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KJC3_010249-T1, KJC3_010249-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010249-T1
Unique NameKJC3_010249-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2823375..2824142-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010249-T1 ID=KJC3_010249-T1|Name=KJC3_010249-T1|organism=Aspergillus niger KJC3|type=mRNA|length=768bp|location=Sequence derived from alignment at ch7:2823375..2824142- (Aspergillus niger KJC3)
ATGACGGCGGACGTGAGCCATGCAGCATCACGCGTGCTCACCTCCAACAG
CCCCCGCGACCCGAGCTATGATGAGTTCTCCTTCGTACCCTTCCTCCGCC
AGAGCTATGGCTTCGGCCTTGCCAGTGATGTGCCCGTCTGCAAAGCCTAC
AGCGAAGGCCACTGCCCTCTAGGACCAGCCTGTCCCGATCGCCACCCAAC
CCCATCGCGTGTCACCACGTCGACCACCACCGCGTCGGGACTAGCACCAT
CAACCACACATGGATCTCTGGTCTGTAAACATTTCCTCAAGGGACTCTGC
AAGAAGGGTCTCAAGTGCGAGTATCTTCATGAATACAACCTCCGTCGCAT
GCCCGAATGCCAGTCCTTCTCGCGGTCCGGCTATTGTCCCAATGGCGATG
ACTGCCTGTATCAGCACGTGCGGGAGCAGGCGCGTCTGCCCCCTTGTGAA
CACTACGACCGGGGATTCTGCGAGCTGGGACCCCTGTGTGCCAAGCGGCA
TGTTCGTCGGCGCTTGTGTCAATACTACTTGGCTGGGTTCTGTCCGGACG
GCAAGGCCTGCGTGGATGCTCACCCCCGGTGGTCGGAGAACCTTCCCCGT
CCGCAGATCCGGGTCGAGAAGACCGAAGAAGAGCTGGAACGGGAACGGGC
GTTAATTCGGGAGGAACAGGAGAAGGAGAAGGAGCGTGAGAGGGAGTGGA
GGAGTGAGCGTGGTCGTGGTGGGGGGTTCATGCGGGGTCGGTACCGGGGG
CGTGGACGTGGACAGTAG
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Coding sequence (CDS) from alignment at ch7:2823375..2824142-

>KJC3_010249-T1 ID=KJC3_010249-T1|Name=KJC3_010249-T1|organism=Aspergillus niger KJC3|type=CDS|length=768bp|location=Sequence derived from alignment at ch7:2823375..2824142- (Aspergillus niger KJC3)
ATGACGGCGGACGTGAGCCATGCAGCATCACGCGTGCTCACCTCCAACAG
CCCCCGCGACCCGAGCTATGATGAGTTCTCCTTCGTACCCTTCCTCCGCC
AGAGCTATGGCTTCGGCCTTGCCAGTGATGTGCCCGTCTGCAAAGCCTAC
AGCGAAGGCCACTGCCCTCTAGGACCAGCCTGTCCCGATCGCCACCCAAC
CCCATCGCGTGTCACCACGTCGACCACCACCGCGTCGGGACTAGCACCAT
CAACCACACATGGATCTCTGGTCTGTAAACATTTCCTCAAGGGACTCTGC
AAGAAGGGTCTCAAGTGCGAGTATCTTCATGAATACAACCTCCGTCGCAT
GCCCGAATGCCAGTCCTTCTCGCGGTCCGGCTATTGTCCCAATGGCGATG
ACTGCCTGTATCAGCACGTGCGGGAGCAGGCGCGTCTGCCCCCTTGTGAA
CACTACGACCGGGGATTCTGCGAGCTGGGACCCCTGTGTGCCAAGCGGCA
TGTTCGTCGGCGCTTGTGTCAATACTACTTGGCTGGGTTCTGTCCGGACG
GCAAGGCCTGCGTGGATGCTCACCCCCGGTGGTCGGAGAACCTTCCCCGT
CCGCAGATCCGGGTCGAGAAGACCGAAGAAGAGCTGGAACGGGAACGGGC
GTTAATTCGGGAGGAACAGGAGAAGGAGAAGGAGCGTGAGAGGGAGTGGA
GGAGTGAGCGTGGTCGTGGTGGGGGGTTCATGCGGGGTCGGTACCGGGGG
CGTGGACGTGGACAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YTH1KJC3_010249Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010249-T1.cdsKJC3_010249-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010249-T1.exon1KJC3_010249-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010249-T1KJC3_010249-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092654KW
DBxrefInterPro:IPR036855
DBxrefInterPro:IPR000571
DBxrefPFAM:PF00642
ProductRNA-binding component of cleavage and polyadenylation factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2823375..2824142 -
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