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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2666456..2668540+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010205-T1 ID=KJC3_010205-T1|Name=KJC3_010205-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2085bp|location=Sequence derived from alignment at ch7:2666456..2668540+ (Aspergillus niger KJC3)
GGATCAAGCAACGGCTGAGCATCTCAATAGCGTTCATATCGCTGTTGGAA
AAAAAACAAGATGATCCGGCAAGACTTCTGCAGAATTGACCCGAAGAGAA
GGGCAACCCTCGACCACAAAAAGAAACAATTCGCGACCCCGGTCTTCAAG
CAACAGGACTATCCGCATCGCTTAAACTTCTATGAGGTCCCCCCGACCGA
CGAGATCACTCTCGAACAATTTGAGCAATGGGCTATTGATCGATTGAAAG
GTTACTGAATCTCCGATCTTAGTGTATCATATATACTCACAATGTTCGAC
AGTCTTGGCTGAGATTGAAGCCTGTTCTTATCGAAACAAGTCGCCGGCAG
AGACCGAAGCGCATATCACTCCTCACCTCCAGAAATATCTCCCTCTATCC
TCCAACACATCCTCCTCTAACGGCGCTGCGGATCAACGATTGAAGAATGA
ACGCCAGAAAGATCACTATTCTCACTTTATTCTACGCCTGGCATTCTCGG
CCACAGAGGAACTCCGTCGGCGTTTCGTGAGAGCAGAGACTATGCTTTTC
AGGTTCCGCTTCCAACGCGACGACACCAGAGAACGCCGCGCCTTCATCGA
GAGCCTTAATCTGGACTGGGAGCCTGTGGATGATGAGGAAAAACAGAGAC
TGGCGGAACAATTACTCGCCGCTTCCCCGGGTCTACGTCGCATTGATGAT
GAGACCTGGTACAAGGTGGACTGGGAGAAAGTCCCGGAGTTGGTAGAGAG
ACGGGCTGTTTTCCTATCCAAGGGGAAAGCATATGTGCCCGGTAGGGAGC
AATTGAGCATGATCATAGCAGAATTTACGGCTCGATTGGAGCGCGCTCTT
GAGGTATGTCAGAGCAGTAGATATGGACTGTTTTATGGTACTGACATCTC
CCAGCTCACAAGTCGGGCGTTGCCGCGCTTGGATGAAGATGATCGCCTCA
CTCCAATTTTGAATCACCTCTCGAAGAACTTTGGAAGTGCCGAGTCGGTA
TACACGGAAAACGAGGGATTTGTTGATGGCGCCCCGATCACTGCGAACAA
CATTGATCGACTATCTCAGCATTTCCCACTATGCATGCGCAGTCTTCACA
TGAACCTACGCAAGAACAACCACTTGAAGCACTACGGACGACTGCAATAT
ACCCTCTTCCTCAAAGGAATTGGGCTGTCGCTGGAAGAGTGCATTGTTTT
CTGGCGCCAAGGCTTCAAAGGGCTCACTGACGACGAATTCAACTCGCGGT
ACAAGTACAATATCCGCCACGCTTACGGCGATGTGGGCGGTGATCAGAAC
CGCAGAGGCCGGGGATACCCTCCGTACTCCTGCCAGAAGATCTTGGGTGA
CTCGAATCCGGGAGTCGGACAGACCCATGGCTGTCCGTACCGCCACTTCT
CTGTCGATAACTTGATCGGTCTTCTTCAGTCCACAGGAGTCAATGACAGA
GACGTCCTACGTGGAGTGCGAGAGGATGTTGAGAAGATGCGTTTCCATAT
TGCTTGCAACAGGGTCTTCGAACATACCCACAAAGCAGATATCAAGAGAG
TGAAGGAAGACGGTACATGGAACCAAACTGACCTCGACACCATCGTGCAC
CCCAATACCTACTTCAAGCGCAGCTATCTCTTGAAGCAAATGGGGAAGGC
ACCAAAGAATGCCTAACATCACTGATAGGTCCACGAAGCCACGTTCCTTT
CTTGCATTTTTGTTGTCGGTTTGCGGATATTCCACCATGCGGGCGTTCCG
GGTCAGGCTGTTTTTGGAAATGGGTAGACGCTATTGATCCCACATTTCAT
AGGTAGATATTTTATGTATAAATTAAGAGCATGGAATGCACCGAAACATT
TAATACAGAGCGCACATCAATTGCTCTTTTTACACGTAAATCGTAAATCT
ACTATAGTAGCGGTGATAGAAGGGCATATGACCACAGCTGATTCCCAGAT
TATCCAAAAGGAACAAAACGTCCTTTCAAAGCCAGGTGCCCAGCAACGGG
TCTAATTTACTCTTCGCTCGACACTTTAGACAAAATCACCAACTGGGTGG
ATGGAAGCTGCCATAGAAAATGAAAGGAGTCGGCG back to topCoding sequence (CDS) from alignment at ch7:2666456..2668540+ >KJC3_010205-T1 ID=KJC3_010205-T1|Name=KJC3_010205-T1|organism=Aspergillus niger KJC3|type=CDS|length=4509bp|location=Sequence derived from alignment at ch7:2666456..2668540+ (Aspergillus niger KJC3)
ATGATCCGGCAAGACTTCTGCAGAATTGACCCGAAGAGAAGGGCAACCCT
CGACCACAAAAAGAAACAATTCGCGACCCCGGTCTTCAAGCAACAGGACT
ATCCGCATCGCTTAAACTTCTATGAGGTCCCCCCGACCGACGAGATCACT
CTCGAACAATTTGAGCAATGGGCTATTGATCGATTGAAAGTCTTGGCTGA
GATTGAAGCCTGTTCTTATCGAAACAAGTCGCCGGCAGAGACCGAAGCGC
ATATCACTCCTCACCTCCAGAAATATCTCCCTCTATCCTCCAACACATCC
TCCTCTAACGGCGCTGCGGATCAACGATTGAAGAATGAACGCCAGAAAGA
TCACTATTCTCACTTTATTCTACGCCTGGCATTCTCGGCCACAGAGGAAC
TCCGTCGGCGTTTCGTGAGAGCAGAGACTATGCTTTTCAGGTTCCGCTTC
CAACGCGACGACACCAGAGAACGCCGCGCCTTCATCGAGAGCCTTAATCT
GGACTGGGAGCCTGTGGATGATGAGGAAAAACAGAGACTGGCGGAACAAT
TACTCGCCGCTTCCCCGGGTCTACGTCGCATTGATGATGAGACCTGGTAC
AAGGTGGACTGGGAGAAAGTCCCGGAGTTGGTAGAGAGACGGGCTGTTTT
CCTATCCAAGGGGAAAGCATATGTGCCCGGTAGGGAGCAATTGAGCATGA
TCATAGCAGAATTTACGGCTCGATTGGAGCGCGCTCTTGAGCTCACAAGT
CGGGCGTTGCCGCGCTTGGATGAAGATGATCGCCTCACTCCAATTTTGAA
TCACCTCTCGAAGAACTTTGGAAGTGCCGAGTCGGTATACACGGAAAACG
AGGGATTTGTTGATGGCGCCCCGATCACTGCGAACAACATTGATCGACTA
TCTCAGCATTTCCCACTATGCATGCGCAGTCTTCACATGAACCTACGCAA
GAACAACCACTTGAAGCACTACGGACGACTGCAATATACCCTCTTCCTCA
AAGGAATTGGGCTGTCGCTGGAAGAGTGCATTGTTTTCTGGCGCCAAGGC
TTCAAAGGGCTCACTGACGACGAATTCAACTCGCGGTACAAGTACAATAT
CCGCCACGCTTACGGCGATGTGGGCGGTGATCAGAACCGCAGAGGCCGGG
GATACCCTCCGTACTCCTGCCAGAAGATCTTGGGTGACTCGAATCCGGGA
GTCGGACAGACCCATGGCTGTCCGTACCGCCACTTCTCTGTCGATAACTT
GATCGGTCTTCTTCAGTCCACAGGAGTCAATGACAGAGACGTCCTACGTG
GAGTGCGAGAGGATGTTGAGAAGATGCGTTTCCATATTGCTTGCAACAGG
GTCTTCGAACATACCCACAAAGCAGATATCAAGAGAGTGAAGGAAGACGG
TACATGGAACCAAACTGACCTCGACACCATCGTGCACCCCAATACCTACT
TCAAGCGCAGCTATCTCTTGAAGCAAATGGGGAAGGCACCAAAGAATGCC
TAAATGATCCGGCAAGACTTCTGCAGAATTGACCCGAAGAGAAGGGCAAC
CCTCGACCACAAAAAGAAACAATTCGCGACCCCGGTCTTCAAGCAACAGG
ACTATCCGCATCGCTTAAACTTCTATGAGGTCCCCCCGACCGACGAGATC
ACTCTCGAACAATTTGAGCAATGGGCTATTGATCGATTGAAAGTCTTGGC
TGAGATTGAAGCCTGTTCTTATCGAAACAAGTCGCCGGCAGAGACCGAAG
CGCATATCACTCCTCACCTCCAGAAATATCTCCCTCTATCCTCCAACACA
TCCTCCTCTAACGGCGCTGCGGATCAACGATTGAAGAATGAACGCCAGAA
AGATCACTATTCTCACTTTATTCTACGCCTGGCATTCTCGGCCACAGAGG
AACTCCGTCGGCGTTTCGTGAGAGCAGAGACTATGCTTTTCAGGTTCCGC
TTCCAACGCGACGACACCAGAGAACGCCGCGCCTTCATCGAGAGCCTTAA
TCTGGACTGGGAGCCTGTGGATGATGAGGAAAAACAGAGACTGGCGGAAC
AATTACTCGCCGCTTCCCCGGGTCTACGTCGCATTGATGATGAGACCTGG
TACAAGGTGGACTGGGAGAAAGTCCCGGAGTTGGTAGAGAGACGGGCTGT
TTTCCTATCCAAGGGGAAAGCATATGTGCCCGGTAGGGAGCAATTGAGCA
TGATCATAGCAGAATTTACGGCTCGATTGGAGCGCGCTCTTGAGCTCACA
AGTCGGGCGTTGCCGCGCTTGGATGAAGATGATCGCCTCACTCCAATTTT
GAATCACCTCTCGAAGAACTTTGGAAGTGCCGAGTCGGTATACACGGAAA
ACGAGGGATTTGTTGATGGCGCCCCGATCACTGCGAACAACATTGATCGA
CTATCTCAGCATTTCCCACTATGCATGCGCAGTCTTCACATGAACCTACG
CAAGAACAACCACTTGAAGCACTACGGACGACTGCAATATACCCTCTTCC
TCAAAGGAATTGGGCTGTCGCTGGAAGAGTGCATTGTTTTCTGGCGCCAA
GGCTTCAAAGGGCTCACTGACGACGAATTCAACTCGCGGTACAAGTACAA
TATCCGCCACGCTTACGGCGATGTGGGCGGTGATCAGAACCGCAGAGGCC
GGGGATACCCTCCGTACTCCTGCCAGAAGATCTTGGGTGACTCGAATCCG
GGAGTCGGACAGACCCATGGCTGTCCGTACCGCCACTTCTCTGTCGATAA
CTTGATCGGTCTTCTTCAGTCCACAGGAGTCAATGACAGAGACGTCCTAC
GTGGAGTGCGAGAGGATGTTGAGAAGATGCGTTTCCATATTGCTTGCAAC
AGGGTCTTCGAACATACCCACAAAGCAGATATCAAGAGAGTGAAGGAAGA
CGGTACATGGAACCAAACTGACCTCGACACCATCGTGCACCCCAATACCT
ACTTCAAGCGCAGCTATCTCTTGAAGCAAATGGGGAAGGCACCAAAGAAT
GCCTAAATGATCCGGCAAGACTTCTGCAGAATTGACCCGAAGAGAAGGGC
AACCCTCGACCACAAAAAGAAACAATTCGCGACCCCGGTCTTCAAGCAAC
AGGACTATCCGCATCGCTTAAACTTCTATGAGGTCCCCCCGACCGACGAG
ATCACTCTCGAACAATTTGAGCAATGGGCTATTGATCGATTGAAAGTCTT
GGCTGAGATTGAAGCCTGTTCTTATCGAAACAAGTCGCCGGCAGAGACCG
AAGCGCATATCACTCCTCACCTCCAGAAATATCTCCCTCTATCCTCCAAC
ACATCCTCCTCTAACGGCGCTGCGGATCAACGATTGAAGAATGAACGCCA
GAAAGATCACTATTCTCACTTTATTCTACGCCTGGCATTCTCGGCCACAG
AGGAACTCCGTCGGCGTTTCGTGAGAGCAGAGACTATGCTTTTCAGGTTC
CGCTTCCAACGCGACGACACCAGAGAACGCCGCGCCTTCATCGAGAGCCT
TAATCTGGACTGGGAGCCTGTGGATGATGAGGAAAAACAGAGACTGGCGG
AACAATTACTCGCCGCTTCCCCGGGTCTACGTCGCATTGATGATGAGACC
TGGTACAAGGTGGACTGGGAGAAAGTCCCGGAGTTGGTAGAGAGACGGGC
TGTTTTCCTATCCAAGGGGAAAGCATATGTGCCCGGTAGGGAGCAATTGA
GCATGATCATAGCAGAATTTACGGCTCGATTGGAGCGCGCTCTTGAGCTC
ACAAGTCGGGCGTTGCCGCGCTTGGATGAAGATGATCGCCTCACTCCAAT
TTTGAATCACCTCTCGAAGAACTTTGGAAGTGCCGAGTCGGTATACACGG
AAAACGAGGGATTTGTTGATGGCGCCCCGATCACTGCGAACAACATTGAT
CGACTATCTCAGCATTTCCCACTATGCATGCGCAGTCTTCACATGAACCT
ACGCAAGAACAACCACTTGAAGCACTACGGACGACTGCAATATACCCTCT
TCCTCAAAGGAATTGGGCTGTCGCTGGAAGAGTGCATTGTTTTCTGGCGC
CAAGGCTTCAAAGGGCTCACTGACGACGAATTCAACTCGCGGTACAAGTA
CAATATCCGCCACGCTTACGGCGATGTGGGCGGTGATCAGAACCGCAGAG
GCCGGGGATACCCTCCGTACTCCTGCCAGAAGATCTTGGGTGACTCGAAT
CCGGGAGTCGGACAGACCCATGGCTGTCCGTACCGCCACTTCTCTGTCGA
TAACTTGATCGGTCTTCTTCAGTCCACAGGAGTCAATGACAGAGACGTCC
TACGTGGAGTGCGAGAGGATGTTGAGAAGATGCGTTTCCATATTGCTTGC
AACAGGGTCTTCGAACATACCCACAAAGCAGATATCAAGAGAGTGAAGGA
AGACGGTACATGGAACCAAACTGACCTCGACACCATCGTGCACCCCAATA
CCTACTTCAAGCGCAGCTATCTCTTGAAGCAAATGGGGAAGGCACCAAAG
AATGCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006269 | DNA replication, synthesis of RNA primer |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010205-T1.utr5p1 | KJC3_010205-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010205-T1.utr3p1 | KJC3_010205-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092626HU |
| DBxref | InterPro:IPR007238 |
| DBxref | InterPro:IPR016558 |
| DBxref | PFAM:PF04104 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2666456..2668540 + |
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