TCCTAATGCGTCCAACCCGGCACCTACTGAAGAAGATGAACTCGAAAGTG
AACTTAGGGGTATGGAGGCAAAGCAGGACGATCCCGAAGTGCAGGCCATC
GTGGGATCGTCAGCCGCACCACCTGGGCAGCCTTCTGTTGAAGAGGTCCC
TGATGAGTCTACACAACCCTCACAATCACCCCTTAGTCTCCCGCAACCTC
CGACCACGTTTGCCGATGCTCCAGCTGCTCACTACGGTGCAGACCCCATG
TCTACTTCGAACATGGAGGACGATGCGGAGACAGGCGCACCGCTGAACCT
TCCCTCGGCTCCAGAGACTTTCACTTCACCTGCTCCCTCCGTGCCCAACC
TCCCAGATACGCCCGCGGATATTGGTGCAAAACCTCCGCAAGCTCGTGCT
GACTCGTTCCACTCTTTCCCTCCCCCGTCATCCATTCCGCCTTCGAGCCC
GTCGGCAGCATCTCACGATGCAAGCTCGTTCTACACCAGACCGACAAGCG
GTGTCGCTCCGCCTCCACCGTTTGTACAGTCTTCCTCTGCGACAGCACCT
GTAGTTTCTCGCCCTACTCCTCAAAGTATCCCGTCATCCACACCACCTCC
ACCTGCACCTGCCGCTTCTAGTTCCAGTGGGGTGAACGCTCAGTCACTTG
ACGATCAAGCTATAGCTCTTGCTCAGAAGCATGCCCGCTGGGCCGTGTCA
GCCTTGACATTCGACGACGTCAACACCGCGATTAAAGAGCTGAAGAATTC
ACTGCGTTATCTCGGTGCAGAGTGAATGAAGGCCAATAAAGTGACCAAAC
AGACGGCCGACACATTCCAAGCCGCTGCTACGTTTCTCGAATTGTGTCAG
ATTTGGACCAACCCTCCGGAACCTGAGATCGCCGCGAAGATCAAGTTTTG
CAAGTACCATGCCGTGAGGATCATAAAGGCTATCAAGGCGGGAGAGGATC
CTAATGCGTCCAACCCGGCACCTACTGAAGAAGATGAACTCGAAAGTGAA
CTTAGGGGTATGGAGGCAAAGCAGGACGATCCCGAAGTGCAGGCCATCGT
GGGATCGTCAGCCGCACCACCTGGGCAGCCTTCTGTTGAAGAGGTCCCTG
ATGAGTCTACACAACCCTCACAATCACCCCTTAGTCTCCCGCAACCTCCG
ACCACGTTTGCCGATGCTCCAGCTGCTCACTACGGTGCAGACCCCATGTC
TACTTCGAACATGGAGGACGATGCGGAGACAGGCGCACCGCTGAACCTTC
CCTCGGCTCCAGAGACTTTCACTTCACCTGCTCCCTCCGTGCCCAACCTC
CCAGATACGCCCGCGGATATTGGTGCAAAACCTCCGCAAGCTCGTGCTGA
CTCGTTCCACTCTTTCCCTCCCCCGTCATCCATTCCGCCTTCGAGCCCGT
CGGCAGCATCTCACGATGCAAGCTCGTTCTACACCAGACCGACAAGCGGT
GTCGCTCCGCCTCCACCGTTTGTACAGTCTTCCTCTGCGACAGCACCTGT
AGTTTCTCGCCCTACTCCTCAAAGTATCCCGTCATCCACACCACCTCCAC
CTGCACCTGCCGCTTCTAGTTCCAGTGGGGTGAACGCTCAGTCACTTGAC
GATCAAGCTATAGCTCTTGCTCAGAAGCATGCCCGCTGGGCCGTGTCAGC
CTTGACATTCGACGACGTCAACACCGCGATTAAAGAGCTGAAGAATTCAC
TGCGTTATCTCGGTGCAGAGTGAATGAAGGCCAATAAAGTGACCAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010200-T2.utr3p1 | KJC3_010200-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR039431 |
| DBxref | InterPro:IPR041212 |
| DBxref | InterPro:IPR023175 |
| DBxref | PFAM:PF18097 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2655880..2657597 - |
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