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KJC3_010214-T1, KJC3_010214-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010214-T1
Unique NameKJC3_010214-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2719710..2721408+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010214-T1 ID=KJC3_010214-T1|Name=KJC3_010214-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1699bp|location=Sequence derived from alignment at ch7:2719710..2721408+ (Aspergillus niger KJC3)
GTATCTTCATGAAGCGTAGTGCTCAGGAGGTCTGTTTGCGCAGGCCACTT
TCAATCCGGTGTCGGAAACATAGATCTGGCTCGAGTGGAGCGATGAAGCT
ACTAGCCCGATATATATATCTTTCCCCCAGTTATCGCTCGACAAAGTACA
TTCCGTTGCTCAACCCCAGCCCAACCTCCAAAATGCCACCCCCATCGCAA
AATATCCCACTAGCCAGCACCCTCGTGGCCCGTTTTCTACGGACAAACAA
TTACACGCAAACACTCAAAGCTTTCCTGCAAGAAGCGGGGCTCCCGTCCG
ACGCGGGAGAACAGAGCGGCAAAGACGATGCCACCAACTGGACCATCGAG
AATCTGATCGAGGAGAAGAAAGCCTATGACCAAAGTAAGAACTTCGAGAG
ATATGGTGACAATGACAAGGACAAAGATGTCTGGACCGTTCCAGGTCTGT
GTAACACCTTCATGCCCCGCTAGAAGCTAGAAACTAACCTGCTCTTACAG
CACCCACCAAGCCCAACATCATCCAAACGCCAAGCAGTTCAAACCTACTG
GCATGCTCCGTTGGGCAATGGCAAAGGCCAGATGCACAAGCAGAGCCATA
TCTGATCGCCACCGGCGCAGACAAGCACCTCCATCTCTTCCAAACATCTC
CTGGCCATGACCTCGTCCAGTCATTCACGGGCACATCAGAGGCCCCAATT
CTATCGTATATCCCGGTCCAAGATGGGAAATACATCCTCATGACCAATAT
GTCAGGCCAGCTTCTTCTGCAAAAAGGCGCAGAAATCATAGACCGCCGCA
AGGACCACGCCAAATACGCGGTCAAAGTCATCGCCTACGAACAGAAGAAC
AACAACGACACAGCAGACACCTTTTCCACCACTACGACAATCTGGATTGC
AACAGCAGGCTGGGACTCCAAGATCTTCCTCTACCGCATGCAGATTAACG
ATGAAGCCCCTACGCAAATCGGTGACCCCATTGCCTCCATCCCATTACTC
TCCAATCCCGAATCCATCCTCTTCACCACCCACATCGACAACCCTCAGGA
CCTAATCCTCCTCGTCTCCCGCCGCGACTCAAGCAACCTATACTACTACC
ATGTCAAACCGTCAGCGGTCTCAACCACCGGATACGAATGCCCTCTCATC
GGTAAACAAAACCTCGCCCCGCACTCCAACGCCTGGGTCGCCTTCTCCCC
CTCCTGTCTGGCCCTCAGCCCTCATGACCCGGGACTCATAGCCATCGCAA
CATCAACTCTTCCGCATATGAAAGTTATGATTGTGCGGTTGCTCTTCCCC
TCAGCAGAGAGCTTGGAGTCAGGCTCGGCGGAGCAGGAACAGGAGCCAGC
AACGCAAGCGGCGCAGGCTTTCGCTGCCCTGTCGCTGCAGAATCGCGAGG
ACGCCGCGATTCTGATCCAGGCGAATACGTTTGCGCCGCAGACGGCGTAC
TCGACGCCACAGGTTGTGTGGAGACCGGATGGGTCGGGGGTGTGGGTTAA
TGGGGATGATGGGGTTGTGAGGGGGTTGGAGGTGAAGACGGGGAAGGTTG
TGACGTTGTTGAAGGATGGGCATGAGGTTGGGTGTAAGATTAGGACGCTT
TGGGCGGGGTGGGTTGATGGGGAGAATGGGGGTGAGAGGGAGGAGTGGTT
GGTTAGTGGGGGGTTTGATAAGAGGTTGGTCGTTTGGAAGGTTGAGTGA
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Coding sequence (CDS) from alignment at ch7:2719710..2721408+

>KJC3_010214-T1 ID=KJC3_010214-T1|Name=KJC3_010214-T1|organism=Aspergillus niger KJC3|type=CDS|length=3270bp|location=Sequence derived from alignment at ch7:2719710..2721408+ (Aspergillus niger KJC3)
ATGAAGCGTAGTGCTCAGGAGGTCTGTTTGCGCAGGCCACTTTCAATCCG
GTGTCGGAAACATAGATCTGGCTCGAGTGGAGCGATGAAGCTACTAGCCC
GATATATATATCTTTCCCCCAGTTATCGCTCGACAAAGTACATTCCGTTG
CTCAACCCCAGCCCAACCTCCAAAATGCCACCCCCATCGCAAAATATCCC
ACTAGCCAGCACCCTCGTGGCCCGTTTTCTACGGACAAACAATTACACGC
AAACACTCAAAGCTTTCCTGCAAGAAGCGGGGCTCCCGTCCGACGCGGGA
GAACAGAGCGGCAAAGACGATGCCACCAACTGGACCATCGAGAATCTGAT
CGAGGAGAAGAAAGCCTATGACCAAAGTAAGAACTTCGAGAGATATGGTG
ACAATGACAAGGACAAAGATGTCTGGACCGTTCCAGCACCCACCAAGCCC
AACATCATCCAAACGCCAAGCAGTTCAAACCTACTGGCATGCTCCGTTGG
GCAATGGCAAAGGCCAGATGCACAAGCAGAGCCATATCTGATCGCCACCG
GCGCAGACAAGCACCTCCATCTCTTCCAAACATCTCCTGGCCATGACCTC
GTCCAGTCATTCACGGGCACATCAGAGGCCCCAATTCTATCGTATATCCC
GGTCCAAGATGGGAAATACATCCTCATGACCAATATGTCAGGCCAGCTTC
TTCTGCAAAAAGGCGCAGAAATCATAGACCGCCGCAAGGACCACGCCAAA
TACGCGGTCAAAGTCATCGCCTACGAACAGAAGAACAACAACGACACAGC
AGACACCTTTTCCACCACTACGACAATCTGGATTGCAACAGCAGGCTGGG
ACTCCAAGATCTTCCTCTACCGCATGCAGATTAACGATGAAGCCCCTACG
CAAATCGGTGACCCCATTGCCTCCATCCCATTACTCTCCAATCCCGAATC
CATCCTCTTCACCACCCACATCGACAACCCTCAGGACCTAATCCTCCTCG
TCTCCCGCCGCGACTCAAGCAACCTATACTACTACCATGTCAAACCGTCA
GCGGTCTCAACCACCGGATACGAATGCCCTCTCATCGGTAAACAAAACCT
CGCCCCGCACTCCAACGCCTGGGTCGCCTTCTCCCCCTCCTGTCTGGCCC
TCAGCCCTCATGACCCGGGACTCATAGCCATCGCAACATCAACTCTTCCG
CATATGAAAGTTATGATTGTGCGGTTGCTCTTCCCCTCAGCAGAGAGCTT
GGAGTCAGGCTCGGCGGAGCAGGAACAGGAGCCAGCAACGCAAGCGGCGC
AGGCTTTCGCTGCCCTGTCGCTGCAGAATCGCGAGGACGCCGCGATTCTG
ATCCAGGCGAATACGTTTGCGCCGCAGACGGCGTACTCGACGCCACAGGT
TGTGTGGAGACCGGATGGGTCGGGGGTGTGGGTTAATGGGGATGATGGGG
TTGTGAGGGGGTTGGAGGTGAAGACGGGGAAGGTTGTGACGTTGTTGAAG
GATGGGCATGAGGTTGGGTGTAAGATTAGGACGCTTTGGGCGGGGTGGGT
TGATGGGGAGAATGGGGGTGAGAGGGAGGAGTGGTTGGTTAGTGGGGGGT
TTGATAAGAGGTTGGTCGTTTGGAAGGTTGAGTGAATGAAGCGTAGTGCT
CAGGAGGTCTGTTTGCGCAGGCCACTTTCAATCCGGTGTCGGAAACATAG
ATCTGGCTCGAGTGGAGCGATGAAGCTACTAGCCCGATATATATATCTTT
CCCCCAGTTATCGCTCGACAAAGTACATTCCGTTGCTCAACCCCAGCCCA
ACCTCCAAAATGCCACCCCCATCGCAAAATATCCCACTAGCCAGCACCCT
CGTGGCCCGTTTTCTACGGACAAACAATTACACGCAAACACTCAAAGCTT
TCCTGCAAGAAGCGGGGCTCCCGTCCGACGCGGGAGAACAGAGCGGCAAA
GACGATGCCACCAACTGGACCATCGAGAATCTGATCGAGGAGAAGAAAGC
CTATGACCAAAGTAAGAACTTCGAGAGATATGGTGACAATGACAAGGACA
AAGATGTCTGGACCGTTCCAGCACCCACCAAGCCCAACATCATCCAAACG
CCAAGCAGTTCAAACCTACTGGCATGCTCCGTTGGGCAATGGCAAAGGCC
AGATGCACAAGCAGAGCCATATCTGATCGCCACCGGCGCAGACAAGCACC
TCCATCTCTTCCAAACATCTCCTGGCCATGACCTCGTCCAGTCATTCACG
GGCACATCAGAGGCCCCAATTCTATCGTATATCCCGGTCCAAGATGGGAA
ATACATCCTCATGACCAATATGTCAGGCCAGCTTCTTCTGCAAAAAGGCG
CAGAAATCATAGACCGCCGCAAGGACCACGCCAAATACGCGGTCAAAGTC
ATCGCCTACGAACAGAAGAACAACAACGACACAGCAGACACCTTTTCCAC
CACTACGACAATCTGGATTGCAACAGCAGGCTGGGACTCCAAGATCTTCC
TCTACCGCATGCAGATTAACGATGAAGCCCCTACGCAAATCGGTGACCCC
ATTGCCTCCATCCCATTACTCTCCAATCCCGAATCCATCCTCTTCACCAC
CCACATCGACAACCCTCAGGACCTAATCCTCCTCGTCTCCCGCCGCGACT
CAAGCAACCTATACTACTACCATGTCAAACCGTCAGCGGTCTCAACCACC
GGATACGAATGCCCTCTCATCGGTAAACAAAACCTCGCCCCGCACTCCAA
CGCCTGGGTCGCCTTCTCCCCCTCCTGTCTGGCCCTCAGCCCTCATGACC
CGGGACTCATAGCCATCGCAACATCAACTCTTCCGCATATGAAAGTTATG
ATTGTGCGGTTGCTCTTCCCCTCAGCAGAGAGCTTGGAGTCAGGCTCGGC
GGAGCAGGAACAGGAGCCAGCAACGCAAGCGGCGCAGGCTTTCGCTGCCC
TGTCGCTGCAGAATCGCGAGGACGCCGCGATTCTGATCCAGGCGAATACG
TTTGCGCCGCAGACGGCGTACTCGACGCCACAGGTTGTGTGGAGACCGGA
TGGGTCGGGGGTGTGGGTTAATGGGGATGATGGGGTTGTGAGGGGGTTGG
AGGTGAAGACGGGGAAGGTTGTGACGTTGTTGAAGGATGGGCATGAGGTT
GGGTGTAAGATTAGGACGCTTTGGGCGGGGTGGGTTGATGGGGAGAATGG
GGGTGAGAGGGAGGAGTGGTTGGTTAGTGGGGGGTTTGATAAGAGGTTGG
TCGTTTGGAAGGTTGAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010214KJC3_010214Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010214-T1.utr5p1KJC3_010214-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010214-T1.exon1KJC3_010214-T1.exon1Aspergillus niger KJC3exon
KJC3_010214-T1.exon2KJC3_010214-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010214-T1.cdsKJC3_010214-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010214-T1KJC3_010214-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR006594
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2719710..2721408 +
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