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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2784098..2786029+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010234-T1 ID=KJC3_010234-T1|Name=KJC3_010234-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1932bp|location=Sequence derived from alignment at ch7:2784098..2786029+ (Aspergillus niger KJC3)
GCCTCGAATTCTCAGCCTCCACCTCGATTGCTGCTCGCAATTGAAAATGC
AGACCCTACAGGACCGAGCGGACATCACCGCTCGTCTCTATGCTGACCCC
CACAATCCGCACCTTTACTACAAACGAGGCCTTGTCCACCAAACCCTGGG
CTTTCCCGATCTCGCATCCGCCGACGCATACCGCGCCCTCTCCCTGCTCG
ACTCGGTCGTCGATCCCGATGGCTGCGAGTTTCACGCCACACGGCGGATT
CAGGATGCACCAGATACTCCCGCAACAACTGAGGAGGAGGGGGACGACGA
CGAGGATGACAATTTCACTCCCATCACACAAGATGAGTACGACTCCATAA
TCGGAGACGTCTACGCCCTTCTTGTGCGCAACTTGGTCGACTGCGGCTGT
TTCCGCGATGCCTTTGAGTTCTGCGTGCGTGGACAGGGGCTCCTAGAGGA
CATGTCGCAGAAGGAGCGCAATACCTCTGCGCAAGCTGTGCTCAAGGACC
AGCTGGCCATCATCCGGAAGAACTACGAAGCCCGTCAAGGAACCACCACC
GGAGACGCCAATATCAACCCTAGTGCTCTGAACGCCCAAGGCTTCGCCCG
CCGAGTCCTCTATCCCTGGAACGAGCACGAACCGGACCGCAAGTCCCCCG
AGACTTTGCAGCTCCTAAACGAGCGCCTCAAGGACGTTGCGCCTAAATGC
GAAGTCCGCGCCGTCGCCTTGCCCGCTTTACACGGCACCACCACCACCGA
AGACGAAGTCTCTGTCCAACTCGGCCTCTTCGCCAAAGAAGACATCGCCC
CCAACGAGATCATCCTCCGCGAATCCTCCCTCCTCACCGCTACCAACCGC
CTGCACGACGACCTCTGCGACGCCTGCAACGCCCCTCTCCCTGATCTCTC
CTCTCCCAACCCCCCCGTCGCCTGCGACGGCTGCGCAGATACCATCTTCT
GCTCGCAGGCCTGCCACGACGACGCACAGCGCATCTACCACGGCGCCGTC
TGCGGCCTCATGGAGAACCTCGAATCCATCGGAAAAGACATCCCCGACCC
CAAGGACAAGGCTGATTACCTCTACCTCCTTCTTCTGGGCCGCACGCTCG
CCATGGCCGCTACCCAGGAGCTGCACCCGCTCGATCTCCCTGAAGTGAAA
TACATCTGGGGCGATTTCCACGACCTCGACCTTAACACCAATGAAAGCAG
CAATGACAATGAAGACCCAACAGCAACCCTCCCCTTTTCCTTCCAGCTCA
ATATCCTCCAACCAATGCGTTTCCTAGAAGAAATGGAAATAGACCCCTAC
GTTGCCCTCCCCCGCTTCGACACCTGGGTCCTGAATACCCTGTACGCTAA
GTTCCGGGGCACTGCGTCGGGCCGGCTCTCGACGTGGGACGGTGGCCCGG
AGCTCTGTGCTGTGCACCCGCTTTGGTGTCTGGCGAACCATTCTTGTGAT
CCGAATGTCAGGTGGGAGTGGGGCGGGGAGATTACGTTCCGGGCTAGGGA
GGAGAGTGAACGGGCGGTTTGGAAGAGGGTTAAGGGTGCTGGTGGTGGTG
GGGATGAGGTTCCTGGGGGAAGAAGGAGACAGGAGGCGGGGATAAAGAAG
GATGAGGAGATTCTCAATCATTATTGTGATATTGGGTTGGATGTCAAGGA
GAGGAGGGAATGGGCGAGGGGCGCGTTGGGGGGTTGGTGTTTGTGTGAGA
GGTGTGTTTGGGAGGCGGGGGAGAAGTGATTGTTCGGTGTTAGTTTGAGG
AGTGTGGTTGGTTTGTGGATAGAGGACTTTGGGGTTGGTGGTTTTGGGAG
TTGGAGATGAACATAGAGATAGATATTAGATATAGTGGTGGATGATGATG
ATGATGACGATGAATAGATAGAGATACCCAGGTCGATGAAAAGAGAGAGA
TGATGTGGATGCTATTATGTCTCTATTGAAAC back to topCoding sequence (CDS) from alignment at ch7:2784098..2786029+ >KJC3_010234-T1 ID=KJC3_010234-T1|Name=KJC3_010234-T1|organism=Aspergillus niger KJC3|type=CDS|length=1683bp|location=Sequence derived from alignment at ch7:2784098..2786029+ (Aspergillus niger KJC3)
ATGCAGACCCTACAGGACCGAGCGGACATCACCGCTCGTCTCTATGCTGA
CCCCCACAATCCGCACCTTTACTACAAACGAGGCCTTGTCCACCAAACCC
TGGGCTTTCCCGATCTCGCATCCGCCGACGCATACCGCGCCCTCTCCCTG
CTCGACTCGGTCGTCGATCCCGATGGCTGCGAGTTTCACGCCACACGGCG
GATTCAGGATGCACCAGATACTCCCGCAACAACTGAGGAGGAGGGGGACG
ACGACGAGGATGACAATTTCACTCCCATCACACAAGATGAGTACGACTCC
ATAATCGGAGACGTCTACGCCCTTCTTGTGCGCAACTTGGTCGACTGCGG
CTGTTTCCGCGATGCCTTTGAGTTCTGCGTGCGTGGACAGGGGCTCCTAG
AGGACATGTCGCAGAAGGAGCGCAATACCTCTGCGCAAGCTGTGCTCAAG
GACCAGCTGGCCATCATCCGGAAGAACTACGAAGCCCGTCAAGGAACCAC
CACCGGAGACGCCAATATCAACCCTAGTGCTCTGAACGCCCAAGGCTTCG
CCCGCCGAGTCCTCTATCCCTGGAACGAGCACGAACCGGACCGCAAGTCC
CCCGAGACTTTGCAGCTCCTAAACGAGCGCCTCAAGGACGTTGCGCCTAA
ATGCGAAGTCCGCGCCGTCGCCTTGCCCGCTTTACACGGCACCACCACCA
CCGAAGACGAAGTCTCTGTCCAACTCGGCCTCTTCGCCAAAGAAGACATC
GCCCCCAACGAGATCATCCTCCGCGAATCCTCCCTCCTCACCGCTACCAA
CCGCCTGCACGACGACCTCTGCGACGCCTGCAACGCCCCTCTCCCTGATC
TCTCCTCTCCCAACCCCCCCGTCGCCTGCGACGGCTGCGCAGATACCATC
TTCTGCTCGCAGGCCTGCCACGACGACGCACAGCGCATCTACCACGGCGC
CGTCTGCGGCCTCATGGAGAACCTCGAATCCATCGGAAAAGACATCCCCG
ACCCCAAGGACAAGGCTGATTACCTCTACCTCCTTCTTCTGGGCCGCACG
CTCGCCATGGCCGCTACCCAGGAGCTGCACCCGCTCGATCTCCCTGAAGT
GAAATACATCTGGGGCGATTTCCACGACCTCGACCTTAACACCAATGAAA
GCAGCAATGACAATGAAGACCCAACAGCAACCCTCCCCTTTTCCTTCCAG
CTCAATATCCTCCAACCAATGCGTTTCCTAGAAGAAATGGAAATAGACCC
CTACGTTGCCCTCCCCCGCTTCGACACCTGGGTCCTGAATACCCTGTACG
CTAAGTTCCGGGGCACTGCGTCGGGCCGGCTCTCGACGTGGGACGGTGGC
CCGGAGCTCTGTGCTGTGCACCCGCTTTGGTGTCTGGCGAACCATTCTTG
TGATCCGAATGTCAGGTGGGAGTGGGGCGGGGAGATTACGTTCCGGGCTA
GGGAGGAGAGTGAACGGGCGGTTTGGAAGAGGGTTAAGGGTGCTGGTGGT
GGTGGGGATGAGGTTCCTGGGGGAAGAAGGAGACAGGAGGCGGGGATAAA
GAAGGATGAGGAGATTCTCAATCATTATTGTGATATTGGGTTGGATGTCA
AGGAGAGGAGGGAATGGGCGAGGGGCGCGTTGGGGGGTTGGTGTTTGTGT
GAGAGGTGTGTTTGGGAGGCGGGGGAGAAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010234-T1.utr5p1 | KJC3_010234-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010234-T1.utr3p1 | KJC3_010234-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002893 |
| DBxref | InterPro:IPR001214 |
| DBxref | PFAM:PF00856 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2784098..2786029 + |
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