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KJC3_010242-T1, KJC3_010242-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010242-T1
Unique NameKJC3_010242-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2807721..2808837+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010242-T1 ID=KJC3_010242-T1|Name=KJC3_010242-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1117bp|location=Sequence derived from alignment at ch7:2807721..2808837+ (Aspergillus niger KJC3)
ATGGCGGACGCTCAATTCGATAGTGCGCTGTAAGTGTTATGGCTCTGTTT
TTGTTTCAAGACTATGAAGCCTGCATAGCCTCTGGGTGCAATCATTCCAC
GCGGTCAACCCCGCTTGTTGCCTCCCGCTGACTATCATACCTGCTTCCAG
GGACCTGCTCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGG
CAATCACCTCCATCGTCCCCGACCTGACCGAAGACCTGCTCTCCTCTGTC
GATCAGCCTCTAGAAATCCGCAAGTGCCCCAAGACAGACCGCGACTACCT
CCTCTGTGACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCA
ATGAATTCGATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAAAGAGTG
AGAAAGCTTGAGGTCGCCGCCAACGAGGCTTTCGATGTCTACCGGGAGCT
GTACTACGAGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATG
GATTCGCTGGCGTTATCCTATTGAAGAAGGGTGAGCGAGTGATGTCTTGA
TACTTTCAGGCTGGAAATACGTGCTGATATCTCGCCATTATAGGAGTTAC
GCCAGGTGCTAAGAGCTCTGGGGAGTGGGACAGTATCCACGTCTTCGAGG
CTACCGACAGAGCGCGCATGTCCCACTACAAGCTGACTAGCACCGTCATC
CTGCACTTGGCTAATGAAACTGAGGCTTTGGGTGAGATGGACCTGAGTGG
TAACATGACCCGCCAGGTGGAGGTGGATCTTCCCGTCGAGTCGGATGCGA
GCCACGTCGCCAATGTTGGTCGACTTGTTGAGGACATGGAGTTGAAGATG
AGGAACTTGCTGCGTATGTCTTTTTTCTTAGCTATTGTGGCGCGAGAGTT
GTTACATTTCTGGGCTGCTTGCTAATTGAAATGTCCTTACAGAGGAGGTA
TACTTCGGCAAGGCTAAGGATGTCGTGGGTGAACTTCGGAGTAAGTGCAG
TCTAACCAGCTGGTGGGCAATGCCAGACTAACAAGCGAAACAGGTCTCCC
CTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCTGGAGATGATCC
GGTCTATGCACAGCTAG
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Coding sequence (CDS) from alignment at ch7:2807721..2808837+

>KJC3_010242-T1 ID=KJC3_010242-T1|Name=KJC3_010242-T1|organism=Aspergillus niger KJC3|type=CDS|length=4005bp|location=Sequence derived from alignment at ch7:2807721..2808837+ (Aspergillus niger KJC3)
ATGGCGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCCTCAA
CCCCCGCGACACGAAGCAAAACCTCCAGGCAATCACCTCCATCGTCCCCG
ACCTGACCGAAGACCTGCTCTCCTCTGTCGATCAGCCTCTAGAAATCCGC
AAGTGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACCGCGA
CGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCGTTGG
AAGACGGAACTGTTCCCAGTGAAAGAGTGAGAAAGCTTGAGGTCGCCGCC
AACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAGTAGG
CAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATCCTAT
TGAAGAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGACAGT
ATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACAAGCT
GACTAGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTGGGTG
AGATGGACCTGAGTGGTAACATGACCCGCCAGGTGGAGGTGGATCTTCCC
GTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTGAGGA
CATGGAGTTGAAGATGAGGAACTTGCTGCAGGAGGTATACTTCGGCAAGG
CTAAGGATGTCGTGGGTGAACTTCGGAGTCTCCCCTCCTTGTCCGAGTCG
AACAGAGATCGGGCTACCCACCTGGAGATGATCCGGTCTATGCACAGCTA
GATGGCGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCCTCA
ACCCCCGCGACACGAAGCAAAACCTCCAGGCAATCACCTCCATCGTCCCC
GACCTGACCGAAGACCTGCTCTCCTCTGTCGATCAGCCTCTAGAAATCCG
CAAGTGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACCGCG
ACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCGTTG
GAAGACGGAACTGTTCCCAGTGAAAGAGTGAGAAAGCTTGAGGTCGCCGC
CAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAGTAG
GCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATCCTA
TTGAAGAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGACAG
TATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACAAGC
TGACTAGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTGGGT
GAGATGGACCTGAGTGGTAACATGACCCGCCAGGTGGAGGTGGATCTTCC
CGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTGAGG
ACATGGAGTTGAAGATGAGGAACTTGCTGCAGGAGGTATACTTCGGCAAG
GCTAAGGATGTCGTGGGTGAACTTCGGAGTCTCCCCTCCTTGTCCGAGTC
GAACAGAGATCGGGCTACCCACCTGGAGATGATCCGGTCTATGCACAGCT
AGATGGCGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCCTC
AACCCCCGCGACACGAAGCAAAACCTCCAGGCAATCACCTCCATCGTCCC
CGACCTGACCGAAGACCTGCTCTCCTCTGTCGATCAGCCTCTAGAAATCC
GCAAGTGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACCGC
GACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCGTT
GGAAGACGGAACTGTTCCCAGTGAAAGAGTGAGAAAGCTTGAGGTCGCCG
CCAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAGTA
GGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATCCT
ATTGAAGAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGACA
GTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACAAG
CTGACTAGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTGGG
TGAGATGGACCTGAGTGGTAACATGACCCGCCAGGTGGAGGTGGATCTTC
CCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTGAG
GACATGGAGTTGAAGATGAGGAACTTGCTGCAGGAGGTATACTTCGGCAA
GGCTAAGGATGTCGTGGGTGAACTTCGGAGTCTCCCCTCCTTGTCCGAGT
CGAACAGAGATCGGGCTACCCACCTGGAGATGATCCGGTCTATGCACAGC
TAGATGGCGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCCT
CAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATCACCTCCATCGTCC
CCGACCTGACCGAAGACCTGCTCTCCTCTGTCGATCAGCCTCTAGAAATC
CGCAAGTGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACCG
CGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCGT
TGGAAGACGGAACTGTTCCCAGTGAAAGAGTGAGAAAGCTTGAGGTCGCC
GCCAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAGT
AGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATCC
TATTGAAGAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGAC
AGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACAA
GCTGACTAGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTGG
GTGAGATGGACCTGAGTGGTAACATGACCCGCCAGGTGGAGGTGGATCTT
CCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTGA
GGACATGGAGTTGAAGATGAGGAACTTGCTGCAGGAGGTATACTTCGGCA
AGGCTAAGGATGTCGTGGGTGAACTTCGGAGTCTCCCCTCCTTGTCCGAG
TCGAACAGAGATCGGGCTACCCACCTGGAGATGATCCGGTCTATGCACAG
CTAGATGGCGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCC
TCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATCACCTCCATCGTC
CCCGACCTGACCGAAGACCTGCTCTCCTCTGTCGATCAGCCTCTAGAAAT
CCGCAAGTGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACC
GCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCG
TTGGAAGACGGAACTGTTCCCAGTGAAAGAGTGAGAAAGCTTGAGGTCGC
CGCCAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAG
TAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATC
CTATTGAAGAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGA
CAGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACA
AGCTGACTAGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTG
GGTGAGATGGACCTGAGTGGTAACATGACCCGCCAGGTGGAGGTGGATCT
TCCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTG
AGGACATGGAGTTGAAGATGAGGAACTTGCTGCAGGAGGTATACTTCGGC
AAGGCTAAGGATGTCGTGGGTGAACTTCGGAGTCTCCCCTCCTTGTCCGA
GTCGAACAGAGATCGGGCTACCCACCTGGAGATGATCCGGTCTATGCACA
GCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0008290F-actin capping protein complex
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: Biological Process
TermDefinition
GO:0030036actin cytoskeleton organization
GO:0051016barbed-end actin filament capping
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAP2KJC3_010242Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010242-T1KJC3_010242-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010242-T1.exon1KJC3_010242-T1.exon1Aspergillus niger KJC3exon
KJC3_010242-T1.exon2KJC3_010242-T1.exon2Aspergillus niger KJC3exon
KJC3_010242-T1.exon3KJC3_010242-T1.exon3Aspergillus niger KJC3exon
KJC3_010242-T1.exon4KJC3_010242-T1.exon4Aspergillus niger KJC3exon
KJC3_010242-T1.exon5KJC3_010242-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010242-T1.cdsKJC3_010242-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR037282
DBxrefInterPro:IPR019771
DBxrefInterPro:IPR043175
DBxrefInterPro:IPR042276
DBxrefInterPro:IPR001698
DBxrefPFAM:PF01115
ProductF-actin-capping protein subunit beta
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2807721..2808837 +
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