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KJC3_010228-T1, KJC3_010228-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010228-T1
Unique NameKJC3_010228-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2759545..2762296-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010228-T1 ID=KJC3_010228-T1|Name=KJC3_010228-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2752bp|location=Sequence derived from alignment at ch7:2759545..2762296- (Aspergillus niger KJC3)
CTTCCTTCATTCAATTCATCCAACTAGTTAGTAATTTACTTCCTTTTTTC
TCATCTTGTTTTTTTTCCTGGCTCCATCACTTCTTCTTCGGCCACTCAAG
CTCAATAGTGAGTCTCCATCTTTTCTTATCCATCACTGTTGATCATGCAT
GACATATCATCATCAGCCTGCTTGGACCCCGTCCTTCCTCGATTCCTCAA
CTGCGATCACTACCACCTTCTCCTCCCCATCTGCCTTTGCCAGCTCGTCC
AAGTTGACCCATCCCAGTCTTCTCCAGGCATCAGGCCCGGATTTCCCTCG
CAAGCTCTCCAGCACCAACTGCGCCCCCTTTTAATTCGTCAGCGGATGCA
TCGGTGGCTTTCGTCTATTTTCACTCTGCTTTCTGGCCTCGTTCCACTAA
TCTTATCCTCACGGGTCCTACTGTCCTCTCTGTTTCCATTTCCTCGGACA
TTCTTACTGCCTTTGCTATTCTTATTCTGGCCCTCCTTACTCTACCTGCC
GCGGTTGCTGCTGCTGCTCCTTCAGCACCGACCTCAACACTTTTCGCCAT
CGGTGGGCCTCTTTCGATGTAGGAGGTCGATCAACCCGGGCGCTTGTCTT
CCTGTCTTGACATAAAACCCACGAAGCACTGGTCTTCGATCTCTTATTTT
TCCTGTGGATCGGCTTCTTTATTTCAAACAGTACGTGATTGTCTGATTAG
CGATCGGGGTTGTCAAGGACGAACCAGTAAGCATAGTCCCCTTGGGCATC
ATTGGTCATACCCGGGCATGAGACCGTCAGACCAAACCCCGATACTTATA
TTCTAGCTTCTAGGCCACTACCCCCCCTGCTAACTCCGTCCATCTTGCGC
ATTGAAGCTTAAAGGACTCGGAACTAGTCCGTTTGATAGAAGATCACAAG
CTTTTAAACTCACGGGGTCCACCTCCTCTTCATTCATTCTCCGAAATCTC
AGGGGATCTGACATATCGAACCCTACTATACCACACTATCATGCCTTTCC
CTCCACGCGAGAAGGGGCGGATGGCAAAATCTGGAAGGTCAGAAGAGGAA
TTTGTTCTATTCCTCCAGGGGGTATGTCTCGCACGTGGTACATCTCATAC
ACGCGGCCTTGTCTAACCATGGGTGCAGATACCGGCGCACTGTCGTTGGC
AAGAGCTCAAGGACCTAGTCCGCCAGACAGCCTTACATATCCGTCAAGCA
GTGGTCTACGATGACCAGCATGGATTCCCAACCGGTCTTGGACAGATCAT
CGTGAAGAACGAAGACGAAGCATGGAGGACCTACCGTGCGTCATGAAACT
CAGATGGTTAGAAATTAGCTGACAGGGTGCTTCTAGATAGGCTTTCTACC
AACGGCTGGGAAGGCCAGAGCCTTGTTGTCACTTTAGCACGAACCAGCTC
ACCTACACGACCAATTGCTGGGCCCACGAAGAGTCCAACCTGCGTAATTC
CGCCCAACTATGTACCAGGCTACTCAACTCCGCCACGATCAACACAAAAC
ATGGCAGTGCCTCCGTCTCCCATTTCCCCCGAGTAAGTACAGGAAGTGGC
TCCCCTTCTTCCTCAGGCGACAACTGACAACTCATAGACCTATCTTGTCT
GCCAGTCCAAGCTGCCCGACATATCCAGCCACTGATTACGGCCCCATGGT
CAATCCCCTAGCAATGCCTCAACAGCCTTTCATGCCTTTCCCCACAGACC
CAGTCACACAACAGCCCATATCAGGCATCCCGCCCTCGCCCGCTCCTCTC
CGCCACTCCTTCGGCGACGCTTTCGCTATTCCCGTCTTCCCCGCATATCC
TTTTCCGACCATGCCGCCGTTTCCTGATGCCCCAGCACATGGCGGTTTTA
GTCTACCCGGACGTCGGGCCCACATGTCCGGCAAAGCTTCCTACGGCTAC
AATCCGGCGTTCGCGCCGCAGATCTACCATTCCGGGGGCCCAGGTCCCCG
TTCTTCCCCACGACGAACTATATTCGTGCAGAATCTCAGTCCCACCACGA
CCGACAAGCTCCTTCGCGCCTTCATAGAAGAAAGTGGCGCCACAGTGGAG
CAATCCGAGGTGTCCACGGATCCCGACACCGGCCGCTGTAAAGGCTTCGC
ACGGGTAACCCTACGCACAGCAGATGAAGCCAAGCGTGTTGTAGCGCAGT
ACAACGGCATCAACTTTATGGACGCGAAAATTCGCGTCAAGATCGACCGG
AGTCTCCATCTCGCTTACAGCCTGACCCGCGAGAGACATGCCGGTTCGGC
ACCATCAGCTAACGCGAACAGTCCGGTCGCAAAGAACCAAGGACCATATG
GTGCTGGCAACAGCCCGAGGTCATCATCGCTGTCTTCATCGACGTCAACG
TCGTCGAAATCGGGCGACCACTGTGGACCCCTAGTCGTCAATGGGTCCAA
CACGGGAACCAAGGCAGTGGCTACTTAGCCGCACACATTCCATCACTACT
TCTGACGGAAGTATTGACTGGCCGGCCTATATAGTAATAGTCGATAAACA
GATATCTTATCATCATCATCATTGTTTTCTGCAGAGGGTAAGGACGGGAT
AGAACGGGATCATGGGGTTGAATCAGTCTATGTTTGATGTGCTCTGGAAT
TGGATGTGATCATAGTTACATGTGCATGATCGTTTTATTCTTATATCTCT
ACTTATGTGCAAGGTTTCCAATGACTGCCAGAGTGAGATTTACGGCGTCC
CGGGGCGTTCAAACGGTGATTACATACATAACATAGATAGAATGATTGGT
TG
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Coding sequence (CDS) from alignment at ch7:2759545..2762296-

>KJC3_010228-T1 ID=KJC3_010228-T1|Name=KJC3_010228-T1|organism=Aspergillus niger KJC3|type=CDS|length=5100bp|location=Sequence derived from alignment at ch7:2759545..2762296- (Aspergillus niger KJC3)
ACCTATCTTGTCTGCCAGTCCAAGCTGCCCGACATATCCAGCCACTGATT
ACGGCCCCATGGTCAATCCCCTAGCAATGCCTCAACAGCCTTTCATGCCT
TTCCCCACAGACCCAGTCACACAACAGCCCATATCAGGCATCCCGCCCTC
GCCCGCTCCTCTCCGCCACTCCTTCGGCGACGCTTTCGCTATTCCCGTCT
TCCCCGCATATCCTTTTCCGACCATGCCGCCGTTTCCTGATGCCCCAGCA
CATGGCGGTTTTAGTCTACCCGGACGTCGGGCCCACATGTCCGGCAAAGC
TTCCTACGGCTACAATCCGGCGTTCGCGCCGCAGATCTACCATTCCGGGG
GCCCAGGTCCCCGTTCTTCCCCACGACGAACTATATTCGTGCAGAATCTC
AGTCCCACCACGACCGACAAGCTCCTTCGCGCCTTCATAGAAGAAAGTGG
CGCCACAGTGGAGCAATCCGAGGTGTCCACGGATCCCGACACCGGCCGCT
GTAAAGGCTTCGCACGGGTAACCCTACGCACAGCAGATGAAGCCAAGCGT
GTTGTAGCGCAGTACAACGGCATCAACTTTATGGACGCGAAAATTCGCGT
CAAGATCGACCGGAGTCTCCATCTCGCTTACAGCCTGACCCGCGAGAGAC
ATGCCGGTTCGGCACCATCAGCTAACGCGAACAGTCCGGTCGCAAAGAAC
CAAGGACCATATGGTGCTGGCAACAGCCCGAGGTCATCATCGCTGTCTTC
ATCGACGTCAACGTCGTCGAAATCGGGCGACCACTGTGGACCCCTAGTCG
TCAATGGGTCCAACACGGGAACCAAGGCAGTGGCTACTTAGATAGGCTTT
CTACCAACGGCTGGGAAGGCCAGAGCCTTGTTGTCACTTTAGCACGAACC
AGCTCACCTACACGACCAATTGCTGGGCCCACGAAGAGTCCAACCTGCGT
AATTCCGCCCAACTATGTACCAGGCTACTCAACTCCGCCACGATCAACAC
AAAACATGGCAGTGCCTCCGTCTCCCATTTCCCCCGAATACCGGCGCACT
GTCGTTGGCAAGAGCTCAAGGACCTAGTCCGCCAGACAGCCTTACATATC
CGTCAAGCAGTGGTCTACGATGACCAGCATGGATTCCCAACCGGTCTTGG
ACAGATCATCGTGAAGAACGAAGACGAAGCATGGAGGACCTACCATGCCT
TTCCCTCCACGCGAGAAGGGGCGGATGGCAAAATCTGGAAGGTCAGAAGA
GGAATTTGTTCTATTCCTCCAGGGGACCTATCTTGTCTGCCAGTCCAAGC
TGCCCGACATATCCAGCCACTGATTACGGCCCCATGGTCAATCCCCTAGC
AATGCCTCAACAGCCTTTCATGCCTTTCCCCACAGACCCAGTCACACAAC
AGCCCATATCAGGCATCCCGCCCTCGCCCGCTCCTCTCCGCCACTCCTTC
GGCGACGCTTTCGCTATTCCCGTCTTCCCCGCATATCCTTTTCCGACCAT
GCCGCCGTTTCCTGATGCCCCAGCACATGGCGGTTTTAGTCTACCCGGAC
GTCGGGCCCACATGTCCGGCAAAGCTTCCTACGGCTACAATCCGGCGTTC
GCGCCGCAGATCTACCATTCCGGGGGCCCAGGTCCCCGTTCTTCCCCACG
ACGAACTATATTCGTGCAGAATCTCAGTCCCACCACGACCGACAAGCTCC
TTCGCGCCTTCATAGAAGAAAGTGGCGCCACAGTGGAGCAATCCGAGGTG
TCCACGGATCCCGACACCGGCCGCTGTAAAGGCTTCGCACGGGTAACCCT
ACGCACAGCAGATGAAGCCAAGCGTGTTGTAGCGCAGTACAACGGCATCA
ACTTTATGGACGCGAAAATTCGCGTCAAGATCGACCGGAGTCTCCATCTC
GCTTACAGCCTGACCCGCGAGAGACATGCCGGTTCGGCACCATCAGCTAA
CGCGAACAGTCCGGTCGCAAAGAACCAAGGACCATATGGTGCTGGCAACA
GCCCGAGGTCATCATCGCTGTCTTCATCGACGTCAACGTCGTCGAAATCG
GGCGACCACTGTGGACCCCTAGTCGTCAATGGGTCCAACACGGGAACCAA
GGCAGTGGCTACTTAGATAGGCTTTCTACCAACGGCTGGGAAGGCCAGAG
CCTTGTTGTCACTTTAGCACGAACCAGCTCACCTACACGACCAATTGCTG
GGCCCACGAAGAGTCCAACCTGCGTAATTCCGCCCAACTATGTACCAGGC
TACTCAACTCCGCCACGATCAACACAAAACATGGCAGTGCCTCCGTCTCC
CATTTCCCCCGAATACCGGCGCACTGTCGTTGGCAAGAGCTCAAGGACCT
AGTCCGCCAGACAGCCTTACATATCCGTCAAGCAGTGGTCTACGATGACC
AGCATGGATTCCCAACCGGTCTTGGACAGATCATCGTGAAGAACGAAGAC
GAAGCATGGAGGACCTACCATGCCTTTCCCTCCACGCGAGAAGGGGCGGA
TGGCAAAATCTGGAAGGTCAGAAGAGGAATTTGTTCTATTCCTCCAGGGG
ACCTATCTTGTCTGCCAGTCCAAGCTGCCCGACATATCCAGCCACTGATT
ACGGCCCCATGGTCAATCCCCTAGCAATGCCTCAACAGCCTTTCATGCCT
TTCCCCACAGACCCAGTCACACAACAGCCCATATCAGGCATCCCGCCCTC
GCCCGCTCCTCTCCGCCACTCCTTCGGCGACGCTTTCGCTATTCCCGTCT
TCCCCGCATATCCTTTTCCGACCATGCCGCCGTTTCCTGATGCCCCAGCA
CATGGCGGTTTTAGTCTACCCGGACGTCGGGCCCACATGTCCGGCAAAGC
TTCCTACGGCTACAATCCGGCGTTCGCGCCGCAGATCTACCATTCCGGGG
GCCCAGGTCCCCGTTCTTCCCCACGACGAACTATATTCGTGCAGAATCTC
AGTCCCACCACGACCGACAAGCTCCTTCGCGCCTTCATAGAAGAAAGTGG
CGCCACAGTGGAGCAATCCGAGGTGTCCACGGATCCCGACACCGGCCGCT
GTAAAGGCTTCGCACGGGTAACCCTACGCACAGCAGATGAAGCCAAGCGT
GTTGTAGCGCAGTACAACGGCATCAACTTTATGGACGCGAAAATTCGCGT
CAAGATCGACCGGAGTCTCCATCTCGCTTACAGCCTGACCCGCGAGAGAC
ATGCCGGTTCGGCACCATCAGCTAACGCGAACAGTCCGGTCGCAAAGAAC
CAAGGACCATATGGTGCTGGCAACAGCCCGAGGTCATCATCGCTGTCTTC
ATCGACGTCAACGTCGTCGAAATCGGGCGACCACTGTGGACCCCTAGTCG
TCAATGGGTCCAACACGGGAACCAAGGCAGTGGCTACTTAGATAGGCTTT
CTACCAACGGCTGGGAAGGCCAGAGCCTTGTTGTCACTTTAGCACGAACC
AGCTCACCTACACGACCAATTGCTGGGCCCACGAAGAGTCCAACCTGCGT
AATTCCGCCCAACTATGTACCAGGCTACTCAACTCCGCCACGATCAACAC
AAAACATGGCAGTGCCTCCGTCTCCCATTTCCCCCGAATACCGGCGCACT
GTCGTTGGCAAGAGCTCAAGGACCTAGTCCGCCAGACAGCCTTACATATC
CGTCAAGCAGTGGTCTACGATGACCAGCATGGATTCCCAACCGGTCTTGG
ACAGATCATCGTGAAGAACGAAGACGAAGCATGGAGGACCTACCATGCCT
TTCCCTCCACGCGAGAAGGGGCGGATGGCAAAATCTGGAAGGTCAGAAGA
GGAATTTGTTCTATTCCTCCAGGGGACCTATCTTGTCTGCCAGTCCAAGC
TGCCCGACATATCCAGCCACTGATTACGGCCCCATGGTCAATCCCCTAGC
AATGCCTCAACAGCCTTTCATGCCTTTCCCCACAGACCCAGTCACACAAC
AGCCCATATCAGGCATCCCGCCCTCGCCCGCTCCTCTCCGCCACTCCTTC
GGCGACGCTTTCGCTATTCCCGTCTTCCCCGCATATCCTTTTCCGACCAT
GCCGCCGTTTCCTGATGCCCCAGCACATGGCGGTTTTAGTCTACCCGGAC
GTCGGGCCCACATGTCCGGCAAAGCTTCCTACGGCTACAATCCGGCGTTC
GCGCCGCAGATCTACCATTCCGGGGGCCCAGGTCCCCGTTCTTCCCCACG
ACGAACTATATTCGTGCAGAATCTCAGTCCCACCACGACCGACAAGCTCC
TTCGCGCCTTCATAGAAGAAAGTGGCGCCACAGTGGAGCAATCCGAGGTG
TCCACGGATCCCGACACCGGCCGCTGTAAAGGCTTCGCACGGGTAACCCT
ACGCACAGCAGATGAAGCCAAGCGTGTTGTAGCGCAGTACAACGGCATCA
ACTTTATGGACGCGAAAATTCGCGTCAAGATCGACCGGAGTCTCCATCTC
GCTTACAGCCTGACCCGCGAGAGACATGCCGGTTCGGCACCATCAGCTAA
CGCGAACAGTCCGGTCGCAAAGAACCAAGGACCATATGGTGCTGGCAACA
GCCCGAGGTCATCATCGCTGTCTTCATCGACGTCAACGTCGTCGAAATCG
GGCGACCACTGTGGACCCCTAGTCGTCAATGGGTCCAACACGGGAACCAA
GGCAGTGGCTACTTAGATAGGCTTTCTACCAACGGCTGGGAAGGCCAGAG
CCTTGTTGTCACTTTAGCACGAACCAGCTCACCTACACGACCAATTGCTG
GGCCCACGAAGAGTCCAACCTGCGTAATTCCGCCCAACTATGTACCAGGC
TACTCAACTCCGCCACGATCAACACAAAACATGGCAGTGCCTCCGTCTCC
CATTTCCCCCGAATACCGGCGCACTGTCGTTGGCAAGAGCTCAAGGACCT
AGTCCGCCAGACAGCCTTACATATCCGTCAAGCAGTGGTCTACGATGACC
AGCATGGATTCCCAACCGGTCTTGGACAGATCATCGTGAAGAACGAAGAC
GAAGCATGGAGGACCTACCATGCCTTTCCCTCCACGCGAGAAGGGGCGGA
TGGCAAAATCTGGAAGGTCAGAAGAGGAATTTGTTCTATTCCTCCAGGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010228KJC3_010228Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010228-T1KJC3_010228-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010228-T1.cdsKJC3_010228-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010228-T1.utr3p1KJC3_010228-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010228-T1.exon6KJC3_010228-T1.exon6Aspergillus niger KJC3exon
KJC3_010228-T1.exon5KJC3_010228-T1.exon5Aspergillus niger KJC3exon
KJC3_010228-T1.exon4KJC3_010228-T1.exon4Aspergillus niger KJC3exon
KJC3_010228-T1.exon3KJC3_010228-T1.exon3Aspergillus niger KJC3exon
KJC3_010228-T1.exon2KJC3_010228-T1.exon2Aspergillus niger KJC3exon
KJC3_010228-T1.exon1KJC3_010228-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010228-T1.utr5p3KJC3_010228-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_010228-T1.utr5p2KJC3_010228-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_010228-T1.utr5p1KJC3_010228-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2759545..2762296 -
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