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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2831771..2835783- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010252-T2 ID=KJC3_010252-T2|Name=KJC3_010252-T2|organism=Aspergillus niger KJC3|type=mRNA|length=4013bp|location=Sequence derived from alignment at ch7:2831771..2835783- (Aspergillus niger KJC3)
CCCCCCCGCTCGCCTCACCTCCCTCCCTCCCTCTCCCCTCTCTCCCTCCC
TCCGCAATGCTTGTTCATGGTCTCTTTGTGTGACGACTCTTGAACTGTCA
ACTAGTTGATTGTTCAACTGCCTTATCACTCCCTCTGTACTACTCATATA
GTGGTAGTAGTAAGTAGTGACTGTTATCCGCCGGGAAAACCACCCTCACT
TTATCACACCACAATCCACACCAATTGGGTGCCGTTTCCCTTCCGGCTCT
TCAGTTCTAGTACCGGCCTCACCCATCCACATACACCTTCCACCTATTAT
CTACTGTTCGGAGCTGTTCGTTCGCTTCTTTTCTCTTCTACACCCTCTTG
CTTATCTTACTCACTGGGGCTGTCATTCCTTTGTGTCTTCCGCCCCCTCC
TTCTGTCCGCACCCTGTCAGCTGTGCAGTACTTCGAAGACTGTTCTTGCG
CGCCTCCGGCTTACCAGTGTTTGTGCAGAGCATCAAGCGCTGCCGACTCC
TTCCCCCCCATTCCAACTCCCGTCATCCCACATTCTTCATGCAACGCGAT
TGAACAATCGAACCCCTCGCTCGTCCTTAGTGGTTTAATGATTTAATCGA
TTGGAACCTACGTGTGGTTCCTGTCTTGACCCCGGAAAACGAAACCGAAC
ATCCCTCTTTTTTTTGAACCAAGTCGACGAACCCTGGATAATAACCATGG
CCTCCCGGCCCAAGTTTGAACACCGCTCTCCCTCCCACGACGTCCTGCGC
AGCGGGGCTCCGTCCCCACGCATTGAGCATTATGATGGTGAAATTCCTCC
TGCGCTCTCCCCGCTCGATGCCTTCGCCGCCCAAGGTCGGCTCCTGGCTC
GTCAACTGGAGGAATCGGCACGAAGGAACCGGCGCATGAGCAGGCTACCT
CCATCTAGCGTCGCTCGTTCCCTCTCGCAACCTCGCCCTGGATATTTTCG
ATCCCCGTCGTCGAGCGATTCTTCTACTGGCGCAAGAGGTCACGGCGGAC
GCAATGAACTGTCAAGACAACCTACGCAGAAATTAAGCCCCGAGGTGGAG
GAACCCAAATTTCGCCCGCAGTCTGAACATCCTCGTCTGAGTGCGGTGTC
GCACCTTACCAGCGAAGTGGGAGATTACTCCGAGGACGAAGACACGACCC
CCAAAAAAGAGCCGAGCGTGAACGCCCTTGACCTGCCACGCGCCGAATCA
CCCGAGGATGCCATGTCCTCACACAGCGCACCCGAAGCTCCGCCGGAAGG
CCCTCCTCGGTTTTATGCTGTCTCCCCCACTGGCCTTACCCCGGGTGGCC
CGCCTCCTTCTCTGGGGGTCTCGATGGTGGCACCCTCTCGGACCTCTTCG
ACTGATTCTGTTTCTCGCTTGAACATTCCCCCACGAGGCCTAGCACCTCC
GGGATCGCCACTGTCTAGGCCTTCAAGTAGTTCTCGAGGAGTACAGCCTG
AGAGCTCCGACGACGACTACAGCAGCTCGAATGCCGGTTCGACGTTCTCA
AAGCCCCGGAAGATGTCCGCCAGCAGTGCCGTATCACTGCCATACTCTTC
GATGTCCTCTTCCGTAACACGCTCGCATCCCCGGTCGCCATCTATGAGCT
CCGAGACTTCAAACGCGGGTAATTACCTTCAACGGCCCTATAACTTCTCG
CGCCCCCTGAGCCGATCCAGCACGAGTCTCTCTGCCCCCGGTCCCAGGGC
CTCGCCGGAACCGCCCGTTGCCAATTCGCAAGGCGCGCTCAACCGTGGAC
ACAAGCCTAGTCCCATCGTGGTACCATCGCCATCAGACTTGCCCATCAAT
CCCAATGAAGACCCGTCTTCTGCTGTTTCTTGCTACACCTATGCCAAGTA
CGCACTGCCTCGAGGACGTGCAGTATCGAGAGATTCGGTGGTCTTCTCCG
GCCTCCAAACCCCTCATTTTGAGTGGCAGGAGCCGCTGTTTGAGAGCCCA
ACTCGGCACAGCACGGCGGGACCCCCGCAACCCGCAAGGACCCCGTCGCC
TTCCCCCTCCCTCCAGGGTTCGTTCCACTCGAAGACGCGCTCGATGTATG
AGTCTCCCGCTTCCGCTCGTCACTTGTTGACTCCGGAGCCCCCTCTGCCT
CAACAAACTCCGCCATCTCCGGAAGTCAGACCATCTCCAGCGACACCTGT
CGAGCCTGAGCCTGAGCCTTCTGTTGCGGAGCCCGCACCTACCGAGCCTG
AGCCTACCGAGCCTGTGCCTACCGAGGTCGCTCCCGCCGAAGATACTCCT
ACGGAACAACGGGAAGCAGAGGCTCCGAAGGTAGACCACACCGATGCCAC
TTCCTCTGCAGGTTCTGAATCCACCGTTCGTCCGCAAACCGCGCGAACAA
ACACGACAACATCGGCTGTAATTACTGCAGATGAGCATGTGACCAAGGGC
ATCGAATGCCATGAGAAAGGATCTTTGAATGAATCGACATATCACCTGCG
CATTGCAGCCAAGCAAAACCATCCGACCGGAATGTTACTTTATGCGCTGG
CTTGTCGACATGGCTGGGGTATGCGACCGAATCAGCGGGAGGGTGTGCAG
TGGTTGCGCAAGGCCGTGGATTCCGTTGGTATCGAATTGATGGACGATTC
AAACCCGACCATTCCCGCTCGCGCCAAGGAGCTACAGAAGGCTTATCGAG
CGCAGTTTGCCTTGAGTATCTACGAGCTTGGAGTAAGCCATCTGAATGGA
TGGGGTATCGAACAGGACAAGTCCCTGGCCTTGCGTTGCTTCGAGATCGC
GGGCCAATGGGGCGACGGCGATGCCCTAGCGGAGGCCGGCTTCTGCTACG
CCGAAGGTATTGGATGCAAAAAGGACCTGAAGAAAGCGGCGAAATTCTAC
CGGCAGGCGGAAGCGAAGGGCATCAGCATGGTTGGGAATAGTTGGTAAGT
TGCTCCACCGGGTCGGCTATGGTTGGGGTGGGTCTAACCGGGCTTTGATA
GGATCTACAAGGACAAGTACATGGACGAAGAGTCCAGCTCGAACTCGCGT
GGTCGGGCCCAACCTGGCAGCACTCCCGAGAAGAAACAGCGCAGCAAATC
CCGAACCCGCAGTCTTTTCCATCGAAAGAAGTCGGTTGCGACAGAAGCAT
GAACGGGTGTGCAGCACCCTTGTGGTCGACCCGAGGGCCTGCTTGCATCT
GCCATCTTGTTAGCAAAAAGAAAGGCGAAAGGCTTGTTCTACATTTGGTC
TTGGCATGCATTTCCATTGATATTCTTGTCCTTCCTCGACCATTCAGTGT
CTCTGGTCAGTATCAACACGCACCATGTGCTGCCGATTGAGGAAGATTTC
TCTAGTTGACTTTCGTTCCATTCGTTTGGACCCATCCGTGGGTTGCCTCT
CTTCTCTTTTCTTTGCTTTTCCTTTTTTTTTTACTTCGCATTTCGCGCTA
TTTCTTCACACCTTTCCTTTTTCTCCTTGAGCAGGCCTTGCTAGCTGCTC
CACATTTTGGGTCACCGGGTTGAGTGGCTCTCGCTTGACTTCGCGTTCCA
ATTTGCGGGCAGCGATATTCGTTTCTTGGATACCCATCATTTTCGAATCA
CTGTGTGATAATTCTTTTCTTCTCTTTTGGAACTTAACACTATTCCCCCC
TTCCTTCGTTCTGTGGTTCTTCCCTCTATAACCATTTTCATTTCTCCACT
TGTTTTTCTCTTACTTCTTTTCTTCTTTTTATTTACCGTGGACGCTTGTC
CATGTTCGATCGTTGGGATCTCTTCCATTATCTTTCTTTTTTGACTCCTG
TAATACCATTCTTTCCATTTCTTCTTAGAGATAGCCGTGTGTTTTGTGTC
GACCGAGATCATACCTGATGATACTCACGAGGAATTGCTACATAATTGGA
TGTTCATCCATCAATGATGGATAGAGTTTTGGATATGCTTCTGAATACCT
CAGCCACTGAGAAGTTAGTAGTGTTTGCTGTTCCAGCGTGATCAAACCAA
GTCCTCCAGTGGCGACGAACCACTGGGGGGAGAGATGAGACAAGAAGACA
AGTAAATACTCGG back to topCoding sequence (CDS) from alignment at ch7:2831771..2835783- >KJC3_010252-T2 ID=KJC3_010252-T2|Name=KJC3_010252-T2|organism=Aspergillus niger KJC3|type=CDS|length=2202bp|location=Sequence derived from alignment at ch7:2831771..2835783- (Aspergillus niger KJC3)
ATGGCCTCCCGGCCCAAGTTTGAACACCGCTCTCCCTCCCACGACGTCCT
GCGCAGCGGGGCTCCGTCCCCACGCATTGAGCATTATGATGGTGAAATTC
CTCCTGCGCTCTCCCCGCTCGATGCCTTCGCCGCCCAAGGTCGGCTCCTG
GCTCGTCAACTGGAGGAATCGGCACGAAGGAACCGGCGCATGAGCAGGCT
ACCTCCATCTAGCGTCGCTCGTTCCCTCTCGCAACCTCGCCCTGGATATT
TTCGATCCCCGTCGTCGAGCGATTCTTCTACTGGCGCAAGAGGTCACGGC
GGACGCAATGAACTGTCAAGACAACCTACGCAGAAATTAAGCCCCGAGGT
GGAGGAACCCAAATTTCGCCCGCAGTCTGAACATCCTCGTCTGAGTGCGG
TGTCGCACCTTACCAGCGAAGTGGGAGATTACTCCGAGGACGAAGACACG
ACCCCCAAAAAAGAGCCGAGCGTGAACGCCCTTGACCTGCCACGCGCCGA
ATCACCCGAGGATGCCATGTCCTCACACAGCGCACCCGAAGCTCCGCCGG
AAGGCCCTCCTCGGTTTTATGCTGTCTCCCCCACTGGCCTTACCCCGGGT
GGCCCGCCTCCTTCTCTGGGGGTCTCGATGGTGGCACCCTCTCGGACCTC
TTCGACTGATTCTGTTTCTCGCTTGAACATTCCCCCACGAGGCCTAGCAC
CTCCGGGATCGCCACTGTCTAGGCCTTCAAGTAGTTCTCGAGGAGTACAG
CCTGAGAGCTCCGACGACGACTACAGCAGCTCGAATGCCGGTTCGACGTT
CTCAAAGCCCCGGAAGATGTCCGCCAGCAGTGCCGTATCACTGCCATACT
CTTCGATGTCCTCTTCCGTAACACGCTCGCATCCCCGGTCGCCATCTATG
AGCTCCGAGACTTCAAACGCGGGTAATTACCTTCAACGGCCCTATAACTT
CTCGCGCCCCCTGAGCCGATCCAGCACGAGTCTCTCTGCCCCCGGTCCCA
GGGCCTCGCCGGAACCGCCCGTTGCCAATTCGCAAGGCGCGCTCAACCGT
GGACACAAGCCTAGTCCCATCGTGGTACCATCGCCATCAGACTTGCCCAT
CAATCCCAATGAAGACCCGTCTTCTGCTGTTTCTTGCTACACCTATGCCA
AGTACGCACTGCCTCGAGGACGTGCAGTATCGAGAGATTCGGTGGTCTTC
TCCGGCCTCCAAACCCCTCATTTTGAGTGGCAGGAGCCGCTGTTTGAGAG
CCCAACTCGGCACAGCACGGCGGGACCCCCGCAACCCGCAAGGACCCCGT
CGCCTTCCCCCTCCCTCCAGGGTTCGTTCCACTCGAAGACGCGCTCGATG
TATGAGTCTCCCGCTTCCGCTCGTCACTTGTTGACTCCGGAGCCCCCTCT
GCCTCAACAAACTCCGCCATCTCCGGAAGTCAGACCATCTCCAGCGACAC
CTGTCGAGCCTGAGCCTGAGCCTTCTGTTGCGGAGCCCGCACCTACCGAG
CCTGAGCCTACCGAGCCTGTGCCTACCGAGGTCGCTCCCGCCGAAGATAC
TCCTACGGAACAACGGGAAGCAGAGGCTCCGAAGGTAGACCACACCGATG
CCACTTCCTCTGCAGGTTCTGAATCCACCGTTCGTCCGCAAACCGCGCGA
ACAAACACGACAACATCGGCTGTAATTACTGCAGATGAGCATGTGACCAA
GGGCATCGAATGCCATGAGAAAGGATCTTTGAATGAATCGACATATCACC
TGCGCATTGCAGCCAAGCAAAACCATCCGACCGGAATGTTACTTTATGCG
CTGGCTTGTCGACATGGCTGGGGTATGCGACCGAATCAGCGGGAGGGTGT
GCAGTGGTTGCGCAAGGCCGTGGATTCCGTTGGTATCGAATTGATGGACG
ATTCAAACCCGACCATTCCCGCTCGCGCCAAGGAGCTACAGAAGGCTTAT
CGAGCGCAGTTTGCCTTGAGTATCTACGAGCTTGGAGTAAGCCATCTGAA
TGGATGGGGTATCGAACAGGACAAGTCCCTGGCCTTGCGTTGCTTCGAGA
TCGCGGGCCAATGGGGCGACGGCGATGCCCTAGCGGAGGCCGGCTTCTGC
TACGCCGAAGGTATTGGATGCAAAAAGGACCTGAAGAAAGCGGCGAAATT
CTACCGGCAGGCGGAAGCGAAGGGCATCAGCATGGTTGGGAATAGTTGGT
AA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010252-T2.utr3p1 | KJC3_010252-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR006597 |
| DBxref | PFAM:PF08238 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch7 | supercontig | ch7:2831771..2835783 - |
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