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KJC3_010213-T1, KJC3_010213-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010213-T1
Unique NameKJC3_010213-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2717861..2719704+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010213-T1 ID=KJC3_010213-T1|Name=KJC3_010213-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1844bp|location=Sequence derived from alignment at ch7:2717861..2719704+ (Aspergillus niger KJC3)
CTCTTCTTCTCTGTTTTATTGCCATCGAGCTTTGTTAAAGATACTCTACT
CTGATTTTCATTTTGTTTTGGCATTACATCCAATACCCGCCTCTTCCGAC
TAAGTTTCCTCCCTCAATGGAGGTAGCTAGCGCGCAACAGCCTTCTCTTC
AACTAGACGCCTCCAACGCTGCCCCGGTTGCTGACACAATGGACGCCTCC
ATGGATATTGACATGGACATTGATCTTGGACCCCTTCCAGAAGCAGAACC
AATTGAGACTGTGAGTATTACTATTGTCTGATCTATTACAGGTTCCAGTC
GTCCACTCCTAACGTCTTCGTCGACTGTCCAGGAACAAACTCTCGTGGCA
ACGACTGCTGTTCAAGATGGATCCATCGACCCTCTTAATGAGGAGGCACA
GTATGAAAAGGTTCATATACGCGGTGTAGATGAGTTGACGACAGACAACA
TCAAACAATTCGCTGTCGAACACTTCGCCCTTGAGGAGCCAAGCCGCGTT
GAATGGATCGATGACACATCAGCGAACATCCTATACTCTTCGCCGGAGGT
TGGTCTTCAAGCTCTGTCAGCATTTACGCAGGTTAGCGAGGAGGAGGATG
CATCCGCGTTGCCTGCTCTACGGTTGCGATCCGCGAAGCTCCTCTCTACC
CACCCCGACTCTGTGCTCCAGGTTAGGTCAGCTGTCAAGGCGGATCGCAA
AAAGCCTCGTGCGCACGAAGCCAGTCGGTTTTACCTCATGCACCCTGAAC
ATGACCCTCGGGAACGCTTGCGACGAGAATTTGCAGATAGGCGACGCTCG
GGAGGTGGAGACGTCAGTGACGGGGATTATAGACGAAGACGGTTTGATGG
TCGAGAACTGCAACGTCGGAGAGACCGTGATGCAGGCGAGAGCTTCAGTG
CCAATATGTATGATGACACGGTGCCTGCCAGCCGCGACCGCTCGTCGGAC
CGCAGTCGCGAAAGGCGGGGAAGACGAGGGGGGCGCGATCTATTCCCACA
GGAAGAAGGACGATTGTCTGGTCGCCTTCGCAACCGTAGCGCGTCACCCG
GTCGAGATACACTGATGGAAGGCGGGTATGCTGAGGACGATCGGCAGGAT
CGCAGACGGTTCCGCGACCGGTCGCCCCAGCTCGGTCGCCGCAATGAAGG
CAAGGAGCTCTTCCCATCCTCGGGAGCCAAAAGCAGCGATGCAAATGCGC
GGGAGCTCTTCCCGAACCGAACAGCCAAGGAACTCTTTCCTCAAAAAGTT
AGCAATCATCGCCGTTCAGACGCGATCGATGGCGCAGATGAGACGGCAGA
TCTCTTCTCGCGGAGGATTTCAGTGCCTCTTGTTGATGGCAGCCAAGACC
AACAACCTGCGCGCCGAAAGCGCGACATTGAGCTTTTCCCTGAGACGACC
GAGACAAGCGGTCTCAACATCCGCGGGGCAGCAAGGCAGGATCAGGGAAT
GTCGATTCGTGGTGCGGCAAATGGCATCTCAATCAAAGGACGGGGCGCGT
CTGTTCGTGAACTGTTCCCTAATAAATACGGTTCCAACGCAGGCAAGGAG
TTGTTTTCCGATAAGATTGAGGGGCGAGGAGGACCACGACGCAGGGCGGA
GGACATGTTTAGCTGAGGGCTTAGGTTCGGGCAGACCTTTTTGCAAGCAA
CATGTCATGTTGCTATGTGTATAATTTGCCTGACTGGTTTCTCTTTGGTT
GTCGCTCGGCTTTTGCTTGGATGGTGGTGCGCAAAGTTCGATAAAATCGG
CTGACATCGGTGATACCAATCTTTCCTTCTATATATATTTTATTCTTTTG
TACTTCAGCCTATGCCCAATGAGAACATCCTACCTCTCTACTAG
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Coding sequence (CDS) from alignment at ch7:2717861..2719704+

>KJC3_010213-T1 ID=KJC3_010213-T1|Name=KJC3_010213-T1|organism=Aspergillus niger KJC3|type=CDS|length=2856bp|location=Sequence derived from alignment at ch7:2717861..2719704+ (Aspergillus niger KJC3)
ATGGAGGTAGCTAGCGCGCAACAGCCTTCTCTTCAACTAGACGCCTCCAA
CGCTGCCCCGGTTGCTGACACAATGGACGCCTCCATGGATATTGACATGG
ACATTGATCTTGGACCCCTTCCAGAAGCAGAACCAATTGAGACTGAACAA
ACTCTCGTGGCAACGACTGCTGTTCAAGATGGATCCATCGACCCTCTTAA
TGAGGAGGCACAGTATGAAAAGGTTCATATACGCGGTGTAGATGAGTTGA
CGACAGACAACATCAAACAATTCGCTGTCGAACACTTCGCCCTTGAGGAG
CCAAGCCGCGTTGAATGGATCGATGACACATCAGCGAACATCCTATACTC
TTCGCCGGAGGTTGGTCTTCAAGCTCTGTCAGCATTTACGCAGGTTAGCG
AGGAGGAGGATGCATCCGCGTTGCCTGCTCTACGGTTGCGATCCGCGAAG
CTCCTCTCTACCCACCCCGACTCTGTGCTCCAGGTTAGGTCAGCTGTCAA
GGCGGATCGCAAAAAGCCTCGTGCGCACGAAGCCAGTCGGTTTTACCTCA
TGCACCCTGAACATGACCCTCGGGAACGCTTGCGACGAGAATTTGCAGAT
AGGCGACGCTCGGGAGGTGGAGACGTCAGTGACGGGGATTATAGACGAAG
ACGGTTTGATGGTCGAGAACTGCAACGTCGGAGAGACCGTGATGCAGGCG
AGAGCTTCAGTGCCAATATGTATGATGACACGGTGCCTGCCAGCCGCGAC
CGCTCGTCGGACCGCAGTCGCGAAAGGCGGGGAAGACGAGGGGGGCGCGA
TCTATTCCCACAGGAAGAAGGACGATTGTCTGGTCGCCTTCGCAACCGTA
GCGCGTCACCCGGTCGAGATACACTGATGGAAGGCGGGTATGCTGAGGAC
GATCGGCAGGATCGCAGACGGTTCCGCGACCGGTCGCCCCAGCTCGGTCG
CCGCAATGAAGGCAAGGAGCTCTTCCCATCCTCGGGAGCCAAAAGCAGCG
ATGCAAATGCGCGGGAGCTCTTCCCGAACCGAACAGCCAAGGAACTCTTT
CCTCAAAAAGTTAGCAATCATCGCCGTTCAGACGCGATCGATGGCGCAGA
TGAGACGGCAGATCTCTTCTCGCGGAGGATTTCAGTGCCTCTTGTTGATG
GCAGCCAAGACCAACAACCTGCGCGCCGAAAGCGCGACATTGAGCTTTTC
CCTGAGACGACCGAGACAAGCGGTCTCAACATCCGCGGGGCAGCAAGGCA
GGATCAGGGAATGTCGATTCGTGGTGCGGCAAATGGCATCTCAATCAAAG
GACGGGGCGCGTCTGTTCGTGAACTGTTCCCTAATAAATACGGTTCCAAC
GCAGGCAAGGAGTTGTTTTCCGATAAGATTGAGGGGCGAGGAGGACCACG
ACGCAGGGCGGAGGACATGTTTAGCTGAATGGAGGTAGCTAGCGCGCAAC
AGCCTTCTCTTCAACTAGACGCCTCCAACGCTGCCCCGGTTGCTGACACA
ATGGACGCCTCCATGGATATTGACATGGACATTGATCTTGGACCCCTTCC
AGAAGCAGAACCAATTGAGACTGAACAAACTCTCGTGGCAACGACTGCTG
TTCAAGATGGATCCATCGACCCTCTTAATGAGGAGGCACAGTATGAAAAG
GTTCATATACGCGGTGTAGATGAGTTGACGACAGACAACATCAAACAATT
CGCTGTCGAACACTTCGCCCTTGAGGAGCCAAGCCGCGTTGAATGGATCG
ATGACACATCAGCGAACATCCTATACTCTTCGCCGGAGGTTGGTCTTCAA
GCTCTGTCAGCATTTACGCAGGTTAGCGAGGAGGAGGATGCATCCGCGTT
GCCTGCTCTACGGTTGCGATCCGCGAAGCTCCTCTCTACCCACCCCGACT
CTGTGCTCCAGGTTAGGTCAGCTGTCAAGGCGGATCGCAAAAAGCCTCGT
GCGCACGAAGCCAGTCGGTTTTACCTCATGCACCCTGAACATGACCCTCG
GGAACGCTTGCGACGAGAATTTGCAGATAGGCGACGCTCGGGAGGTGGAG
ACGTCAGTGACGGGGATTATAGACGAAGACGGTTTGATGGTCGAGAACTG
CAACGTCGGAGAGACCGTGATGCAGGCGAGAGCTTCAGTGCCAATATGTA
TGATGACACGGTGCCTGCCAGCCGCGACCGCTCGTCGGACCGCAGTCGCG
AAAGGCGGGGAAGACGAGGGGGGCGCGATCTATTCCCACAGGAAGAAGGA
CGATTGTCTGGTCGCCTTCGCAACCGTAGCGCGTCACCCGGTCGAGATAC
ACTGATGGAAGGCGGGTATGCTGAGGACGATCGGCAGGATCGCAGACGGT
TCCGCGACCGGTCGCCCCAGCTCGGTCGCCGCAATGAAGGCAAGGAGCTC
TTCCCATCCTCGGGAGCCAAAAGCAGCGATGCAAATGCGCGGGAGCTCTT
CCCGAACCGAACAGCCAAGGAACTCTTTCCTCAAAAAGTTAGCAATCATC
GCCGTTCAGACGCGATCGATGGCGCAGATGAGACGGCAGATCTCTTCTCG
CGGAGGATTTCAGTGCCTCTTGTTGATGGCAGCCAAGACCAACAACCTGC
GCGCCGAAAGCGCGACATTGAGCTTTTCCCTGAGACGACCGAGACAAGCG
GTCTCAACATCCGCGGGGCAGCAAGGCAGGATCAGGGAATGTCGATTCGT
GGTGCGGCAAATGGCATCTCAATCAAAGGACGGGGCGCGTCTGTTCGTGA
ACTGTTCCCTAATAAATACGGTTCCAACGCAGGCAAGGAGTTGTTTTCCG
ATAAGATTGAGGGGCGAGGAGGACCACGACGCAGGGCGGAGGACATGTTT
AGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000340RNA 7-methylguanosine cap binding
GO:0003729mRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010213KJC3_010213Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010213-T1.utr5p1KJC3_010213-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010213-T1.exon1KJC3_010213-T1.exon1Aspergillus niger KJC3exon
KJC3_010213-T1.exon2KJC3_010213-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010213-T1.cdsKJC3_010213-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010213-T1.utr3p1KJC3_010213-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010213-T1KJC3_010213-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019416
DBxrefPFAM:PF10309
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2717861..2719704 +
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